NOSD_PSEST
ID NOSD_PSEST Reviewed; 436 AA.
AC P19843;
DT 01-FEB-1991, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-1992, sequence version 2.
DT 03-AUG-2022, entry version 79.
DE RecName: Full=Probable ABC transporter binding protein NosD {ECO:0000305};
DE Flags: Precursor;
GN Name=nosD {ECO:0000303|PubMed:2170125};
OS Pseudomonas stutzeri (Pseudomonas perfectomarina).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=316;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], FUNCTION, AND SUBCELLULAR LOCATION.
RC STRAIN=ATCC 14405 / JCM 20778 / CIP 107696 / IAM 12931 / LMG 2243 / NCIMB
RC 568 / 218 / ZoBell 632;
RX PubMed=2170125; DOI=10.1111/j.1432-1033.1990.tb19265.x;
RA Zumft W.G., Viebrock-Sambale A., Braun C.;
RT "Nitrous oxide reductase from denitrifying Pseudomonas stutzeri. Genes for
RT copper-processing and properties of the deduced products, including a new
RT member of the family of ATP/GTP-binding proteins.";
RL Eur. J. Biochem. 192:591-599(1990).
RN [2]
RP FUNCTION, SUBUNIT, AND INDUCTION.
RC STRAIN=ATCC 14405 / JCM 20778 / CIP 107696 / IAM 12931 / LMG 2243 / NCIMB
RC 568 / 218 / ZoBell 632;
RX PubMed=12618453; DOI=10.1128/jb.185.6.1895-1902.2003;
RA Honisch U., Zumft W.G.;
RT "Operon structure and regulation of the nos gene region of Pseudomonas
RT stutzeri, encoding an ABC-Type ATPase for maturation of nitrous oxide
RT reductase.";
RL J. Bacteriol. 185:1895-1902(2003).
CC -!- FUNCTION: Required for the assembly of the copper chromophores of
CC nitrous oxide reductase (PubMed:2170125). Could be part of the ABC
CC transporter complex NosDFY (Probable). {ECO:0000269|PubMed:2170125,
CC ECO:0000305|PubMed:12618453}.
CC -!- SUBUNIT: The complex may be composed of an ATP-binding protein (NosF),
CC a transmembrane protein (NosY) and a solute-binding protein (NosD).
CC {ECO:0000305|PubMed:12618453}.
CC -!- SUBCELLULAR LOCATION: Periplasm {ECO:0000269|PubMed:2170125}.
CC -!- INDUCTION: Induced in response to denitrifying conditions. Activation
CC requires NosR and DnrD regulators. {ECO:0000269|PubMed:12618453}.
CC -!- SIMILARITY: Belongs to the NosD family. {ECO:0000305}.
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DR EMBL; X53676; CAA37715.1; -; Genomic_DNA.
DR PIR; S13583; S13583.
DR RefSeq; WP_036990777.1; NZ_POUM01000011.1.
DR PDB; 7O0Y; EM; 3.30 A; A=1-436.
DR PDB; 7O10; EM; 3.60 A; A=1-436.
DR PDB; 7O11; EM; 3.70 A; A=1-436.
DR PDB; 7O12; EM; 3.70 A; A=1-436.
DR PDB; 7O14; EM; -; A=1-436.
DR PDB; 7O15; EM; -; A=1-436.
DR PDB; 7O16; EM; -; A=1-436.
DR PDB; 7O17; EM; 4.50 A; A=1-436.
DR PDBsum; 7O0Y; -.
DR PDBsum; 7O10; -.
DR PDBsum; 7O11; -.
DR PDBsum; 7O12; -.
DR PDBsum; 7O14; -.
DR PDBsum; 7O15; -.
DR PDBsum; 7O16; -.
DR PDBsum; 7O17; -.
DR AlphaFoldDB; P19843; -.
DR SMR; P19843; -.
DR STRING; 32042.PstZobell_01042; -.
DR GO; GO:0042597; C:periplasmic space; IEA:UniProtKB-SubCell.
DR Gene3D; 2.160.20.10; -; 2.
DR InterPro; IPR006633; Carb-bd_sugar_hydrolysis-dom.
DR InterPro; IPR026464; NosD_copper_fam.
DR InterPro; IPR007742; NosD_dom.
DR InterPro; IPR022441; Para_beta_helix_rpt-2.
DR InterPro; IPR006626; PbH1.
DR InterPro; IPR012334; Pectin_lyas_fold.
DR InterPro; IPR011050; Pectin_lyase_fold/virulence.
DR Pfam; PF05048; NosD; 1.
DR SMART; SM00722; CASH; 2.
DR SMART; SM00710; PbH1; 8.
DR SUPFAM; SSF51126; SSF51126; 1.
DR TIGRFAMs; TIGR04247; NosD_copper_fam; 1.
DR TIGRFAMs; TIGR03804; para_beta_helix; 2.
PE 1: Evidence at protein level;
KW 3D-structure; Periplasm; Repeat; Signal.
FT SIGNAL 1..27
FT /evidence="ECO:0000255"
FT CHAIN 28..436
FT /note="Probable ABC transporter binding protein NosD"
FT /id="PRO_0000031835"
FT REPEAT 85..113
FT /note="PbH1 1"
FT /evidence="ECO:0000255"
FT REPEAT 115..136
FT /note="PbH1 2"
FT /evidence="ECO:0000255"
FT REPEAT 137..166
FT /note="PbH1 3"
FT /evidence="ECO:0000255"
FT REPEAT 167..188
FT /note="PbH1 4"
FT /evidence="ECO:0000255"
FT REPEAT 189..210
FT /note="PbH1 5"
FT /evidence="ECO:0000255"
FT REPEAT 233..255
FT /note="PbH1 6"
FT /evidence="ECO:0000255"
FT REPEAT 293..314
FT /note="PbH1 7"
FT /evidence="ECO:0000255"
FT REPEAT 316..354
FT /note="PbH1 8"
FT /evidence="ECO:0000255"
SQ SEQUENCE 436 AA; 48214 MW; 0EC39DF1B54F52E5 CRC64;
MFKAQATFSR YSAAVSLLLL FSGAAQAAPQ SITTLPLQPD GENRWRLPAG EYQGQFTIEQ
PMQLRCEPGA VIQSQGQGSS LLISAPDVLV EGCTLYEWGS DLTAMDSAVF ILPAAERAQI
SNNRMRGPGF GVFVDGTRDV QVIGNEIDGD AGVRSQDRGN GIHLFAVSGA RVLHNHVRNA
RDGIYIDTSN GNHLEGNVIE DVRYGVHYMF ANENSLIDNV TRRTRTGYAL MQSRKLTVTG
NRSEQDQNYG ILMNYITYST ITGNFVSDVQ RGDTGGDSMI SGGEGKALFI YNSLFNTIEN
NHFEKSSLGI HLTAGSEDNR ISGNAFVGNQ QQVKYVASRT QEWSVDGRGN YWSDYLGWDR
NNDGLGDIAY EPNDNVDRLL WLYPQVRLLM NSPSIEVLRW VQRAFPVIKS PGVQDSHPLM
KLPTEKLLTE KQEPTS
