NNJA4_ORYSJ
ID NNJA4_ORYSJ Reviewed; 451 AA.
AC Q6AT41; A0A0P0WQF0;
DT 14-APR-2009, integrated into UniProtKB/Swiss-Prot.
DT 13-SEP-2004, sequence version 1.
DT 03-AUG-2022, entry version 88.
DE RecName: Full=Protein NINJA homolog 1 {ECO:0000303|PubMed:23104764};
DE Short=OsNINJA1 {ECO:0000303|PubMed:23104764};
DE AltName: Full=Ninja-family protein NINJA1 {ECO:0000305};
DE AltName: Full=Protein NINJA homolog {ECO:0000303|PubMed:25617318};
DE Short=OsNINJA {ECO:0000303|PubMed:25617318};
DE AltName: Full=Protein NINJA homolog 2 {ECO:0000303|PubMed:23104764};
DE Short=OsNINJA2 {ECO:0000303|PubMed:23104764};
GN Name=NINJA1 {ECO:0000303|PubMed:23104764};
GN Synonyms=NINJA {ECO:0000303|PubMed:25617318},
GN NINJA2 {ECO:0000303|PubMed:23104764};
GN OrderedLocusNames=Os05g0558800, LOC_Os05g48500;
GN ORFNames=OsJ_19515, OSJNBa0001A14.6;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16261349; DOI=10.1007/s00438-005-0039-y;
RA Cheng C.-H., Chung M.C., Liu S.-M., Chen S.-K., Kao F.Y., Lin S.-J.,
RA Hsiao S.-H., Tseng I.C., Hsing Y.-I.C., Wu H.-P., Chen C.-S., Shaw J.-F.,
RA Wu J., Matsumoto T., Sasaki T., Chen H.-C., Chow T.-Y.;
RT "A fine physical map of the rice chromosome 5.";
RL Mol. Genet. Genomics 274:337-345(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [6]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
RN [7]
RP INTERACTION WITH TIFY10C/JAZ8.
RX PubMed=23104764; DOI=10.1093/pcp/pcs145;
RA Yamada S., Kano A., Tamaoki D., Miyamoto A., Shishido H., Miyoshi S.,
RA Taniguchi S., Akimitsu K., Gomi K.;
RT "Involvement of OsJAZ8 in jasmonate-induced resistance to bacterial blight
RT in rice.";
RL Plant Cell Physiol. 53:2060-2072(2012).
RN [8]
RP INTERACTION WITH TIFY11A/JAZ9, AND SUBCELLULAR LOCATION.
RX PubMed=25617318; DOI=10.1016/j.plantsci.2014.12.010;
RA Wu H., Ye H., Yao R., Zhang T., Xiong L.;
RT "OsJAZ9 acts as a transcriptional regulator in jasmonate signaling and
RT modulates salt stress tolerance in rice.";
RL Plant Sci. 232:1-12(2015).
CC -!- SUBUNIT: Interacts with TIFY10C/JAZ8 (PubMed:23104764). Interacts with
CC TIFY11A/JAZ9 (PubMed:25617318). {ECO:0000269|PubMed:23104764,
CC ECO:0000269|PubMed:25617318}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:25617318}.
CC -!- SIMILARITY: Belongs to the Ninja family. {ECO:0000305}.
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DR EMBL; AC144735; AAT85094.1; -; Genomic_DNA.
DR EMBL; AP008211; BAF18210.1; -; Genomic_DNA.
DR EMBL; AP014961; BAS95296.1; -; Genomic_DNA.
DR EMBL; CM000142; EEE64661.1; -; Genomic_DNA.
DR EMBL; AK073985; BAG93746.1; -; mRNA.
DR RefSeq; XP_015639926.1; XM_015784440.1.
DR AlphaFoldDB; Q6AT41; -.
DR STRING; 4530.OS05T0558800-01; -.
DR PaxDb; Q6AT41; -.
DR PRIDE; Q6AT41; -.
DR EnsemblPlants; Os05t0558800-01; Os05t0558800-01; Os05g0558800.
DR EnsemblPlants; Os05t0558800-02; Os05t0558800-02; Os05g0558800.
DR GeneID; 4339584; -.
DR Gramene; Os05t0558800-01; Os05t0558800-01; Os05g0558800.
DR Gramene; Os05t0558800-02; Os05t0558800-02; Os05g0558800.
DR KEGG; osa:4339584; -.
DR eggNOG; ENOG502QSTR; Eukaryota.
DR HOGENOM; CLU_049096_0_0_1; -.
DR InParanoid; Q6AT41; -.
DR OMA; PMLDKDN; -.
DR OrthoDB; 641759at2759; -.
DR PlantReactome; R-OSA-6787011; Jasmonic acid signaling.
DR Proteomes; UP000000763; Chromosome 5.
DR Proteomes; UP000007752; Chromosome 5.
DR Proteomes; UP000059680; Chromosome 5.
DR ExpressionAtlas; Q6AT41; baseline and differential.
DR Genevisible; Q6AT41; OS.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0009867; P:jasmonic acid mediated signaling pathway; IBA:GO_Central.
DR GO; GO:0045892; P:negative regulation of transcription, DNA-templated; IBA:GO_Central.
DR InterPro; IPR031307; Ninja_fam.
DR InterPro; IPR012463; Ninja_motif.
DR PANTHER; PTHR31413; PTHR31413; 1.
DR Pfam; PF07897; EAR; 1.
PE 1: Evidence at protein level;
KW Nucleus; Reference proteome.
FT CHAIN 1..451
FT /note="Protein NINJA homolog 1"
FT /id="PRO_0000369630"
FT REGION 1..223
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 321..346
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 427..451
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 39..64
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 83..100
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 115..129
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 137..152
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 181..197
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 204..223
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 429..451
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 451 AA; 46973 MW; B4FAE8D8083D48D3 CRC64;
MDDENGLELS LGLSLGGTSG KSKARDAPLE PKAEPQVEES SSKGVSQTPE APFVHYYQTN
AENQEHSSKQ RHSPAAPPFG NFWGQPGSSS VPVADGSNEQ KPVSSKRKLL SEEISFQKKP
NTAAEQPDAF SKSSDGGVKN APISISTDDG STGENEDVAE SEAEGSNSWL VAQREDSAKG
SVVNRGSDRK RSSDDAAVGF QGKRQPSFSG SESSSGKLPQ GNPLSLQASN VVAVPYQVPS
QVSAPPSITN ASNFTPVCTV QLRPPTNNGL AVTMGSTSQV AFGYPAVQLP TLETSSSWAF
GAPPQAMSSF TAKDKVERAG ISQADDGKKT QEAGASSSAL VEDDKKSDRA LPLMGSAIRP
GIAPNVKFGG SGSYPDLPWV STTGTGPNGR TISGVTYKFG RNEVKIVCAC HGTHMTPEEF
MRHASADAPG QENSATLPAF PVGNQAASAQ N
