NOD3B_XENLA
ID NOD3B_XENLA Reviewed; 401 AA.
AC Q91621;
DT 10-JUN-2008, integrated into UniProtKB/Swiss-Prot.
DT 10-JUN-2008, sequence version 2.
DT 03-AUG-2022, entry version 84.
DE RecName: Full=Nodal homolog 3-B;
DE AltName: Full=Fugacin;
DE AltName: Full=Nodal-related protein 3-B;
DE AltName: Full=Xnr3-B;
DE Flags: Precursor;
GN Name=nodal3-b; Synonyms=fug {ECO:0000312|EMBL:AAC59735.1};
OS Xenopus laevis (African clawed frog).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus.
OX NCBI_TaxID=8355;
RN [1] {ECO:0000305, ECO:0000312|EMBL:AAC59735.1}
RP NUCLEOTIDE SEQUENCE [MRNA], AND TISSUE SPECIFICITY.
RC TISSUE=Blastopore lip {ECO:0000269|PubMed:8612984}, and
RC Gastrula {ECO:0000312|EMBL:AAC59735.1};
RX PubMed=8612984; DOI=10.1006/dbio.1995.8052;
RA Ecochard V., Cayrol C., Foulquier F., Zaraisky A., Duprat A.-M.;
RT "A novel TGF-beta-like gene, fugacin, specifically expressed in the Spemann
RT organizer of Xenopus.";
RL Dev. Biol. 172:699-703(1995).
CC -!- FUNCTION: Exhibits mesoderm-dorsalizing activity and neural-inducing
CC activity, but lacks mesoderm-inducing activity. Regulates the
CC expression of specific mesodermal and neural genes. Induces convergent
CC extension movements at the embryonic midline by activating the fgf
CC signaling pathway to induce t/bra expression in the organizer region.
CC Acts with wnt11 to induce Spemann organizer cells and induce axis
CC formation. The unprocessed protein antagonizes bmp-signaling (By
CC similarity). {ECO:0000250|UniProtKB:Q800C0,
CC ECO:0000250|UniProtKB:Q91609}.
CC -!- SUBUNIT: Monomer. The propeptide region interacts with bmp4 in a non-
CC covalent manner (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000250|UniProtKB:Q91620}.
CC -!- TISSUE SPECIFICITY: Expressed in the dorsal marginal region of late
CC blastula, becoming restricted to the dorsal blastopore lip (Spemann
CC organizer) at the early gastrula stage. {ECO:0000269|PubMed:8612984}.
CC -!- DOMAIN: The propeptide region is both necessary and sufficient for bmp-
CC inhibitory activity. The propeptide region and the N- and C-terminal
CC thirds of the mature protein are necessary for neural induction
CC activity. Although cleavage doesn't appear essential for activity,
CC residues surrounding the cleavage site are necessary for activity (By
CC similarity). {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the TGF-beta family. {ECO:0000255}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAC59735.1; Type=Frameshift; Evidence={ECO:0000305};
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DR EMBL; U29588; AAC59735.1; ALT_FRAME; mRNA.
DR RefSeq; NP_001079065.1; NM_001085596.1.
DR AlphaFoldDB; Q91621; -.
DR GeneID; 373597; -.
DR KEGG; xla:373597; -.
DR CTD; 373597; -.
DR Xenbase; XB-GENE-864903; nodal3.2.L.
DR OrthoDB; 1518399at2759; -.
DR Proteomes; UP000186698; Chromosome 3L.
DR Bgee; 373597; Expressed in blastula and 1 other tissue.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR GO; GO:0008083; F:growth factor activity; IEA:UniProtKB-KW.
DR GO; GO:0007369; P:gastrulation; IEA:UniProtKB-KW.
DR Gene3D; 2.10.90.10; -; 1.
DR InterPro; IPR029034; Cystine-knot_cytokine.
DR InterPro; IPR001839; TGF-b_C.
DR InterPro; IPR001111; TGF-b_propeptide.
DR InterPro; IPR015615; TGF-beta-rel.
DR PANTHER; PTHR11848; PTHR11848; 1.
DR Pfam; PF00019; TGF_beta; 1.
DR Pfam; PF00688; TGFb_propeptide; 1.
DR SMART; SM00204; TGFB; 1.
DR SUPFAM; SSF57501; SSF57501; 1.
DR PROSITE; PS51362; TGF_BETA_2; 1.
PE 2: Evidence at transcript level;
KW Cleavage on pair of basic residues; Developmental protein; Disulfide bond;
KW Gastrulation; Glycoprotein; Growth factor; Reference proteome; Secreted;
KW Signal.
FT SIGNAL 1..18
FT /evidence="ECO:0000255"
FT PROPEP 19..274
FT /evidence="ECO:0000255"
FT /id="PRO_0000338452"
FT CHAIN 275..401
FT /note="Nodal homolog 3-B"
FT /evidence="ECO:0000255"
FT /id="PRO_0000338453"
FT CARBOHYD 168
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 337
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 341
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 344
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT DISULFID 299..365
FT /evidence="ECO:0000250|UniProtKB:P43021"
FT DISULFID 328..396
FT /evidence="ECO:0000250|UniProtKB:P43021"
FT CONFLICT 94..95
FT /note="TT -> IY (in Ref. 1; AAC59735)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 401 AA; 46044 MW; 3BDE4D8E5E2D8D02 CRC64;
MALLNLFFCL VFSSPLMAMP PVLQGRKSMS PDSILKDTST DDGARDFQGR KFPQFMMQLY
QNIIRGRDKD LSNLEHPTLQ ESDTVQSFIT KSYTTVGNHW TLFFDMSSIS RSNELKLAEL
RFSLPSFRKS HSVTVDIYHT NDGKEKLFMG SFKTKPSAAL DADCKVFNLT ILLQNFLTRG
KRLIKDEYIQ AKGLHLKDLE KSATEKGTEN VDTLKQDQYH VSDFAAERIM LVVFAKEQSH
AKSDPPSLGK KLFPSKYGID DNANKVNGFR RLRRNKKEKT QIHVSTGPPK PIEEIKPKCK
KVDMFVDFQK IGWGSWIVYP KAYNAYRCES TCAVPLNETE NATNHSYIKS LLPLSDMERK
ECPSCVPVKM MSMSMLYYEN EDFILRHHEE MIVEECGFKD M