NNJA3_ORYSJ
ID NNJA3_ORYSJ Reviewed; 307 AA.
AC Q10JI3; A0A0P0VZQ0; Q75GD3;
DT 14-APR-2009, integrated into UniProtKB/Swiss-Prot.
DT 22-AUG-2006, sequence version 1.
DT 03-AUG-2022, entry version 76.
DE RecName: Full=Ninja-family protein Os03g0419100;
GN OrderedLocusNames=Os03g0419100, LOC_Os03g30570; ORFNames=OSJNBb0028K20.14;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16109971; DOI=10.1101/gr.3869505;
RG The rice chromosome 3 sequencing consortium;
RA Buell C.R., Yuan Q., Ouyang S., Liu J., Zhu W., Wang A., Maiti R., Haas B.,
RA Wortman J., Pertea M., Jones K.M., Kim M., Overton L., Tsitrin T.,
RA Fadrosh D., Bera J., Weaver B., Jin S., Johri S., Reardon M., Webb K.,
RA Hill J., Moffat K., Tallon L., Van Aken S., Lewis M., Utterback T.,
RA Feldblyum T., Zismann V., Iobst S., Hsiao J., de Vazeille A.R.,
RA Salzberg S.L., White O., Fraser C.M., Yu Y., Kim H., Rambo T., Currie J.,
RA Collura K., Kernodle-Thompson S., Wei F., Kudrna K., Ammiraju J.S.S.,
RA Luo M., Goicoechea J.L., Wing R.A., Henry D., Oates R., Palmer M.,
RA Pries G., Saski C., Simmons J., Soderlund C., Nelson W., de la Bastide M.,
RA Spiegel L., Nascimento L., Huang E., Preston R., Zutavern T., Palmer L.,
RA O'Shaughnessy A., Dike S., McCombie W.R., Minx P., Cordum H., Wilson R.,
RA Jin W., Lee H.R., Jiang J., Jackson S.;
RT "Sequence, annotation, and analysis of synteny between rice chromosome 3
RT and diverged grass species.";
RL Genome Res. 15:1284-1291(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the Ninja family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAR01695.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=ABF96649.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AC145386; AAR01695.1; ALT_SEQ; Genomic_DNA.
DR EMBL; DP000009; ABF96648.1; -; Genomic_DNA.
DR EMBL; DP000009; ABF96649.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AP008209; BAF12292.1; -; Genomic_DNA.
DR EMBL; AP014959; BAS84725.1; -; Genomic_DNA.
DR EMBL; AK073482; BAG93477.1; -; mRNA.
DR EMBL; AK119969; BAG99827.1; -; mRNA.
DR RefSeq; XP_015632575.1; XM_015777089.1.
DR AlphaFoldDB; Q10JI3; -.
DR STRING; 4530.OS03T0419100-01; -.
DR PaxDb; Q10JI3; -.
DR PRIDE; Q10JI3; -.
DR EnsemblPlants; Os03t0419100-01; Os03t0419100-01; Os03g0419100.
DR EnsemblPlants; Os03t0419100-02; Os03t0419100-02; Os03g0419100.
DR GeneID; 4333126; -.
DR Gramene; Os03t0419100-01; Os03t0419100-01; Os03g0419100.
DR Gramene; Os03t0419100-02; Os03t0419100-02; Os03g0419100.
DR KEGG; osa:4333126; -.
DR eggNOG; ENOG502QW6K; Eukaryota.
DR HOGENOM; CLU_034695_0_0_1; -.
DR InParanoid; Q10JI3; -.
DR OMA; FPRENHQ; -.
DR OrthoDB; 1469925at2759; -.
DR PlantReactome; R-OSA-6787011; Jasmonic acid signaling.
DR Proteomes; UP000000763; Chromosome 3.
DR Proteomes; UP000059680; Chromosome 3.
DR Genevisible; Q10JI3; OS.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0045892; P:negative regulation of transcription, DNA-templated; IBA:GO_Central.
DR GO; GO:0007165; P:signal transduction; IEA:InterPro.
DR InterPro; IPR032310; NINJA_B.
DR InterPro; IPR031307; Ninja_fam.
DR InterPro; IPR012463; Ninja_motif.
DR InterPro; IPR032308; TDBD.
DR PANTHER; PTHR31413; PTHR31413; 1.
DR Pfam; PF07897; EAR; 1.
DR Pfam; PF16136; NINJA_B; 1.
DR Pfam; PF16135; TDBD; 1.
PE 2: Evidence at transcript level;
KW Nucleus; Reference proteome.
FT CHAIN 1..307
FT /note="Ninja-family protein Os03g0419100"
FT /id="PRO_0000369629"
FT REGION 1..30
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 67..225
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 93..108
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 149..225
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 307 AA; 32439 MW; 96310C9AF2162B22 CRC64;
MASRDFLGVF GGGGGERRAA NGSGSAVGGE SDEIELSLGL SLGGRFGTDM SPDAKRARLA
RSSSIASVCS VSAADGDPSP AAPLPLLRTS SLPTETEEER WRRREMQNRR RLEARRKRLE
RRISVGSSSV PNKPGREDGG DGAVNRLQLR RSIGSQGSSS ANPQDQGPDG SAICQSTEAR
SPSTSDDTNQ NSALPPTAST GKPLNGTVTQ QSPLRTLGSL TMRTSSTGDI GKIMMDMPMV
SSKVEGPNGR KIDGFLYKYR KGEDVSIMCV CHGKFHSPAE FVKHAGGGDV SNPLRHIVVN
PSPSVFL
