NR1BB_DANRE
ID NR1BB_DANRE Reviewed; 448 AA.
AC A1XQX3;
DT 21-SEP-2011, integrated into UniProtKB/Swiss-Prot.
DT 06-FEB-2007, sequence version 1.
DT 03-AUG-2022, entry version 76.
DE RecName: Full=Neurexin-1b-beta;
DE AltName: Full=Neurexin Ib-beta;
DE Flags: Precursor;
GN Name=nrxn1b;
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danio.
OX NCBI_TaxID=7955;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], DEVELOPMENTAL STAGE, AND ALTERNATIVE SPLICING.
RX PubMed=17041151; DOI=10.1093/molbev/msl147;
RA Rissone A., Monopoli M., Beltrame M., Bussolino F., Cotelli F., Arese M.;
RT "Comparative genome analysis of the neurexin gene family in Danio rerio:
RT insights into their functions and evolution.";
RL Mol. Biol. Evol. 24:236-252(2007).
CC -!- FUNCTION: Neuronal cell surface protein that may be involved in cell
CC recognition and cell adhesion. May play a role in formation or
CC maintenance of synaptic junctions.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Single-pass type I
CC membrane protein {ECO:0000305}.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative promoter usage, Alternative splicing; Named isoforms=2;
CC Comment=A number of isoforms, alpha-type and beta-type are produced
CC by alternative promoter usage. Beta-type isoforms differ from
CC alpha-type isoforms in their N-terminus.;
CC Name=Beta;
CC IsoId=A1XQX3-1; Sequence=Displayed;
CC Name=Alpha;
CC IsoId=A1XQX2-1; Sequence=External;
CC -!- DEVELOPMENTAL STAGE: After the very early developmental stages, the
CC expression levels decrease and remain relatively constant until around
CC 24 h, with the onset of an increase of expression that continues till
CC the larval stages. {ECO:0000269|PubMed:17041151}.
CC -!- SIMILARITY: Belongs to the neurexin family. {ECO:0000305}.
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DR EMBL; DQ641427; ABG25164.1; -; mRNA.
DR AlphaFoldDB; A1XQX3; -.
DR SMR; A1XQX3; -.
DR ZFIN; ZDB-GENE-070206-3; nrxn1b.
DR Proteomes; UP000000437; Genome assembly.
DR Proteomes; UP000814640; Unplaced.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0007155; P:cell adhesion; IEA:UniProtKB-KW.
DR CDD; cd00110; LamG; 1.
DR InterPro; IPR013320; ConA-like_dom_sf.
DR InterPro; IPR001791; Laminin_G.
DR InterPro; IPR003585; Neurexin-like.
DR InterPro; IPR027789; Syndecan/Neurexin_dom.
DR Pfam; PF02210; Laminin_G_2; 1.
DR Pfam; PF01034; Syndecan; 1.
DR SMART; SM00294; 4.1m; 1.
DR SMART; SM00282; LamG; 1.
DR SUPFAM; SSF49899; SSF49899; 1.
DR PROSITE; PS50025; LAM_G_DOMAIN; 1.
PE 2: Evidence at transcript level;
KW Alternative promoter usage; Alternative splicing; Cell adhesion; Membrane;
KW Reference proteome; Signal; Transmembrane; Transmembrane helix.
FT SIGNAL 1..38
FT /evidence="ECO:0000255"
FT CHAIN 39..448
FT /note="Neurexin-1b-beta"
FT /id="PRO_0000412540"
FT TOPO_DOM 39..375
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 376..396
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 397..448
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT DOMAIN 71..269
FT /note="Laminin G-like"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00122"
FT REGION 426..448
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 448 AA; 49054 MW; E64E985EE9DBF533 CRC64;
MFGGWRLVVW QIFSEIITRR LGFWICLYFA ALSVGMISGS EPLVRTRHIQ NTHTVPINRS
PGSLRAWQAG STYVFGRQGG VITYSWPPHD RPSTRVDRLA LGFSTLMEDA TLVRVDSSAG
LGDYLKLHIV KGNVVAVFNV GTYDINIEEK AKLVNDGNYH IVRFTRSGGN ATLQVDDLPV
IERFPPGHID SHRLGTGRLP YRRLVEESLP KNGRQLTIFN SQMTIRIGGW QKQQVSGFQG
QMSGFYYNGL KVFSMAADGD PNVRMEGSVR LVGELQSSST PHGGATVYQS SVTEISSTTS
NTITITYSTP ADEQQTTDEL LVASAECPSD DEDIDPCEPS SGTLCCFVPP AGPTGPAISS
FPGPAEVFRE SNGTTGMVVG IVAGAALCIL ILLYAMYKYR NRDEGSYHVD ESRNYICNSN
GAALKEKNTA DDDSGSKSKK NKNKEYYV