ID   NOP10_ARATH             Reviewed;          64 AA.
AC   Q93XX8; Q9SIM0;
DT   11-OCT-2004, integrated into UniProtKB/Swiss-Prot.
DT   05-JUL-2005, sequence version 2.
DT   03-AUG-2022, entry version 109.
DE   RecName: Full=H/ACA ribonucleoprotein complex subunit 3-like protein;
DE   AltName: Full=Nucleolar protein 10;
GN   OrderedLocusNames=At2g20490; ORFNames=T13C7.8;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=10617197; DOI=10.1038/45471;
RA   Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA   Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA   Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA   Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA   Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA   Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA   Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT   "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL   Nature 402:761-768(1999).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=14593172; DOI=10.1126/science.1088305;
RA   Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA   Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA   Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA   Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA   Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA   Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA   Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA   Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA   Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA   Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA   Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA   Ecker J.R.;
RT   "Empirical analysis of transcriptional activity in the Arabidopsis
RT   genome.";
RL   Science 302:842-846(2003).
RN   [4]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA   Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA   Feldmann K.A.;
RT   "Full-length cDNA from Arabidopsis thaliana.";
RL   Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Required for ribosome biogenesis. Part of a complex which
CC       catalyzes pseudouridylation of rRNA. This involves the isomerization of
CC       uridine such that the ribose is subsequently attached to C5, instead of
CC       the normal N1. Pseudouridine ('psi') residues may serve to stabilize
CC       the conformation of rRNAs (By similarity). {ECO:0000250}.
CC   -!- SUBUNIT: Component of the small nucleolar ribonucleoprotein particles
CC       containing H/ACA-type snoRNAs (H/ACA snoRNPs). {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: Nucleus, nucleolus {ECO:0000250}.
CC   -!- ALTERNATIVE PRODUCTS:
CC       Event=Alternative splicing; Named isoforms=1;
CC         Comment=A number of isoforms are produced. According to EST
CC         sequences.;
CC       Name=1;
CC         IsoId=Q93XX8-1; Sequence=Displayed;
CC   -!- SIMILARITY: Belongs to the NOP10 family. {ECO:0000305}.
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DR   EMBL; AC007109; AAD25649.1; -; Genomic_DNA.
DR   EMBL; CP002685; AEC07015.1; -; Genomic_DNA.
DR   EMBL; CP002685; ANM63113.1; -; Genomic_DNA.
DR   EMBL; AY054656; AAK96847.1; -; mRNA.
DR   EMBL; BT001178; AAN65065.1; -; mRNA.
DR   EMBL; AY087879; AAM65431.1; -; mRNA.
DR   PIR; H84589; H84589.
DR   RefSeq; NP_001325224.1; NM_001335686.1. [Q93XX8-1]
DR   RefSeq; NP_565472.1; NM_127608.4. [Q93XX8-1]
DR   AlphaFoldDB; Q93XX8; -.
DR   SMR; Q93XX8; -.
DR   IntAct; Q93XX8; 1.
DR   STRING; 3702.AT2G20490.1; -.
DR   PaxDb; Q93XX8; -.
DR   PRIDE; Q93XX8; -.
DR   ProteomicsDB; 250595; -. [Q93XX8-1]
DR   EnsemblPlants; AT2G20490.1; AT2G20490.1; AT2G20490. [Q93XX8-1]
DR   EnsemblPlants; AT2G20490.3; AT2G20490.3; AT2G20490. [Q93XX8-1]
DR   GeneID; 816569; -.
DR   Gramene; AT2G20490.1; AT2G20490.1; AT2G20490. [Q93XX8-1]
DR   Gramene; AT2G20490.3; AT2G20490.3; AT2G20490. [Q93XX8-1]
DR   KEGG; ath:AT2G20490; -.
DR   Araport; AT2G20490; -.
DR   TAIR; locus:2054804; AT2G20490.
DR   eggNOG; KOG3503; Eukaryota.
DR   HOGENOM; CLU_184680_1_0_1; -.
DR   InParanoid; Q93XX8; -.
DR   OMA; ITRSAHP; -.
DR   PhylomeDB; Q93XX8; -.
DR   PRO; PR:Q93XX8; -.
DR   Proteomes; UP000006548; Chromosome 2.
DR   ExpressionAtlas; Q93XX8; baseline and differential.
DR   Genevisible; Q93XX8; AT.
DR   GO; GO:0031429; C:box H/ACA snoRNP complex; IBA:GO_Central.
DR   GO; GO:0090661; C:box H/ACA telomerase RNP complex; IBA:GO_Central.
DR   GO; GO:0015030; C:Cajal body; IDA:TAIR.
DR   GO; GO:0005739; C:mitochondrion; HDA:TAIR.
DR   GO; GO:0005730; C:nucleolus; IDA:TAIR.
DR   GO; GO:0034513; F:box H/ACA snoRNA binding; IBA:GO_Central.
DR   GO; GO:0070034; F:telomerase RNA binding; IBA:GO_Central.
DR   GO; GO:0010197; P:polar nucleus fusion; IMP:TAIR.
DR   GO; GO:0031118; P:rRNA pseudouridine synthesis; IBA:GO_Central.
DR   GO; GO:0031120; P:snRNA pseudouridine synthesis; IBA:GO_Central.
DR   InterPro; IPR007264; H/ACA_rnp_Nop10.
DR   InterPro; IPR036756; H/ACA_rnp_Nop10_sf.
DR   PANTHER; PTHR13305; PTHR13305; 1.
DR   Pfam; PF04135; Nop10p; 1.
DR   SUPFAM; SSF144210; SSF144210; 1.
PE   3: Inferred from homology;
KW   Alternative splicing; Nucleus; Reference proteome; Ribonucleoprotein;
KW   Ribosome biogenesis; rRNA processing.
FT   CHAIN           1..64
FT                   /note="H/ACA ribonucleoprotein complex subunit 3-like
FT                   protein"
FT                   /id="PRO_0000149007"
FT   CONFLICT        36
FT                   /note="S -> P (in Ref. 3; AAK96847/AAN65065)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   64 AA;  7392 MW;  2308BBE204815764 CRC64;
     MYLQCYINEK GEKVYTTKKE SPLGLATESA HPARFSPDDK YSKQRVLLKK RFGLLPTQNA
     PLQY