NODW_BRADU
ID NODW_BRADU Reviewed; 227 AA.
AC P15940;
DT 01-APR-1990, integrated into UniProtKB/Swiss-Prot.
DT 01-APR-1990, sequence version 1.
DT 25-MAY-2022, entry version 142.
DE RecName: Full=Nodulation protein W;
GN Name=nodW; OrderedLocusNames=bll1714;
OS Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 /
OS NBRC 14792 / USDA 110).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
OC Bradyrhizobiaceae; Bradyrhizobium.
OX NCBI_TaxID=224911;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=USDA 110spc4;
RX PubMed=2320582; DOI=10.1073/pnas.87.7.2680;
RA Goettfert M., Grob P., Hennecke H.;
RT "Proposed regulatory pathway encoded by the nodV and nodW genes,
RT determinants of host specificity in Bradyrhizobium japonicum.";
RL Proc. Natl. Acad. Sci. U.S.A. 87:2680-2684(1990).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=USDA 110spc4;
RX PubMed=11157954; DOI=10.1128/jb.183.4.1405-1412.2001;
RA Goettfert M., Roethlisberger S., Kuendig C., Beck C., Marty R.,
RA Hennecke H.;
RT "Potential symbiosis-specific genes uncovered by sequencing a 410-kb DNA
RT region of the Bradyrhizobium japonicum chromosome.";
RL J. Bacteriol. 183:1405-1412(2001).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110;
RX PubMed=12597275; DOI=10.1093/dnares/9.6.189;
RA Kaneko T., Nakamura Y., Sato S., Minamisawa K., Uchiumi T., Sasamoto S.,
RA Watanabe A., Idesawa K., Iriguchi M., Kawashima K., Kohara M.,
RA Matsumoto M., Shimpo S., Tsuruoka H., Wada T., Yamada M., Tabata S.;
RT "Complete genomic sequence of nitrogen-fixing symbiotic bacterium
RT Bradyrhizobium japonicum USDA110.";
RL DNA Res. 9:189-197(2002).
CC -!- FUNCTION: Member of the two-component regulatory system NodV/NodW
CC probably involved in the regulation of the transcription of genes
CC involved in the nodulation process.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000305}.
CC -!- PTM: Phosphorylated by NodV. {ECO:0000305}.
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DR EMBL; M31765; AAA26232.1; -; Genomic_DNA.
DR EMBL; AF322012; AAG60697.1; -; Genomic_DNA.
DR EMBL; BA000040; BAC46979.1; -; Genomic_DNA.
DR PIR; B35989; B35989.
DR RefSeq; NP_768354.1; NC_004463.1.
DR RefSeq; WP_011084526.1; NZ_CP011360.1.
DR AlphaFoldDB; P15940; -.
DR SMR; P15940; -.
DR STRING; 224911.27349967; -.
DR EnsemblBacteria; BAC46979; BAC46979; BAC46979.
DR GeneID; 64067027; -.
DR KEGG; bja:bll1714; -.
DR PATRIC; fig|224911.44.peg.1177; -.
DR eggNOG; COG4566; Bacteria.
DR HOGENOM; CLU_000445_90_4_5; -.
DR InParanoid; P15940; -.
DR OMA; EIPITHS; -.
DR PhylomeDB; P15940; -.
DR Proteomes; UP000002526; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0000160; P:phosphorelay signal transduction system; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:InterPro.
DR CDD; cd06170; LuxR_C_like; 1.
DR Gene3D; 1.10.10.10; -; 1.
DR InterPro; IPR011006; CheY-like_superfamily.
DR InterPro; IPR001789; Sig_transdc_resp-reg_receiver.
DR InterPro; IPR000792; Tscrpt_reg_LuxR_C.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR Pfam; PF00196; GerE; 1.
DR Pfam; PF00072; Response_reg; 1.
DR PRINTS; PR00038; HTHLUXR.
DR SMART; SM00421; HTH_LUXR; 1.
DR SMART; SM00448; REC; 1.
DR SUPFAM; SSF52172; SSF52172; 1.
DR PROSITE; PS00622; HTH_LUXR_1; 1.
DR PROSITE; PS50043; HTH_LUXR_2; 1.
DR PROSITE; PS50110; RESPONSE_REGULATORY; 1.
PE 3: Inferred from homology;
KW Cytoplasm; DNA-binding; Nodulation; Phosphoprotein; Reference proteome;
KW Transcription; Transcription regulation; Two-component regulatory system.
FT CHAIN 1..227
FT /note="Nodulation protein W"
FT /id="PRO_0000081152"
FT DOMAIN 21..135
FT /note="Response regulatory"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00169"
FT DOMAIN 151..216
FT /note="HTH luxR-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00411"
FT DNA_BIND 175..194
FT /note="H-T-H motif"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00411"
FT MOD_RES 70
FT /note="4-aspartylphosphate"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00169"
SQ SEQUENCE 227 AA; 25169 MW; 8ECF1A23DE46D8D1 CRC64;
MTGRFDWRGQ GGHTEASTKA IVFVVEDDIS MRRSLTNLFR SVGLEVVAFG SAREMLQSTM
PDVTSCLVLD VRLPGLSGLD YQTELARLNI HIPIIFITGH GDIPMTVRAM KGGAVDFLSK
PFRDQELLDA VVAATERDRK RREAQRTVAN LKSLFETLSP REQAVMKLVA TGLMNKQVAA
ELGLAEITVK IYRGHVMKKM RARSLADLIR MSETLGISAN HTEQTQV