NLP5_ARATH
ID NLP5_ARATH Reviewed; 808 AA.
AC Q9SFW8; Q9SGQ2;
DT 30-NOV-2010, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 03-AUG-2022, entry version 115.
DE RecName: Full=Protein NLP5;
DE Short=AtNLP5;
DE AltName: Full=NIN-like protein 5;
DE AltName: Full=Nodule inception protein-like protein 5;
GN Name=NLP5; OrderedLocusNames=At1g76350; ORFNames=F15M4.15, T23E18.27;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Fujita M., Mizukado S., Seki M., Shinozaki K., Mitsuda N., Takiguchi Y.,
RA Takagi M.;
RT "ORF cloning and analysis of Arabidopsis transcription factor genes.";
RL Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=15785851; DOI=10.1007/s00239-004-0144-2;
RA Schauser L., Wieloch W., Stougaard J.;
RT "Evolution of NIN-like proteins in Arabidopsis, rice, and Lotus
RT japonicus.";
RL J. Mol. Evol. 60:229-237(2005).
CC -!- FUNCTION: Probable transcription factor. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00852}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAF17633.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AC009978; AAF17633.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AC012394; AAF16666.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE35827.1; -; Genomic_DNA.
DR EMBL; CP002684; ANM59494.1; -; Genomic_DNA.
DR EMBL; CP002684; ANM59495.1; -; Genomic_DNA.
DR EMBL; CP002684; ANM59496.1; -; Genomic_DNA.
DR EMBL; AB493537; BAH30375.1; -; mRNA.
DR PIR; A96791; A96791.
DR RefSeq; NP_001321849.1; NM_001334725.1.
DR RefSeq; NP_001321850.1; NM_001334724.1.
DR RefSeq; NP_001321851.1; NM_001334726.1.
DR RefSeq; NP_177761.1; NM_106284.5.
DR AlphaFoldDB; Q9SFW8; -.
DR SMR; Q9SFW8; -.
DR STRING; 3702.AT1G76350.1; -.
DR PaxDb; Q9SFW8; -.
DR PRIDE; Q9SFW8; -.
DR ProteomicsDB; 251137; -.
DR EnsemblPlants; AT1G76350.1; AT1G76350.1; AT1G76350.
DR EnsemblPlants; AT1G76350.2; AT1G76350.2; AT1G76350.
DR EnsemblPlants; AT1G76350.3; AT1G76350.3; AT1G76350.
DR EnsemblPlants; AT1G76350.4; AT1G76350.4; AT1G76350.
DR GeneID; 843967; -.
DR Gramene; AT1G76350.1; AT1G76350.1; AT1G76350.
DR Gramene; AT1G76350.2; AT1G76350.2; AT1G76350.
DR Gramene; AT1G76350.3; AT1G76350.3; AT1G76350.
DR Gramene; AT1G76350.4; AT1G76350.4; AT1G76350.
DR KEGG; ath:AT1G76350; -.
DR Araport; AT1G76350; -.
DR TAIR; locus:2014624; AT1G76350.
DR eggNOG; ENOG502QRQ2; Eukaryota.
DR HOGENOM; CLU_008971_0_0_1; -.
DR InParanoid; Q9SFW8; -.
DR OMA; TWIPCVQ; -.
DR OrthoDB; 210841at2759; -.
DR PhylomeDB; Q9SFW8; -.
DR PRO; PR:Q9SFW8; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9SFW8; baseline and differential.
DR Genevisible; Q9SFW8; AT.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; ISS:TAIR.
DR GO; GO:0000976; F:transcription cis-regulatory region binding; IPI:TAIR.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; TAS:TAIR.
DR GO; GO:0010167; P:response to nitrate; IEP:TAIR.
DR CDD; cd06407; PB1_NLP; 1.
DR InterPro; IPR045012; NLP.
DR InterPro; IPR000270; PB1_dom.
DR InterPro; IPR034891; PB1_NLP.
DR InterPro; IPR003035; RWP-RK_dom.
DR PANTHER; PTHR32002; PTHR32002; 1.
DR Pfam; PF00564; PB1; 1.
DR Pfam; PF02042; RWP-RK; 1.
DR SMART; SM00666; PB1; 1.
DR PROSITE; PS51745; PB1; 1.
DR PROSITE; PS51519; RWP_RK; 1.
PE 2: Evidence at transcript level;
KW DNA-binding; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..808
FT /note="Protein NLP5"
FT /id="PRO_0000401490"
FT DOMAIN 536..617
FT /note="RWP-RK"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00852"
FT DOMAIN 710..793
FT /note="PB1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01081"
FT REGION 56..83
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 660..680
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 660..677
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 808 AA; 90684 MW; FB49946380535266 CRC64;
MENNSLPMDP AMDSSFMDGL LLEGCWLETT DASEFLNFSP STSVAPFDPS SFMWSPTQDT
SNSLSQMYGQ DCPERSSLED QNQGRDLSTF NRRWWIGPSG HHGFSVMERL VQAVTHIKDF
TSERGSLIQL WVPVDRGGKR VLTTKEQPFS HDPMCQRLAH YREISENYQF STEQEDSDSS
SRDLVGLPGR VFLGKVPEWT PDVRFFKNEE YPRVQHAQDC DVRGTLAIPV FEQGSQICLG
VIEVVMTTQM VKLSPDLESI CRALQAVDLR STEIPIPPSL KGPDFSYQAA LPEIRNLLRC
ACETHKLPLA QTWVSCLKQS KTGCRHNDEN YIHCVSTIDD ACYVGDPTVR EFHEACSEHH
LLKGQGVVGE AFLTNGPCFS SDVSSYKKSE YPLSHHATMF GLHGTVAIRL RCIHTGSVDF
VLEFFLPKNC RDIEEQRKML NALSTIMAHV PRSLRTVTQK ELEEEGDSMV SEVIEKGVTL
PKIENTTEVH QSISTPQNVG LVFDGGTTEM GELGSEYGKG VSVNENNTFS SASGFNRVTE
KKRTKAEKNI TLDVLRQYFA GSLKDAAKSI GVCPTTLKRI CRQHGIQRWP SRKIKKVGHS
LQKIQRVIDS VEGVSGHHLP IGSFYASFPN LAASPEASSL QQQSKITTFL SYSHSPPAKS
PGSSCSHSSS CSSETQVIKE DPTDKTRLVS RSFKETQTTH LSPSSQEDDF LRVKVSYEEE
KIRFKMRNSH RLKDLLWEIA KRFSIEDVSR YDLKYLDEDN EWVLLRCDDD VEECVDVCRS
FPGQTIKLLL QLSSSYLPER SSVSGCLS
