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NOP9_SCHJY
ID   NOP9_SCHJY              Reviewed;         641 AA.
AC   B6K1Y8;
DT   03-MAY-2011, integrated into UniProtKB/Swiss-Prot.
DT   16-DEC-2008, sequence version 1.
DT   25-MAY-2022, entry version 52.
DE   RecName: Full=Nucleolar protein 9;
DE   AltName: Full=Pumilio domain-containing protein nop9;
GN   Name=nop9; ORFNames=SJAG_02250;
OS   Schizosaccharomyces japonicus (strain yFS275 / FY16936) (Fission yeast).
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina;
OC   Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae;
OC   Schizosaccharomyces.
OX   NCBI_TaxID=402676;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=yFS275 / FY16936;
RX   PubMed=21511999; DOI=10.1126/science.1203357;
RA   Rhind N., Chen Z., Yassour M., Thompson D.A., Haas B.J., Habib N.,
RA   Wapinski I., Roy S., Lin M.F., Heiman D.I., Young S.K., Furuya K., Guo Y.,
RA   Pidoux A., Chen H.M., Robbertse B., Goldberg J.M., Aoki K., Bayne E.H.,
RA   Berlin A.M., Desjardins C.A., Dobbs E., Dukaj L., Fan L., FitzGerald M.G.,
RA   French C., Gujja S., Hansen K., Keifenheim D., Levin J.Z., Mosher R.A.,
RA   Mueller C.A., Pfiffner J., Priest M., Russ C., Smialowska A., Swoboda P.,
RA   Sykes S.M., Vaughn M., Vengrova S., Yoder R., Zeng Q., Allshire R.,
RA   Baulcombe D., Birren B.W., Brown W., Ekwall K., Kellis M., Leatherwood J.,
RA   Levin H., Margalit H., Martienssen R., Nieduszynski C.A., Spatafora J.W.,
RA   Friedman N., Dalgaard J.Z., Baumann P., Niki H., Regev A., Nusbaum C.;
RT   "Comparative functional genomics of the fission yeasts.";
RL   Science 332:930-936(2011).
CC   -!- FUNCTION: RNA-binding nucleolar protein required for pre-rRNA
CC       processing. Involved in production of 18S rRNA and assembly of small
CC       ribosomal subunit (By similarity). {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: Nucleus, nucleolus {ECO:0000250}.
CC   -!- SIMILARITY: Belongs to the NOP9 family. {ECO:0000305}.
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DR   EMBL; KE651166; EEB07169.1; -; Genomic_DNA.
DR   RefSeq; XP_002173462.1; XM_002173426.1.
DR   AlphaFoldDB; B6K1Y8; -.
DR   SMR; B6K1Y8; -.
DR   STRING; 4897.EEB07169; -.
DR   EnsemblFungi; EEB07169; EEB07169; SJAG_02250.
DR   GeneID; 7050225; -.
DR   VEuPathDB; FungiDB:SJAG_02250; -.
DR   eggNOG; KOG2188; Eukaryota.
DR   HOGENOM; CLU_008720_1_1_1; -.
DR   OMA; TPNGSHI; -.
DR   OrthoDB; 238378at2759; -.
DR   Proteomes; UP000001744; Unassembled WGS sequence.
DR   GO; GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR   GO; GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
DR   Gene3D; 1.25.10.10; -; 2.
DR   InterPro; IPR011989; ARM-like.
DR   InterPro; IPR016024; ARM-type_fold.
DR   InterPro; IPR040000; NOP9.
DR   InterPro; IPR033133; PUM-HD.
DR   InterPro; IPR001313; Pumilio_RNA-bd_rpt.
DR   PANTHER; PTHR13102; PTHR13102; 1.
DR   Pfam; PF00806; PUF; 2.
DR   SMART; SM00025; Pumilio; 8.
DR   SUPFAM; SSF48371; SSF48371; 2.
DR   PROSITE; PS50302; PUM; 7.
DR   PROSITE; PS50303; PUM_HD; 1.
PE   3: Inferred from homology;
KW   Nucleus; Reference proteome; Repeat; Ribosome biogenesis; rRNA processing.
FT   CHAIN           1..641
FT                   /note="Nucleolar protein 9"
FT                   /id="PRO_0000407833"
FT   REPEAT          89..124
FT                   /note="Pumilio 1"
FT   REPEAT          125..160
FT                   /note="Pumilio 2"
FT   REPEAT          185..227
FT                   /note="Pumilio 3"
FT   REPEAT          248..284
FT                   /note="Pumilio 4"
FT   REPEAT          302..337
FT                   /note="Pumilio 5"
FT   REPEAT          338..373
FT                   /note="Pumilio 6"
FT   REPEAT          477..515
FT                   /note="Pumilio 7"
FT   REPEAT          516..553
FT                   /note="Pumilio 8"
FT   REGION          1..39
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   641 AA;  73801 MW;  18BABA9BF4049D71 CRC64;
     MARKRRQRGK RHSSKKTEDV DVSEDEFEQT EEPKLGQINK YTKEPIQPFL GVLTPEEEKY
     FREIEETLVS HNTRDNEDTR YLVDSIFAEV SGKELQVLNN VFGSKVLEKV FTLASSQQIK
     NFFGALNGSY LQITQTTFGS FVLEKLLSHM GRIIDMEEKG GALDEEEGSE FVATAESLIM
     YMCNELRPEI SALLDHKLAA HVLEKLLLLL NGQRSVQEGE SKAKYVSISV PSSFKEYAYS
     IVESAAENLE ATELRAYSVN KYASRVIQAF VRIEFERRAR SKKNKATPFS DKLLLSKEYD
     WKELPFVETL LKDETGSRVL EVLVERMPAS DLTRLENVFE GRYYRLCVHP IANFVMQKFI
     KRANALTVER MLNELKDSSE SLVRKSFLSV LKTLLETCNE KNFHQNHLFR LIISAAKERH
     PKQNLFVALL RSKHKKDKNS TDGKRVLVNN FIAVQLVEEM LRVPIELSSE LIESLLELEP
     ESIVEYATET ASSHIIEQIL GMSDLKMAHR RRLLNAFDGH FAEIAVTAPG SHIVDKCWFA
     TQDLPLYRSR IVAELAEAGD EVKFDFYGKK VWANWKVELY RRAADQWYRW SKEDKSEKPI
     MKRVRSLPPL ENTFARKRTM EPSEDLGASK KTRMTAFFGT I
 
 
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