NOP12_YARLI
ID NOP12_YARLI Reviewed; 509 AA.
AC Q6C2Q7;
DT 06-DEC-2005, integrated into UniProtKB/Swiss-Prot.
DT 16-AUG-2004, sequence version 1.
DT 25-MAY-2022, entry version 93.
DE RecName: Full=Nucleolar protein 12;
GN Name=NOP12; OrderedLocusNames=YALI0F05918g;
OS Yarrowia lipolytica (strain CLIB 122 / E 150) (Yeast) (Candida lipolytica).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC Saccharomycetales; Dipodascaceae; Yarrowia.
OX NCBI_TaxID=284591;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CLIB 122 / E 150;
RX PubMed=15229592; DOI=10.1038/nature02579;
RA Dujon B., Sherman D., Fischer G., Durrens P., Casaregola S., Lafontaine I.,
RA de Montigny J., Marck C., Neuveglise C., Talla E., Goffard N., Frangeul L.,
RA Aigle M., Anthouard V., Babour A., Barbe V., Barnay S., Blanchin S.,
RA Beckerich J.-M., Beyne E., Bleykasten C., Boisrame A., Boyer J.,
RA Cattolico L., Confanioleri F., de Daruvar A., Despons L., Fabre E.,
RA Fairhead C., Ferry-Dumazet H., Groppi A., Hantraye F., Hennequin C.,
RA Jauniaux N., Joyet P., Kachouri R., Kerrest A., Koszul R., Lemaire M.,
RA Lesur I., Ma L., Muller H., Nicaud J.-M., Nikolski M., Oztas S.,
RA Ozier-Kalogeropoulos O., Pellenz S., Potier S., Richard G.-F.,
RA Straub M.-L., Suleau A., Swennen D., Tekaia F., Wesolowski-Louvel M.,
RA Westhof E., Wirth B., Zeniou-Meyer M., Zivanovic Y., Bolotin-Fukuhara M.,
RA Thierry A., Bouchier C., Caudron B., Scarpelli C., Gaillardin C.,
RA Weissenbach J., Wincker P., Souciet J.-L.;
RT "Genome evolution in yeasts.";
RL Nature 430:35-44(2004).
CC -!- FUNCTION: Involved in pre-25S rRNA processing. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the RRM RBM34 family. {ECO:0000305}.
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DR EMBL; CR382132; CAG77862.1; -; Genomic_DNA.
DR RefSeq; XP_505055.1; XM_505055.1.
DR AlphaFoldDB; Q6C2Q7; -.
DR SMR; Q6C2Q7; -.
DR STRING; 4952.CAG77862; -.
DR EnsemblFungi; CAG77862; CAG77862; YALI0_F05918g.
DR GeneID; 2908470; -.
DR KEGG; yli:YALI0F05918g; -.
DR VEuPathDB; FungiDB:YALI0_F05918g; -.
DR HOGENOM; CLU_006468_0_0_1; -.
DR InParanoid; Q6C2Q7; -.
DR OMA; QFHDENA; -.
DR Proteomes; UP000001300; Chromosome F.
DR GO; GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
DR CDD; cd12669; RRM1_Nop12p_like; 1.
DR Gene3D; 3.30.70.330; -; 2.
DR InterPro; IPR034777; Nop12_RRM1.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR Pfam; PF00076; RRM_1; 1.
DR SMART; SM00360; RRM; 2.
DR SUPFAM; SSF54928; SSF54928; 2.
DR PROSITE; PS50102; RRM; 2.
PE 3: Inferred from homology;
KW Coiled coil; Nucleus; Reference proteome; Repeat; Ribosome biogenesis;
KW RNA-binding; rRNA processing.
FT CHAIN 1..509
FT /note="Nucleolar protein 12"
FT /id="PRO_0000081674"
FT DOMAIN 168..266
FT /note="RRM 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00176"
FT DOMAIN 274..359
FT /note="RRM 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00176"
FT REGION 1..152
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 345..403
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 419..509
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 33..114
FT /evidence="ECO:0000255"
FT COMPBIAS 1..23
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 40..84
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 85..133
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 357..393
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 475..502
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 509 AA; 57053 MW; BBF37FDB0FB732E9 CRC64;
MTTTKDNSGL AALFANSSGP RQKPQRAGKV DPVRDQQEDK MEVEDEEEDE EEDEEDEEED
EEDEEDEEEK EEDDDDDDDE EEIEEPVIKK SKKNKKSKEE SADLEDQYMA KLAEEVAEEK
PMVAETSAEE IKVDEPESDS EDEPELDVDE ETKKKLEATN KELDKADYTI FVGNVSSEVI
TDKTVYNNFK ALFAAIGTVA SVRFRSISFS KLLPRKVAFI SQQFHSKRDT VNAYIVFKNV
KSVKGALTLN GSVFKGFHMR VDSVAHPGAQ DHKRCVFVGA LDFEEQEESL WEAFSSCGDV
EYVRIVRDPK TNVGKGFAYV QFKDVNSVEQ ALLLNGKGIN ELSKSTTNKR KLRVSRAKSQ
HSQERAKQAD MKNIRNAKTE GLSRDEKSHF GRAQSRLGKA GKAQLQSIVQ EGLRAKKEDG
KVNLARSKRR GVKPNKNRVE KPGQSRAEKR KAMFGTPTNG APGAGGKKKR LTTRSQKFKQ
DGGVKKDGDA KKDGPKKERD GSKKGSKKN