NRDE2_SCHPO
ID NRDE2_SCHPO Reviewed; 972 AA.
AC O42975;
DT 01-JUL-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-1998, sequence version 1.
DT 03-AUG-2022, entry version 111.
DE RecName: Full=Protein NRDE2 homolog;
GN ORFNames=SPBC20F10.05;
OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina;
OC Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae;
OC Schizosaccharomyces.
OX NCBI_TaxID=284812;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=972 / ATCC 24843;
RX PubMed=11859360; DOI=10.1038/nature724;
RA Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A.,
RA Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S.,
RA Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.,
RA Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S.,
RA Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S.,
RA Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D.,
RA Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P.,
RA Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K.,
RA O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M.,
RA Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N.,
RA Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A.,
RA Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R.,
RA Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M.,
RA Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A.,
RA Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A.,
RA Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H.,
RA Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S.,
RA Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C.,
RA Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A.,
RA Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M.,
RA del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S.,
RA Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R.,
RA Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G.,
RA Nurse P.;
RT "The genome sequence of Schizosaccharomyces pombe.";
RL Nature 415:871-880(2002).
RN [2]
RP SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].
RX PubMed=16823372; DOI=10.1038/nbt1222;
RA Matsuyama A., Arai R., Yashiroda Y., Shirai A., Kamata A., Sekido S.,
RA Kobayashi Y., Hashimoto A., Hamamoto M., Hiraoka Y., Horinouchi S.,
RA Yoshida M.;
RT "ORFeome cloning and global analysis of protein localization in the fission
RT yeast Schizosaccharomyces pombe.";
RL Nat. Biotechnol. 24:841-847(2006).
RN [3]
RP PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-970, AND IDENTIFICATION BY
RP MASS SPECTROMETRY.
RX PubMed=18257517; DOI=10.1021/pr7006335;
RA Wilson-Grady J.T., Villen J., Gygi S.P.;
RT "Phosphoproteome analysis of fission yeast.";
RL J. Proteome Res. 7:1088-1097(2008).
CC -!- INTERACTION:
CC O42975; O94316: cwf10; NbExp=3; IntAct=EBI-9003631, EBI-538866;
CC O42975; O13799: SPAC17H9.02; NbExp=3; IntAct=EBI-9003631, EBI-8993901;
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:16823372}.
CC -!- SIMILARITY: Belongs to the NRDE2 family. {ECO:0000305}.
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DR EMBL; CU329671; CAA16845.1; -; Genomic_DNA.
DR PIR; T39876; T39876.
DR RefSeq; NP_596369.1; NM_001022290.2.
DR AlphaFoldDB; O42975; -.
DR BioGRID; 277216; 57.
DR IntAct; O42975; 10.
DR STRING; 4896.SPBC20F10.05.1; -.
DR iPTMnet; O42975; -.
DR SwissPalm; O42975; -.
DR MaxQB; O42975; -.
DR PaxDb; O42975; -.
DR PRIDE; O42975; -.
DR EnsemblFungi; SPBC20F10.05.1; SPBC20F10.05.1:pep; SPBC20F10.05.
DR GeneID; 2540691; -.
DR KEGG; spo:SPBC20F10.05; -.
DR PomBase; SPBC20F10.05; -.
DR VEuPathDB; FungiDB:SPBC20F10.05; -.
DR eggNOG; KOG1972; Eukaryota.
DR HOGENOM; CLU_312419_0_0_1; -.
DR InParanoid; O42975; -.
DR OMA; CKEREST; -.
DR PhylomeDB; O42975; -.
DR PRO; PR:O42975; -.
DR Proteomes; UP000002485; Chromosome II.
DR GO; GO:0005634; C:nucleus; HDA:PomBase.
DR GO; GO:0005681; C:spliceosomal complex; EXP:PomBase.
DR GO; GO:1902369; P:negative regulation of RNA catabolic process; IBA:GO_Central.
DR GO; GO:1902802; P:regulation of siRNA-dependent facultative heterochromatin assembly; IGI:PomBase.
DR Gene3D; 1.25.40.10; -; 1.
DR InterPro; IPR013633; NRDE-2.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR PANTHER; PTHR13471; PTHR13471; 1.
DR Pfam; PF08424; NRDE-2; 1.
PE 1: Evidence at protein level;
KW Nucleus; Phosphoprotein; Reference proteome; Repeat.
FT CHAIN 1..972
FT /note="Protein NRDE2 homolog"
FT /id="PRO_0000343144"
FT REPEAT 159..191
FT /note="HAT 1"
FT REPEAT 250..282
FT /note="HAT 2"
FT REPEAT 318..350
FT /note="HAT 3"
FT REPEAT 355..386
FT /note="HAT 4"
FT REPEAT 608..640
FT /note="HAT 5"
FT REPEAT 788..820
FT /note="HAT 6"
FT REPEAT 860..894
FT /note="HAT 7"
FT REGION 1..61
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..23
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 39..61
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOD_RES 970
FT /note="Phosphoserine"
FT /evidence="ECO:0000269|PubMed:18257517"
SQ SEQUENCE 972 AA; 113249 MW; 39EA1551A2C5DD8F CRC64;
MPSNHNTSVP KFSSFNSVKA KKNPITKSNK KYRSSHDQVS SNHAKSSFPS HRSIQSNFAV
DTKGEKQNLL YGINKRPVPK YHRSSSSVYG SAPLLRIVKE SKEGITLNKK KSLEIKYDEE
RSFDEKENDE SEFEDGQQGF IPLLVNRNSD PSEKSTFSLN ILKAIKETDE EIKKNPGKAR
LWIKMCEYQE RLLFDEFRRS NSDDIKGKLK IENNSRSVKL SILEKALKEV KGCDHEILVS
YYLQLGSEEW SKEETNQKFE EVLIEHPGYL NLWMKYAEYF TGISEFTFND CLNMFSKCFK
FLKQKLSDRK SCKERESTDV TSNFEVEEAI LHLLIRLCDF LKNCGYYELA WSIFQANMEL
CYFYPRYLEK KLDSTFFESF SKFWNSDTPK FSEENARGWC NVLDDESSQQ NQNFSSEIGI
FQTVKLWYLN ESKFDTNPPP RSTMSCRKLS GIDDPFRYIV FNDIQDFIVC FESETIAFAF
KYKFFAFCGV PLFPPGISTN SWFASYDKGI YNLLFGMASS ESFINGQIAE KNSFQFPCSI
LPSYIDLFIS LMSFKNLNFK LFDYNLAHHV KESMERAFHQ LVFSADDEYL ASVYLIYLKQ
METKNLSEEK PQVNKIVKKI LKKYDSSVSV WNTYAQLEHL SGAFTMAETI FKTIFQIHAS
QLRYIDNLNV YKNWAFRKLL INDTEGCLVI IKCLLFPGDK SLTSDNNRAS EMLFGMLENC
ASKEELLYVC LIYTIWTHCT DMDSMDNCVY LCIQKFESYG WGASSEMECY FSYCSLIFYY
QATTLQFYNL PKVRPFFEKG VTLFSANTAI WEVYIFFESK LRQENKPKIR AMKILKSASN
AVVTACWYLF YVAVQQIEPT NSQYFLRTLD ITLNNEKLKS VAKFWRIYLK ILNLRLNGTE
WVSAITTKAL ASCPCNKGVC MDVIDLLLKK EMESRAIICY IIMLEKGFRV HNEIRRDVLK
FERGDELILS PN