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NLPD_SALTI
ID   NLPD_SALTI              Reviewed;         373 AA.
AC   Q56131;
DT   01-NOV-1997, integrated into UniProtKB/Swiss-Prot.
DT   05-DEC-2001, sequence version 2.
DT   25-MAY-2022, entry version 142.
DE   RecName: Full=Murein hydrolase activator NlpD;
DE   Flags: Precursor;
GN   Name=nlpD; OrderedLocusNames=STY3050, t2826;
OS   Salmonella typhi.
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC   Enterobacteriaceae; Salmonella.
OX   NCBI_TaxID=90370;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CT18;
RX   PubMed=11677608; DOI=10.1038/35101607;
RA   Parkhill J., Dougan G., James K.D., Thomson N.R., Pickard D., Wain J.,
RA   Churcher C.M., Mungall K.L., Bentley S.D., Holden M.T.G., Sebaihia M.,
RA   Baker S., Basham D., Brooks K., Chillingworth T., Connerton P., Cronin A.,
RA   Davis P., Davies R.M., Dowd L., White N., Farrar J., Feltwell T.,
RA   Hamlin N., Haque A., Hien T.T., Holroyd S., Jagels K., Krogh A.,
RA   Larsen T.S., Leather S., Moule S., O'Gaora P., Parry C., Quail M.A.,
RA   Rutherford K.M., Simmonds M., Skelton J., Stevens K., Whitehead S.,
RA   Barrell B.G.;
RT   "Complete genome sequence of a multiple drug resistant Salmonella enterica
RT   serovar Typhi CT18.";
RL   Nature 413:848-852(2001).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 700931 / Ty2;
RX   PubMed=12644504; DOI=10.1128/jb.185.7.2330-2337.2003;
RA   Deng W., Liou S.-R., Plunkett G. III, Mayhew G.F., Rose D.J., Burland V.,
RA   Kodoyianni V., Schwartz D.C., Blattner F.R.;
RT   "Comparative genomics of Salmonella enterica serovar Typhi strains Ty2 and
RT   CT18.";
RL   J. Bacteriol. 185:2330-2337(2003).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 255-373.
RC   STRAIN=Ty21a;
RX   PubMed=7705608; DOI=10.1111/j.1574-6968.1995.tb07412.x;
RA   Robbe-Saule V., Coynault C., Norel F.;
RT   "The live oral typhoid vaccine Ty21a is a rpoS mutant and is susceptible to
RT   various environmental stresses.";
RL   FEMS Microbiol. Lett. 126:171-176(1995).
RN   [4]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 269-373.
RC   STRAIN=ATCC 700931 / Ty2;
RX   PubMed=9919662; DOI=10.1111/j.1574-6968.1999.tb13366.x;
RA   Robbe-Saule V., Norel F.;
RT   "The rpoS mutant allele of Salmonella typhi Ty2 is identical to that of the
RT   live typhoid vaccine Ty21a.";
RL   FEMS Microbiol. Lett. 170:141-143(1999).
CC   -!- FUNCTION: Activator of the cell wall hydrolase AmiC. Required for
CC       septal murein cleavage and daughter cell separation during cell
CC       division (By similarity). {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000305}; Lipid-anchor
CC       {ECO:0000255|PROSITE-ProRule:PRU00303}. Note=Localizes at the septal
CC       ring. {ECO:0000250}.
CC   -!- SIMILARITY: Belongs to the E.coli NlpD/Haemophilus LppB family.
CC       {ECO:0000305}.
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DR   EMBL; AL513382; CAD06031.1; -; Genomic_DNA.
DR   EMBL; AE014613; AAO70383.1; -; Genomic_DNA.
DR   EMBL; X81641; CAA57297.1; -; Genomic_DNA.
DR   EMBL; Y17610; CAA76806.1; -; Genomic_DNA.
DR   RefSeq; NP_457314.1; NC_003198.1.
DR   RefSeq; WP_001272624.1; NZ_WSUR01000005.1.
DR   AlphaFoldDB; Q56131; -.
DR   SMR; Q56131; -.
DR   STRING; 220341.16503998; -.
DR   EnsemblBacteria; AAO70383; AAO70383; t2826.
DR   KEGG; stt:t2826; -.
DR   KEGG; sty:STY3050; -.
DR   PATRIC; fig|220341.7.peg.3102; -.
DR   eggNOG; COG1388; Bacteria.
DR   eggNOG; COG4942; Bacteria.
DR   HOGENOM; CLU_029425_0_1_6; -.
DR   OMA; TMFLIAY; -.
DR   Proteomes; UP000000541; Chromosome.
DR   Proteomes; UP000002670; Chromosome.
DR   GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0007049; P:cell cycle; IEA:UniProtKB-KW.
DR   GO; GO:0051301; P:cell division; IEA:UniProtKB-KW.
DR   CDD; cd00118; LysM; 1.
DR   Gene3D; 2.70.70.10; -; 1.
DR   Gene3D; 3.10.350.10; -; 1.
DR   InterPro; IPR011055; Dup_hybrid_motif.
DR   InterPro; IPR018392; LysM_dom.
DR   InterPro; IPR036779; LysM_dom_sf.
DR   InterPro; IPR016047; Peptidase_M23.
DR   Pfam; PF01476; LysM; 1.
DR   Pfam; PF01551; Peptidase_M23; 1.
DR   SMART; SM00257; LysM; 1.
DR   SUPFAM; SSF51261; SSF51261; 1.
DR   PROSITE; PS51782; LYSM; 1.
DR   PROSITE; PS51257; PROKAR_LIPOPROTEIN; 1.
PE   3: Inferred from homology;
KW   Cell cycle; Cell division; Cell inner membrane; Cell membrane; Lipoprotein;
KW   Membrane; Palmitate; Repeat; Signal.
FT   SIGNAL          1..25
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00303"
FT   CHAIN           26..373
FT                   /note="Murein hydrolase activator NlpD"
FT                   /id="PRO_0000018031"
FT   DOMAIN          115..159
FT                   /note="LysM"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01118"
FT   REPEAT          199..205
FT                   /note="1"
FT   REPEAT          221..227
FT                   /note="2"
FT   REPEAT          233..239
FT                   /note="3"
FT   REPEAT          240..246
FT                   /note="4"
FT   REGION          30..70
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          199..246
FT                   /note="4 X 7 AA approximate repeats"
FT   COMPBIAS        30..53
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   LIPID           26
FT                   /note="N-palmitoyl cysteine"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00303"
FT   LIPID           26
FT                   /note="S-diacylglycerol cysteine"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00303"
SQ   SEQUENCE   373 AA;  39183 MW;  DD075BB440098FF7 CRC64;
     MSAGSPKFTV SRIAALSLVS LWLAGCTSSS NPPAPVTSVD SGSSSNTNSG MLITPPPKMG
     ATPQQAPQIQ PVQRPVTQPM QTQPVTEQPV QMENGRIVYN RQYGNIPKGS YTGGSTYTVK
     KGDTLFYIAW ITGNDFRDLA QRNSISAPYS LNVGQTLQVG NASGTPITGG NAITQADAAQ
     QGVVTRSAQN STVAVASQPT ITYSEGSGEQ SANKMLPNNK PAGTVVTAPV TAPTVSTTEP
     NASSTSTSAP ISAWRWPTDG KVIENFGASE GGNKGIDIAG SKGQAIVATA DGRVVYAGNA
     LRGYGNLIII KHNDDYLSAY AHNDTMLVRE QQEVKAGQKI ATMGSTGTSS TRLHFEIRYK
     GKSVNPLRYL PQR
 
 
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