NODB_BRAEL
ID NODB_BRAEL Reviewed; 219 AA.
AC P50352;
DT 01-OCT-1996, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-1996, sequence version 1.
DT 03-AUG-2022, entry version 69.
DE RecName: Full=Chitooligosaccharide deacetylase;
DE EC=3.5.1.-;
DE AltName: Full=Nodulation protein B;
GN Name=nodB;
OS Bradyrhizobium elkanii.
OC Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
OC Bradyrhizobiaceae; Bradyrhizobium.
OX NCBI_TaxID=29448;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=USDA 94;
RX PubMed=7949325; DOI=10.1094/mpmi-7-0564;
RA Dobert R.C., Breil B.T., Triplett E.W.;
RT "DNA sequence of the common nodulation genes of Bradyrhizobium elkanii and
RT their phylogenetic relationship to those of other nodulating bacteria.";
RL Mol. Plant Microbe Interact. 7:564-572(1994).
CC -!- FUNCTION: Is involved in generating a small heat-stable compound (Nod),
CC an acylated oligomer of N-acetylglucosamine, that stimulates mitosis in
CC various plant protoplasts.
CC -!- SUBCELLULAR LOCATION: Cytoplasm.
CC -!- SIMILARITY: Belongs to the polysaccharide deacetylase family.
CC {ECO:0000305}.
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DR EMBL; U04609; AAA63601.1; -; Genomic_DNA.
DR RefSeq; WP_016848466.1; NZ_SEMA01000027.1.
DR AlphaFoldDB; P50352; -.
DR SMR; P50352; -.
DR GeneID; 66429406; -.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0016810; F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
DR InterPro; IPR011330; Glyco_hydro/deAcase_b/a-brl.
DR InterPro; IPR002509; NODB_dom.
DR InterPro; IPR026402; Nodulat_NodB.
DR Pfam; PF01522; Polysacc_deac_1; 1.
DR SUPFAM; SSF88713; SSF88713; 1.
DR TIGRFAMs; TIGR04243; nodulat_NodB; 1.
DR PROSITE; PS51677; NODB; 1.
PE 3: Inferred from homology;
KW Cytoplasm; Hydrolase; Metal-binding; Nodulation.
FT CHAIN 1..219
FT /note="Chitooligosaccharide deacetylase"
FT /id="PRO_0000172747"
FT DOMAIN 21..213
FT /note="NodB homology"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01014"
FT ACT_SITE 28
FT /note="Proton acceptor"
FT /evidence="ECO:0000250"
FT ACT_SITE 174
FT /note="Proton donor"
FT /evidence="ECO:0000250"
FT BINDING 79
FT /ligand="a divalent metal cation"
FT /ligand_id="ChEBI:CHEBI:60240"
FT /evidence="ECO:0000250"
FT BINDING 83
FT /ligand="a divalent metal cation"
FT /ligand_id="ChEBI:CHEBI:60240"
FT /evidence="ECO:0000250"
FT SITE 148
FT /note="Raises pKa of active site His"
FT /evidence="ECO:0000250"
SQ SEQUENCE 219 AA; 24003 MW; F36244F94CD58B60 CRC64;
MNELIPLSAV RCNYGDVSGS RSVYLTFDDG PNPFCTPLVL DVLTQHRVPA TFFVIGTYAA
DQPELIRRMI AEGHEVANHT MTHPDLSRCE AAEIHDEVLT ASRAIRLACP QALPRHMRAP
YGIWTEDVLA TSAKAGLAAV HWSVDPRDWS RPGVDSIVKS VLAAVRPGAI VLLHDGYPPG
EEASCIDSTS REQTVRALAY LIPALQLRGF EIHPLPQLH