NOC4L_RAT
ID NOC4L_RAT Reviewed; 516 AA.
AC Q5I0I8;
DT 16-AUG-2005, integrated into UniProtKB/Swiss-Prot.
DT 15-FEB-2005, sequence version 1.
DT 03-AUG-2022, entry version 104.
DE RecName: Full=Nucleolar complex protein 4 homolog;
DE Short=NOC4 protein homolog;
DE AltName: Full=NOC4-like protein;
DE AltName: Full=Nucleolar complex-associated protein 4-like protein;
GN Name=Noc4l;
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Rattus.
OX NCBI_TaxID=10116;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Thymus;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
CC -!- SUBCELLULAR LOCATION: Nucleus membrane {ECO:0000250|UniProtKB:Q9BVI4};
CC Multi-pass membrane protein {ECO:0000255}. Nucleus, nucleolus
CC {ECO:0000250|UniProtKB:Q9BVI4}.
CC -!- SIMILARITY: Belongs to the CBF/MAK21 family. {ECO:0000305}.
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DR EMBL; BC088275; AAH88275.1; -; mRNA.
DR RefSeq; NP_001014151.1; NM_001014129.1.
DR AlphaFoldDB; Q5I0I8; -.
DR SMR; Q5I0I8; -.
DR STRING; 10116.ENSRNOP00000053566; -.
DR iPTMnet; Q5I0I8; -.
DR PhosphoSitePlus; Q5I0I8; -.
DR PaxDb; Q5I0I8; -.
DR PRIDE; Q5I0I8; -.
DR GeneID; 360828; -.
DR KEGG; rno:360828; -.
DR UCSC; RGD:1310661; rat.
DR CTD; 79050; -.
DR RGD; 1310661; Noc4l.
DR VEuPathDB; HostDB:ENSRNOG00000037478; -.
DR eggNOG; KOG2154; Eukaryota.
DR HOGENOM; CLU_015945_3_0_1; -.
DR InParanoid; Q5I0I8; -.
DR OMA; DVRYYTF; -.
DR OrthoDB; 891751at2759; -.
DR PhylomeDB; Q5I0I8; -.
DR TreeFam; TF105812; -.
DR Reactome; R-RNO-6791226; Major pathway of rRNA processing in the nucleolus and cytosol.
DR PRO; PR:Q5I0I8; -.
DR Proteomes; UP000002494; Chromosome 12.
DR Bgee; ENSRNOG00000037478; Expressed in pancreas and 19 other tissues.
DR Genevisible; Q5I0I8; RN.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0030692; C:Noc4p-Nop14p complex; IBA:GO_Central.
DR GO; GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0005730; C:nucleolus; IBA:GO_Central.
DR GO; GO:0005654; C:nucleoplasm; IEA:Ensembl.
DR GO; GO:0032040; C:small-subunit processome; IBA:GO_Central.
DR GO; GO:0042254; P:ribosome biogenesis; IEA:InterPro.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR005612; CCAAT-binding_factor.
DR InterPro; IPR027193; Noc4.
DR PANTHER; PTHR12455; PTHR12455; 1.
DR Pfam; PF03914; CBF; 1.
DR SUPFAM; SSF48371; SSF48371; 1.
PE 2: Evidence at transcript level;
KW Membrane; Nucleus; Reference proteome; Transmembrane; Transmembrane helix.
FT CHAIN 1..516
FT /note="Nucleolar complex protein 4 homolog"
FT /id="PRO_0000173486"
FT TRANSMEM 296..316
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 347..367
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 375..395
FT /note="Helical"
FT /evidence="ECO:0000255"
SQ SEQUENCE 516 AA; 58862 MW; 1D11D524C58510EA CRC64;
MERQPASTGS RQELGRLLEA VLSNRGRANA VFDILAVLQS EDPEEIKEGV RTCSRLFGTL
LEREELFVGS LPCEDMALAG SQGATYKYKV WMRHRYHSCC NRLEELLTHP SFQVKELALE
TLMKFVQLEG AKPLEKPQWE SHYLFPRTLF RAVVGGLLTP EDDHSLLISQ FCEYLEYDDI
RYHAMQVATS ILARATSRQP EVSLTFWNNA FTLLSAVNLP LQEHELTNFY VKHAQTSSKW
KVVHLKEQRK AFQEMWLGFL KHKLPLSLYK KVLVAMHDSI LPHLAQPTLM IDFLTSACDV
GGAISLLALN GLFILIHKHN LEYPDFYQRL YGLLDPSIFH VKYRARFFHL ADLFLSSSHL
PAYLVAAFAK RLARLALTAP PEALLMVLPL ICNLLRRHPA CRVMVHRPQG PELDADPYDP
TEKDPARSRA LESCLWELQT LQQHYHPEVS RAASVINQAL SVPEVSIAPL LELTAYEIFE
QDLKKMMPES VPLEFIPAKG LLGRQDDLCT QFFCLS