NR2F5_DANRE
ID NR2F5_DANRE Reviewed; 403 AA.
AC Q06726;
DT 15-JUL-1999, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1996, sequence version 1.
DT 03-AUG-2022, entry version 153.
DE RecName: Full=Nuclear receptor subfamily 2 group F member 5;
DE AltName: Full=Steroid receptor homolog SVP 46;
GN Name=nr2f5; Synonyms=svp46;
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danio.
OX NCBI_TaxID=7955;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RX PubMed=8467797; DOI=10.1002/j.1460-2075.1993.tb05784.x;
RA Fjose A., Nornes S., Weber U., Mlodzik M.;
RT "Functional conservation of vertebrate seven-up related genes in
RT neurogenesis and eye development.";
RL EMBO J. 12:1403-1414(1993).
CC -!- FUNCTION: Putative receptor that is required in photoreceptor cells
CC precursors during eye development.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00407}.
CC -!- SIMILARITY: Belongs to the nuclear hormone receptor family. NR2
CC subfamily. {ECO:0000305}.
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DR EMBL; X70300; CAA49781.1; -; mRNA.
DR PIR; S35334; S35334.
DR RefSeq; NP_571261.1; NM_131186.1.
DR AlphaFoldDB; Q06726; -.
DR SMR; Q06726; -.
DR STRING; 7955.ENSDARP00000040768; -.
DR PaxDb; Q06726; -.
DR Ensembl; ENSDART00000040769; ENSDARP00000040768; ENSDARG00000033172.
DR GeneID; 30427; -.
DR KEGG; dre:30427; -.
DR CTD; 30427; -.
DR ZFIN; ZDB-GENE-990415-253; nr2f5.
DR eggNOG; KOG3575; Eukaryota.
DR GeneTree; ENSGT00940000165753; -.
DR HOGENOM; CLU_007368_20_1_1; -.
DR InParanoid; Q06726; -.
DR OMA; NDPYNGQ; -.
DR OrthoDB; 666130at2759; -.
DR PhylomeDB; Q06726; -.
DR TreeFam; TF352097; -.
DR PRO; PR:Q06726; -.
DR Proteomes; UP000000437; Genome assembly.
DR Proteomes; UP000814640; Chromosome 16.
DR Bgee; ENSDARG00000033172; Expressed in somite and 71 other tissues.
DR ExpressionAtlas; Q06726; baseline.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0004879; F:nuclear receptor activity; IBA:GO_Central.
DR GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0048856; P:anatomical structure development; IBA:GO_Central.
DR GO; GO:0030154; P:cell differentiation; IBA:GO_Central.
DR GO; GO:1904888; P:cranial skeletal system development; IGI:ZFIN.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR GO; GO:0032526; P:response to retinoic acid; IMP:ZFIN.
DR GO; GO:0007601; P:visual perception; IEA:UniProtKB-KW.
DR Gene3D; 1.10.565.10; -; 1.
DR Gene3D; 3.30.50.10; -; 1.
DR InterPro; IPR035500; NHR-like_dom_sf.
DR InterPro; IPR000536; Nucl_hrmn_rcpt_lig-bd.
DR InterPro; IPR001723; Nuclear_hrmn_rcpt.
DR InterPro; IPR001628; Znf_hrmn_rcpt.
DR InterPro; IPR013088; Znf_NHR/GATA.
DR Pfam; PF00104; Hormone_recep; 1.
DR Pfam; PF00105; zf-C4; 1.
DR PRINTS; PR00398; STRDHORMONER.
DR PRINTS; PR00047; STROIDFINGER.
DR SMART; SM00430; HOLI; 1.
DR SMART; SM00399; ZnF_C4; 1.
DR SUPFAM; SSF48508; SSF48508; 1.
DR PROSITE; PS51843; NR_LBD; 1.
DR PROSITE; PS00031; NUCLEAR_REC_DBD_1; 1.
DR PROSITE; PS51030; NUCLEAR_REC_DBD_2; 1.
PE 2: Evidence at transcript level;
KW DNA-binding; Metal-binding; Nucleus; Receptor; Reference proteome;
KW Sensory transduction; Transcription; Transcription regulation; Vision;
KW Zinc; Zinc-finger.
FT CHAIN 1..403
FT /note="Nuclear receptor subfamily 2 group F member 5"
FT /id="PRO_0000053612"
FT DOMAIN 152..378
FT /note="NR LBD"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01189"
FT DNA_BIND 51..126
FT /note="Nuclear receptor"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00407"
FT ZN_FING 54..74
FT /note="NR C4-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00407"
FT ZN_FING 90..114
FT /note="NR C4-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00407"
FT REGION 16..44
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 403 AA; 45081 MW; 0848319E2EBEEE62 CRC64;
MAMVVNQWQE NISADPGSQL QMCSQEPGGT PGTPSGSTPG NDALSGDKIP NVDCMVCGDK
SSGKHYGQFT CEGCKSFFKR SVRRNLSYTC RGNRDCPIDQ HHRNQCQYCR LKKCLKVGMR
REAVQRGRMS NSQSSPGQYL SNGSDPYNGQ PYLSGFISLL LRAEPYPTSR YGAQCMQSNN
LMGIENICEL AARLLFSAVE WAKNIPFFPD LQLMDQVALL RMSWSELFVL NAAQCSMPLH
VAPLLAAAGL HASPMSAERV VAFMDHIRVF QEQVEKLKAL QVDTAEYSCL KSIVLFTSDA
MGLSDVAHVE SIQEKSQCAL EEYVRNQYPN QPNRFGRLLL RLPSLRIVSS PVIEQLFFVR
LVGKTPIETL LRDMLLSGSS YNWPYMPVQR DRPISIHYNE NGP