NPC6_ARATH
ID NPC6_ARATH Reviewed; 520 AA.
AC Q8H965; Q9SMN8;
DT 11-DEC-2013, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2003, sequence version 1.
DT 25-MAY-2022, entry version 101.
DE RecName: Full=Non-specific phospholipase C6;
DE EC=3.1.-.-;
DE Flags: Precursor;
GN Name=NPC6; OrderedLocusNames=At3g48610;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], AND LACK OF INDUCTION BY PHOSPHATE DEPRIVATION.
RX PubMed=15618226; DOI=10.1074/jbc.m408799200;
RA Nakamura Y., Awai K., Masuda T., Yoshioka Y., Takamiya K., Ohta H.;
RT "A novel phosphatidylcholine-hydrolyzing phospholipase C induced by
RT phosphate starvation in Arabidopsis.";
RL J. Biol. Chem. 280:7469-7476(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP TISSUE SPECIFICITY.
RX PubMed=20507939; DOI=10.1093/mp/ssq005;
RA Wimalasekera R., Pejchar P., Holk A., Martinec J., Scherer G.F.;
RT "Plant phosphatidylcholine-hydrolyzing phospholipases C NPC3 and NPC4 with
RT roles in root development and brassinolide signaling in Arabidopsis
RT thaliana.";
RL Mol. Plant 3:610-625(2010).
CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000305}.
CC -!- TISSUE SPECIFICITY: Expressed in roots, leaves, stems, flowers and
CC siliques. {ECO:0000269|PubMed:20507939}.
CC -!- INDUCTION: Not induced by inorganic phosphate deprivation.
CC -!- SIMILARITY: Belongs to the bacterial phospholipase C family.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=CAB62350.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
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DR EMBL; AB084296; BAC22511.1; -; mRNA.
DR EMBL; AL133315; CAB62350.1; ALT_INIT; Genomic_DNA.
DR EMBL; CP002686; AEE78437.1; -; Genomic_DNA.
DR PIR; T46205; T46205.
DR RefSeq; NP_190430.2; NM_114720.4.
DR AlphaFoldDB; Q8H965; -.
DR SMR; Q8H965; -.
DR STRING; 3702.AT3G48610.1; -.
DR PaxDb; Q8H965; -.
DR PRIDE; Q8H965; -.
DR ProteomicsDB; 250541; -.
DR EnsemblPlants; AT3G48610.1; AT3G48610.1; AT3G48610.
DR GeneID; 824021; -.
DR Gramene; AT3G48610.1; AT3G48610.1; AT3G48610.
DR KEGG; ath:AT3G48610; -.
DR Araport; AT3G48610; -.
DR TAIR; locus:2114470; AT3G48610.
DR eggNOG; ENOG502QPJ0; Eukaryota.
DR HOGENOM; CLU_029943_1_0_1; -.
DR InParanoid; Q8H965; -.
DR OMA; FYQDAYL; -.
DR OrthoDB; 430314at2759; -.
DR PhylomeDB; Q8H965; -.
DR BRENDA; 3.1.4.3; 399.
DR PRO; PR:Q8H965; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q8H965; baseline and differential.
DR Genevisible; Q8H965; AT.
DR GO; GO:0009507; C:chloroplast; IDA:TAIR.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR GO; GO:0004629; F:phospholipase C activity; IDA:TAIR.
DR GO; GO:0048229; P:gametophyte development; IGI:TAIR.
DR GO; GO:0009395; P:phospholipid catabolic process; IDA:TAIR.
DR GO; GO:0048364; P:root development; IGI:TAIR.
DR Gene3D; 3.40.720.10; -; 2.
DR InterPro; IPR017850; Alkaline_phosphatase_core_sf.
DR InterPro; IPR007312; Phosphoesterase.
DR PANTHER; PTHR31956; PTHR31956; 1.
DR Pfam; PF04185; Phosphoesterase; 1.
DR SUPFAM; SSF53649; SSF53649; 1.
PE 2: Evidence at transcript level;
KW Hydrolase; Reference proteome; Secreted; Signal.
FT SIGNAL 1..31
FT /evidence="ECO:0000255"
FT CHAIN 32..520
FT /note="Non-specific phospholipase C6"
FT /id="PRO_0000424788"
SQ SEQUENCE 520 AA; 57911 MW; FB01292F133152D9 CRC64;
MKPSSASRFS LTFSHFLTLY CLLTQTHVAQ GSHQWQSPIK TVVVLVLENR SFDHLLGWMK
NSVNPTINGV TGQECNPVPN STQTICFTSD AEFVDPDPGH SFEAVEQQVF GSGPGQIPSM
MGFVEQALSM PGNLSETVMK GFRPEAVPVY AELVKEFAVF DRWFSSIPGP TQPNRLFVYS
ATSHGSTSHV KKQLAQGYPQ KTIFDSLHSN DIDFGIYFQN IPTTLFYRNL RQLKYIFNLH
QYDLKFKKDA AKGKLPSLTV IEPRYFDLKG LPANDDHPSH DVANGQKLVK EVYEALRSSP
QWNETLLVIT YDEHGGFYDH VKTPYVGIPN PDGNTGPAPG FFKFDRLGVR VPTIMVSPWI
QKGTVVSEAK GPTESSEYEH SSIPATIKKL FNLSSNFLTH RDAWAATFED VVSHLTTPRT
DCPMTLPEVA PMRATEPKED AALSEFQGEV VQLAAVLNGD HFLSSFPEEI GKKMTVKQAH
EYVKGATSRF IRASKEAMKL GADKSAIVDM RSSLTTRPHN