NOP9_SCHJY
ID NOP9_SCHJY Reviewed; 641 AA.
AC B6K1Y8;
DT 03-MAY-2011, integrated into UniProtKB/Swiss-Prot.
DT 16-DEC-2008, sequence version 1.
DT 25-MAY-2022, entry version 52.
DE RecName: Full=Nucleolar protein 9;
DE AltName: Full=Pumilio domain-containing protein nop9;
GN Name=nop9; ORFNames=SJAG_02250;
OS Schizosaccharomyces japonicus (strain yFS275 / FY16936) (Fission yeast).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina;
OC Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae;
OC Schizosaccharomyces.
OX NCBI_TaxID=402676;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=yFS275 / FY16936;
RX PubMed=21511999; DOI=10.1126/science.1203357;
RA Rhind N., Chen Z., Yassour M., Thompson D.A., Haas B.J., Habib N.,
RA Wapinski I., Roy S., Lin M.F., Heiman D.I., Young S.K., Furuya K., Guo Y.,
RA Pidoux A., Chen H.M., Robbertse B., Goldberg J.M., Aoki K., Bayne E.H.,
RA Berlin A.M., Desjardins C.A., Dobbs E., Dukaj L., Fan L., FitzGerald M.G.,
RA French C., Gujja S., Hansen K., Keifenheim D., Levin J.Z., Mosher R.A.,
RA Mueller C.A., Pfiffner J., Priest M., Russ C., Smialowska A., Swoboda P.,
RA Sykes S.M., Vaughn M., Vengrova S., Yoder R., Zeng Q., Allshire R.,
RA Baulcombe D., Birren B.W., Brown W., Ekwall K., Kellis M., Leatherwood J.,
RA Levin H., Margalit H., Martienssen R., Nieduszynski C.A., Spatafora J.W.,
RA Friedman N., Dalgaard J.Z., Baumann P., Niki H., Regev A., Nusbaum C.;
RT "Comparative functional genomics of the fission yeasts.";
RL Science 332:930-936(2011).
CC -!- FUNCTION: RNA-binding nucleolar protein required for pre-rRNA
CC processing. Involved in production of 18S rRNA and assembly of small
CC ribosomal subunit (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the NOP9 family. {ECO:0000305}.
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DR EMBL; KE651166; EEB07169.1; -; Genomic_DNA.
DR RefSeq; XP_002173462.1; XM_002173426.1.
DR AlphaFoldDB; B6K1Y8; -.
DR SMR; B6K1Y8; -.
DR STRING; 4897.EEB07169; -.
DR EnsemblFungi; EEB07169; EEB07169; SJAG_02250.
DR GeneID; 7050225; -.
DR VEuPathDB; FungiDB:SJAG_02250; -.
DR eggNOG; KOG2188; Eukaryota.
DR HOGENOM; CLU_008720_1_1_1; -.
DR OMA; TPNGSHI; -.
DR OrthoDB; 238378at2759; -.
DR Proteomes; UP000001744; Unassembled WGS sequence.
DR GO; GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
DR Gene3D; 1.25.10.10; -; 2.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR040000; NOP9.
DR InterPro; IPR033133; PUM-HD.
DR InterPro; IPR001313; Pumilio_RNA-bd_rpt.
DR PANTHER; PTHR13102; PTHR13102; 1.
DR Pfam; PF00806; PUF; 2.
DR SMART; SM00025; Pumilio; 8.
DR SUPFAM; SSF48371; SSF48371; 2.
DR PROSITE; PS50302; PUM; 7.
DR PROSITE; PS50303; PUM_HD; 1.
PE 3: Inferred from homology;
KW Nucleus; Reference proteome; Repeat; Ribosome biogenesis; rRNA processing.
FT CHAIN 1..641
FT /note="Nucleolar protein 9"
FT /id="PRO_0000407833"
FT REPEAT 89..124
FT /note="Pumilio 1"
FT REPEAT 125..160
FT /note="Pumilio 2"
FT REPEAT 185..227
FT /note="Pumilio 3"
FT REPEAT 248..284
FT /note="Pumilio 4"
FT REPEAT 302..337
FT /note="Pumilio 5"
FT REPEAT 338..373
FT /note="Pumilio 6"
FT REPEAT 477..515
FT /note="Pumilio 7"
FT REPEAT 516..553
FT /note="Pumilio 8"
FT REGION 1..39
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 641 AA; 73801 MW; 18BABA9BF4049D71 CRC64;
MARKRRQRGK RHSSKKTEDV DVSEDEFEQT EEPKLGQINK YTKEPIQPFL GVLTPEEEKY
FREIEETLVS HNTRDNEDTR YLVDSIFAEV SGKELQVLNN VFGSKVLEKV FTLASSQQIK
NFFGALNGSY LQITQTTFGS FVLEKLLSHM GRIIDMEEKG GALDEEEGSE FVATAESLIM
YMCNELRPEI SALLDHKLAA HVLEKLLLLL NGQRSVQEGE SKAKYVSISV PSSFKEYAYS
IVESAAENLE ATELRAYSVN KYASRVIQAF VRIEFERRAR SKKNKATPFS DKLLLSKEYD
WKELPFVETL LKDETGSRVL EVLVERMPAS DLTRLENVFE GRYYRLCVHP IANFVMQKFI
KRANALTVER MLNELKDSSE SLVRKSFLSV LKTLLETCNE KNFHQNHLFR LIISAAKERH
PKQNLFVALL RSKHKKDKNS TDGKRVLVNN FIAVQLVEEM LRVPIELSSE LIESLLELEP
ESIVEYATET ASSHIIEQIL GMSDLKMAHR RRLLNAFDGH FAEIAVTAPG SHIVDKCWFA
TQDLPLYRSR IVAELAEAGD EVKFDFYGKK VWANWKVELY RRAADQWYRW SKEDKSEKPI
MKRVRSLPPL ENTFARKRTM EPSEDLGASK KTRMTAFFGT I