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NRIP1_MOUSE
ID   NRIP1_MOUSE             Reviewed;        1161 AA.
AC   Q8CBD1; Q3U166; Q8C3Y8; Q9Z2K2;
DT   08-NOV-2005, integrated into UniProtKB/Swiss-Prot.
DT   01-MAR-2003, sequence version 1.
DT   03-AUG-2022, entry version 144.
DE   RecName: Full=Nuclear receptor-interacting protein 1;
DE   AltName: Full=Nuclear factor RIP140;
DE   AltName: Full=Receptor-interacting protein 140;
GN   Name=Nrip1 {ECO:0000312|MGI:MGI:1315213};
OS   Mus musculus (Mouse).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC   Murinae; Mus; Mus.
OX   NCBI_TaxID=10090;
RN   [1] {ECO:0000305, ECO:0000312|EMBL:AAC69611.1}
RP   NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, TISSUE SPECIFICITY, AND INTERACTION
RP   WITH NR2C1 AND RARA.
RC   STRAIN=ICR {ECO:0000312|EMBL:AAC69611.1};
RC   TISSUE=Embryo {ECO:0000269|PubMed:9774688};
RX   PubMed=9774688; DOI=10.1128/mcb.18.11.6745;
RA   Lee C.-H., Chinpaisal C., Wei L.-N.;
RT   "Cloning and characterization of mouse RIP140, a corepressor for nuclear
RT   orphan receptor TR2.";
RL   Mol. Cell. Biol. 18:6745-6755(1998).
RN   [2] {ECO:0000312|EMBL:BAC29368.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=C57BL/6J {ECO:0000312|EMBL:BAC29368.1}, and NOD;
RC   TISSUE=Cerebellum {ECO:0000312|EMBL:BAC29368.1},
RC   Heart {ECO:0000312|EMBL:BAC39197.1}, and Spleen;
RX   PubMed=16141072; DOI=10.1126/science.1112014;
RA   Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N.,
RA   Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K.,
RA   Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.,
RA   Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R.,
RA   Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T.,
RA   Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A.,
RA   Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B.,
RA   Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M.,
RA   Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S.,
RA   Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E.,
RA   Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D.,
RA   Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M.,
RA   Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H.,
RA   Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V.,
RA   Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S.,
RA   Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H.,
RA   Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N.,
RA   Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F.,
RA   Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G.,
RA   Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z.,
RA   Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C.,
RA   Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y.,
RA   Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S.,
RA   Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K.,
RA   Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R.,
RA   van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H.,
RA   Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M.,
RA   Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C.,
RA   Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S.,
RA   Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K.,
RA   Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M.,
RA   Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C.,
RA   Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A.,
RA   Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.;
RT   "The transcriptional landscape of the mammalian genome.";
RL   Science 309:1559-1563(2005).
RN   [3] {ECO:0000312|EMBL:AAH60232.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=C57BL/6J {ECO:0000312|EMBL:AAH60232.1};
RC   TISSUE=Brain {ECO:0000312|EMBL:AAH60232.1};
RX   PubMed=15489334; DOI=10.1101/gr.2596504;
RG   The MGC Project Team;
RT   "The status, quality, and expansion of the NIH full-length cDNA project:
RT   the Mammalian Gene Collection (MGC).";
RL   Genome Res. 14:2121-2127(2004).
RN   [4] {ECO:0000305}
RP   PROTEIN SEQUENCE OF 101-112; 155-170; 283-298; 305-320; 476-492; 517-537;
RP   606-630 AND 930-938, IDENTIFICATION BY MASS SPECTROMETRY, SUBCELLULAR
RP   LOCATION, AND ACETYLATION AT LYS-111; LYS-158; LYS-287; LYS-311; LYS-482;
RP   LYS-529; LYS-607 AND LYS-932.
RX   PubMed=15879431; DOI=10.1074/mcp.m500015-mcp200;
RA   Huq M.D.M., Wei L.-N.;
RT   "Post-translational modification of nuclear co-repressor receptor-
RT   interacting protein 140 by acetylation.";
RL   Mol. Cell. Proteomics 4:975-983(2005).
RN   [5] {ECO:0000305}
RP   PROTEIN SEQUENCE OF 101-112; 199-212; 343-360; 375-387; 476-492; 517-548;
RP   670-678 AND 1001-1009, IDENTIFICATION BY MASS SPECTROMETRY, AND
RP   PHOSPHORYLATION AT SER-104; THR-207; SER-358; SER-380; SER-488; SER-519;
RP   SER-531; SER-543; SER-672 AND SER-1003.
RX   PubMed=15846843; DOI=10.1002/pmic.200401090;
RA   Huq M.D.M., Khan S.A., Park S.W., Wei L.-N.;
RT   "Mapping of phosphorylation sites of nuclear corepressor receptor
RT   interacting protein 140 by liquid chromatography-tandem mass
RT   spectroscopy.";
RL   Proteomics 5:2157-2166(2005).
RN   [6] {ECO:0000305}
RP   FUNCTION, AND INTERACTION WITH RARA AND RXRB.
RX   PubMed=10531331; DOI=10.1074/jbc.274.44.31320;
RA   Lee C.-H., Wei L.-N.;
RT   "Characterization of receptor-interacting protein 140 in retinoid receptor
RT   activities.";
RL   J. Biol. Chem. 274:31320-31326(1999).
RN   [7] {ECO:0000305}
RP   INTERACTION WITH HDAC1 AND HDAC3.
RX   PubMed=11006275; DOI=10.1074/jbc.m004821200;
RA   Wei L.-N., Hu X., Chandra D., Seto E., Farooqui M.;
RT   "Receptor-interacting protein 140 directly recruits histone deacetylases
RT   for gene silencing.";
RL   J. Biol. Chem. 275:40782-40787(2000).
RN   [8] {ECO:0000305}
RP   FUNCTION, TISSUE SPECIFICITY, AND DISRUPTION PHENOTYPE.
RX   PubMed=11100122; DOI=10.1038/82183;
RA   White R., Leonardsson G., Rosewell I., Jacobs M.A., Milligan S.,
RA   Parker M.G.;
RT   "The nuclear receptor co-repressor Nrip1 (RIP140) is essential for female
RT   fertility.";
RL   Nat. Med. 6:1368-1374(2000).
RN   [9] {ECO:0000305}
RP   INTERACTION WITH RARA AND RXRB, AND IDENTIFICATION IN A COMPLEX WITH HDAC3.
RX   PubMed=11278635; DOI=10.1074/jbc.m010185200;
RA   Wei L.-N., Farooqui M., Hu X.;
RT   "Ligand-dependent formation of retinoid receptors, receptor-interacting
RT   protein 140 (RIP140), and histone deacetylase complex is mediated by a
RT   novel receptor-interacting motif of RIP140.";
RL   J. Biol. Chem. 276:16107-16112(2001).
RN   [10] {ECO:0000305}
RP   INTERACTION WITH RARA AND RXRB, AND MUTAGENESIS OF ASN-1067; PRO-1068 AND
RP   MET-1073.
RX   PubMed=12549917; DOI=10.1021/bi020497k;
RA   Farooqui M., Franco P.J., Thompson J., Kagechika H., Chandraratna R.A.S.,
RA   Banaszak L., Wei L.-N.;
RT   "Effects of retinoid ligands on RIP140: molecular interaction with retinoid
RT   receptors and biological activity.";
RL   Biochemistry 42:971-979(2003).
RN   [11] {ECO:0000305}
RP   FUNCTION.
RX   PubMed=15130509; DOI=10.1016/j.mce.2003.12.010;
RA   Wei L.-N., Hu X.;
RT   "Receptor interacting protein 140 as a thyroid hormone-dependent, negative
RT   co-regulator for the induction of cellular retinoic acid binding protein I
RT   gene.";
RL   Mol. Cell. Endocrinol. 218:39-48(2004).
RN   [12] {ECO:0000305}
RP   FUNCTION, AND TISSUE SPECIFICITY.
RX   PubMed=15155905; DOI=10.1073/pnas.0401013101;
RA   Leonardsson G., Steel J.H., Christian M., Pocock V., Milligan S., Bell J.,
RA   So P.-W., Medina-Gomez G., Vidal-Puig A., White R., Parker M.G.;
RT   "Nuclear receptor corepressor RIP140 regulates fat accumulation.";
RL   Proc. Natl. Acad. Sci. U.S.A. 101:8437-8442(2004).
RN   [13] {ECO:0000305}
RP   FUNCTION.
RX   PubMed=15919748; DOI=10.1210/en.2005-0348;
RA   Tullet J.M.A., Pocock V., Steel J.H., White R., Milligan S., Parker M.G.;
RT   "Multiple signaling defects in the absence of RIP140 impair both cumulus
RT   expansion and follicle rupture.";
RL   Endocrinology 146:4127-4137(2005).
RN   [14]
RP   INTERACTION WITH NR2C1.
RX   PubMed=17187077; DOI=10.1038/nsmb1185;
RA   Park S.W., Hu X., Gupta P., Lin Y.P., Ha S.G., Wei L.N.;
RT   "SUMOylation of Tr2 orphan receptor involves Pml and fine-tunes Oct4
RT   expression in stem cells.";
RL   Nat. Struct. Mol. Biol. 14:68-75(2007).
RN   [15]
RP   INTERACTION WITH NR2C1.
RX   PubMed=18682553; DOI=10.1073/pnas.0710561105;
RA   Gupta P., Ho P.C., Huq M.M., Ha S.G., Park S.W., Khan A.A., Tsai N.P.,
RA   Wei L.N.;
RT   "Retinoic acid-stimulated sequential phosphorylation, PML recruitment, and
RT   SUMOylation of nuclear receptor TR2 to suppress Oct4 expression.";
RL   Proc. Natl. Acad. Sci. U.S.A. 105:11424-11429(2008).
RN   [16]
RP   FUNCTION, AND INTERACTION WITH RORA.
RX   PubMed=21628546; DOI=10.1177/0748730411401579;
RA   Poliandri A.H., Gamsby J.J., Christian M., Spinella M.J., Loros J.J.,
RA   Dunlap J.C., Parker M.G.;
RT   "Modulation of clock gene expression by the transcriptional coregulator
RT   receptor interacting protein 140 (RIP140).";
RL   J. Biol. Rhythms 26:187-199(2011).
RN   [17]
RP   FUNCTION, AND DISRUPTION PHENOTYPE.
RX   PubMed=28381549; DOI=10.1681/asn.2016060694;
RA   Vivante A., Mann N., Yonath H., Weiss A.C., Getwan M., Kaminski M.M.,
RA   Bohnenpoll T., Teyssier C., Chen J., Shril S., van der Ven A.T., Ityel H.,
RA   Schmidt J.M., Widmeier E., Bauer S.B., Sanna-Cherchi S., Gharavi A.G.,
RA   Lu W., Magen D., Shukrun R., Lifton R.P., Tasic V., Stanescu H.C.,
RA   Cavailles V., Kleta R., Anikster Y., Dekel B., Kispert A., Lienkamp S.S.,
RA   Hildebrandt F.;
RT   "A dominant mutation in nuclear receptor interacting protein 1 causes
RT   urinary tract malformations via dysregulation of retinoic acid signaling.";
RL   J. Am. Soc. Nephrol. 28:2364-2376(2017).
CC   -!- FUNCTION: Modulates transcriptional repression by nuclear hormone
CC       receptors such as NR2C1, thyroid hormone receptor and retinoic acid
CC       receptor/RARA. Essential for cumulus expansion and follicle rupture
CC       during ovulation. Also controls the balance between fat accumulation
CC       and energy expenditure. Positive regulator of the circadian clock gene
CC       expression: stimulates transcription of ARNTL/BMAL1, CLOCK and CRY1 by
CC       acting as a coactivator for RORA and RORC. Involved in the regulation
CC       of ovarian function (PubMed:11100122). Plays a role in renal
CC       development (PubMed:28381549). {ECO:0000269|PubMed:10531331,
CC       ECO:0000269|PubMed:11100122, ECO:0000269|PubMed:15130509,
CC       ECO:0000269|PubMed:15155905, ECO:0000269|PubMed:15919748,
CC       ECO:0000269|PubMed:21628546, ECO:0000269|PubMed:28381549,
CC       ECO:0000269|PubMed:9774688}.
CC   -!- SUBUNIT: Interacts with CTBP1, CTBP2, ERS1, HDAC1, HDAC2, HDAC5, HDAC6,
CC       NR2C2, NR3C1, NR3C2, YWHAH, JUN and FOS. Found in a complex with both
CC       NR3C1 and YWHAH (By similarity). Interacts with NR2C1 (sumoylated form
CC       and via the ligand-binding domain); the interaction results in
CC       promoting the repressor activity of NR2C1. Interacts with RARA and RXRB
CC       homodimers and RARA/RXRB heterodimers in the presence of ligand.
CC       Interacts with HDAC1 and HDAC3 via its N-terminal domain. Interacts
CC       with ZNF366 (By similarity). Interacts with RORA.
CC       {ECO:0000250|UniProtKB:P48552, ECO:0000269|PubMed:21628546}.
CC   -!- INTERACTION:
CC       Q8CBD1; Q505F1: Nr2c1; NbExp=3; IntAct=EBI-1771626, EBI-15617004;
CC       Q8CBD1; O15379: HDAC3; Xeno; NbExp=2; IntAct=EBI-1771626, EBI-607682;
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:15879431}.
CC   -!- TISSUE SPECIFICITY: Expressed in the embryonic placenta. In the adult,
CC       expression is strong in the testis and brain. Also expressed at a high
CC       level in the white adipose tissue. Expressed constantly but at a weaker
CC       level in the adult heart, lung, stomach and kidney. Expressed
CC       moderately in the skeletal muscle. Expressed at a low level in the
CC       adult spleen, liver and brown adipose tissue. Expressed in the ovary at
CC       a high level in granulosa cells and at a lower level in the thecal and
CC       interstitial compartments. {ECO:0000269|PubMed:11100122,
CC       ECO:0000269|PubMed:15155905, ECO:0000269|PubMed:9774688}.
CC   -!- DOMAIN: Contains at least 4 autonomous repression domains (RD1-4).
CC       {ECO:0000250}.
CC   -!- DOMAIN: Contains 9 Leu-Xaa-Xaa-Leu-Leu (LXXLL) motifs, which have
CC       different affinities for nuclear receptors.
CC   -!- DOMAIN: The Ligand-dependent nuclear receptor binding region is
CC       required for ligand-dependent interaction with RAAR and RXRB homo- and
CC       heterodimers, for the corepressor activity, and for the formation of an
CC       HDAC3 complex with RARA/RXRB.
CC   -!- PTM: Acetylation abolishes interaction with CTBP1. Phosphorylation
CC       enhances interaction with YWHAH (By similarity). Acetylation regulates
CC       its nuclear translocation and corepressive activity.
CC       {ECO:0000250|UniProtKB:P48552, ECO:0000269|PubMed:15846843,
CC       ECO:0000269|PubMed:15879431}.
CC   -!- DISRUPTION PHENOTYPE: Mice are viable and morphologically normal, but
CC       smaller than wild-type and heterozygous littermates. Homozygous NRIP1-
CC       null mature female are defective in ovulation and completely infertile
CC       (PubMed:11100122). Embryos with heterozygous NRIP1 loss show anomalies
CC       of the urinary tract including dysplastic kidneys with cystic
CC       dilations, severe hydoureter with hydronephrosis and ureterocele
CC       (PubMed:28381549). {ECO:0000269|PubMed:11100122,
CC       ECO:0000269|PubMed:28381549}.
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DR   EMBL; AF053062; AAC69611.1; -; mRNA.
DR   EMBL; AK036273; BAC29368.1; -; mRNA.
DR   EMBL; AK084498; BAC39197.1; -; mRNA.
DR   EMBL; AK156233; BAE33634.1; -; mRNA.
DR   EMBL; BC060232; AAH60232.1; -; mRNA.
DR   CCDS; CCDS28274.1; -.
DR   RefSeq; NP_775616.1; NM_173440.2.
DR   RefSeq; XP_006523113.1; XM_006523050.2.
DR   RefSeq; XP_006523114.1; XM_006523051.3.
DR   RefSeq; XP_006523117.1; XM_006523054.2.
DR   RefSeq; XP_017172509.1; XM_017317020.1.
DR   AlphaFoldDB; Q8CBD1; -.
DR   BioGRID; 234576; 16.
DR   DIP; DIP-29280N; -.
DR   IntAct; Q8CBD1; 6.
DR   MINT; Q8CBD1; -.
DR   STRING; 10090.ENSMUSP00000051726; -.
DR   iPTMnet; Q8CBD1; -.
DR   PhosphoSitePlus; Q8CBD1; -.
DR   MaxQB; Q8CBD1; -.
DR   PaxDb; Q8CBD1; -.
DR   PeptideAtlas; Q8CBD1; -.
DR   PRIDE; Q8CBD1; -.
DR   ProteomicsDB; 253016; -.
DR   Antibodypedia; 5789; 238 antibodies from 34 providers.
DR   DNASU; 268903; -.
DR   Ensembl; ENSMUST00000054178; ENSMUSP00000051726; ENSMUSG00000048490.
DR   Ensembl; ENSMUST00000121927; ENSMUSP00000112959; ENSMUSG00000048490.
DR   GeneID; 268903; -.
DR   KEGG; mmu:268903; -.
DR   UCSC; uc007zrx.1; mouse.
DR   CTD; 8204; -.
DR   MGI; MGI:1315213; Nrip1.
DR   VEuPathDB; HostDB:ENSMUSG00000048490; -.
DR   eggNOG; ENOG502QS1C; Eukaryota.
DR   GeneTree; ENSGT00390000007999; -.
DR   HOGENOM; CLU_008553_0_0_1; -.
DR   InParanoid; Q8CBD1; -.
DR   OMA; RSGAWND; -.
DR   OrthoDB; 345693at2759; -.
DR   PhylomeDB; Q8CBD1; -.
DR   TreeFam; TF332210; -.
DR   Reactome; R-MMU-3899300; SUMOylation of transcription cofactors.
DR   Reactome; R-MMU-9018519; Estrogen-dependent gene expression.
DR   BioGRID-ORCS; 268903; 6 hits in 75 CRISPR screens.
DR   ChiTaRS; Nrip1; mouse.
DR   PRO; PR:Q8CBD1; -.
DR   Proteomes; UP000000589; Chromosome 16.
DR   RNAct; Q8CBD1; protein.
DR   Bgee; ENSMUSG00000048490; Expressed in metanephric cortical collecting duct and 280 other tissues.
DR   ExpressionAtlas; Q8CBD1; baseline and differential.
DR   Genevisible; Q8CBD1; MM.
DR   GO; GO:0000785; C:chromatin; ISO:MGI.
DR   GO; GO:0005829; C:cytosol; ISO:MGI.
DR   GO; GO:0001650; C:fibrillar center; ISO:MGI.
DR   GO; GO:0000118; C:histone deacetylase complex; IPI:UniProtKB.
DR   GO; GO:0016607; C:nuclear speck; IDA:MGI.
DR   GO; GO:0005730; C:nucleolus; ISO:MGI.
DR   GO; GO:0005654; C:nucleoplasm; ISO:MGI.
DR   GO; GO:0005634; C:nucleus; IDA:UniProtKB.
DR   GO; GO:0042826; F:histone deacetylase binding; IPI:UniProtKB.
DR   GO; GO:0030331; F:nuclear estrogen receptor binding; ISO:MGI.
DR   GO; GO:0035259; F:nuclear glucocorticoid receptor binding; ISO:MGI.
DR   GO; GO:0016922; F:nuclear receptor binding; ISO:MGI.
DR   GO; GO:0042974; F:nuclear retinoic acid receptor binding; IPI:UniProtKB.
DR   GO; GO:0046965; F:nuclear retinoid X receptor binding; IPI:UniProtKB.
DR   GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; ISS:UniProtKB.
DR   GO; GO:0005102; F:signaling receptor binding; IPI:UniProtKB.
DR   GO; GO:0003713; F:transcription coactivator activity; IDA:UniProtKB.
DR   GO; GO:0003714; F:transcription corepressor activity; IDA:UniProtKB.
DR   GO; GO:0071392; P:cellular response to estradiol stimulus; ISO:MGI.
DR   GO; GO:0032922; P:circadian regulation of gene expression; IMP:UniProtKB.
DR   GO; GO:0019915; P:lipid storage; IMP:UniProtKB.
DR   GO; GO:0000122; P:negative regulation of transcription by RNA polymerase II; IDA:MGI.
DR   GO; GO:0001543; P:ovarian follicle rupture; IMP:UniProtKB.
DR   GO; GO:0030728; P:ovulation; IMP:UniProtKB.
DR   GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; ISO:MGI.
DR   GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IDA:MGI.
DR   InterPro; IPR026649; NRIP1.
DR   InterPro; IPR031405; NRIP1_RD1.
DR   InterPro; IPR031406; NRIP1_RD2.
DR   InterPro; IPR031407; NRIP1_RD3.
DR   InterPro; IPR031408; NRIP1_RD4.
DR   PANTHER; PTHR15088; PTHR15088; 1.
DR   Pfam; PF15687; NRIP1_repr_1; 1.
DR   Pfam; PF15688; NRIP1_repr_2; 1.
DR   Pfam; PF15689; NRIP1_repr_3; 1.
DR   Pfam; PF15690; NRIP1_repr_4; 1.
PE   1: Evidence at protein level;
KW   Acetylation; Activator; Biological rhythms; Direct protein sequencing;
KW   Isopeptide bond; Nucleus; Phosphoprotein; Receptor; Reference proteome;
KW   Repeat; Repressor; Transcription; Transcription regulation;
KW   Ubl conjugation.
FT   CHAIN           1..1161
FT                   /note="Nuclear receptor-interacting protein 1"
FT                   /id="PRO_0000057952"
FT   REGION          1..416
FT                   /note="Interaction with ZNF366"
FT                   /evidence="ECO:0000250"
FT   REGION          34..68
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          78..335
FT                   /note="Repression domain 1"
FT                   /evidence="ECO:0000250|UniProtKB:P48552"
FT   REGION          393..436
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          411..701
FT                   /note="Repression domain 2"
FT                   /evidence="ECO:0000250|UniProtKB:P48552"
FT   REGION          432..473
FT                   /note="Required for targeting to small nuclear foci"
FT                   /evidence="ECO:0000250|UniProtKB:P48552"
FT   REGION          517..559
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          604..623
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          639..702
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          717..747
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          736..886
FT                   /note="Repression domain 3"
FT                   /evidence="ECO:0000250|UniProtKB:P48552"
FT   REGION          754..1161
FT                   /note="Interaction with ZNF366"
FT                   /evidence="ECO:0000250"
FT   REGION          829..848
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          950..976
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1063..1076
FT                   /note="Ligand-dependent nuclear receptor binding"
FT   REGION          1121..1161
FT                   /note="Repression domain 4"
FT                   /evidence="ECO:0000250|UniProtKB:P48552"
FT   MOTIF           21..25
FT                   /note="LXXLL motif 1"
FT                   /evidence="ECO:0000255"
FT   MOTIF           133..137
FT                   /note="LXXLL motif 2"
FT                   /evidence="ECO:0000255"
FT   MOTIF           185..189
FT                   /note="LXXLL motif 3"
FT                   /evidence="ECO:0000255"
FT   MOTIF           267..271
FT                   /note="LXXLL motif 4"
FT                   /evidence="ECO:0000255"
FT   MOTIF           382..386
FT                   /note="LXXLL motif 5"
FT                   /evidence="ECO:0000255"
FT   MOTIF           441..447
FT                   /note="CTBP-binding; principal site"
FT                   /evidence="ECO:0000250|UniProtKB:P48552"
FT   MOTIF           501..505
FT                   /note="LXXLL motif 6"
FT                   /evidence="ECO:0000255"
FT   MOTIF           566..570
FT                   /note="CTBP-binding"
FT                   /evidence="ECO:0000250|UniProtKB:P48552"
FT   MOTIF           714..718
FT                   /note="LXXLL motif 7"
FT                   /evidence="ECO:0000255"
FT   MOTIF           820..824
FT                   /note="LXXLL motif 8"
FT                   /evidence="ECO:0000255"
FT   MOTIF           937..941
FT                   /note="LXXLL motif 9"
FT                   /evidence="ECO:0000255"
FT   MOTIF           947..951
FT                   /note="CTBP-binding"
FT                   /evidence="ECO:0000250|UniProtKB:P48552"
FT   COMPBIAS        48..68
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        520..559
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        672..687
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        723..744
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        831..845
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        950..970
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   MOD_RES         104
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000269|PubMed:15846843"
FT   MOD_RES         111
FT                   /note="N6-acetyllysine; alternate"
FT                   /evidence="ECO:0000269|PubMed:15879431"
FT   MOD_RES         158
FT                   /note="N6-acetyllysine"
FT                   /evidence="ECO:0000269|PubMed:15879431"
FT   MOD_RES         207
FT                   /note="Phosphothreonine"
FT                   /evidence="ECO:0000269|PubMed:15846843"
FT   MOD_RES         218
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:P48552"
FT   MOD_RES         287
FT                   /note="N6-acetyllysine"
FT                   /evidence="ECO:0000269|PubMed:15879431"
FT   MOD_RES         311
FT                   /note="N6-acetyllysine"
FT                   /evidence="ECO:0000269|PubMed:15879431"
FT   MOD_RES         358
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000269|PubMed:15846843"
FT   MOD_RES         380
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000269|PubMed:15846843"
FT   MOD_RES         447
FT                   /note="N6-acetyllysine"
FT                   /evidence="ECO:0000250|UniProtKB:P48552"
FT   MOD_RES         482
FT                   /note="N6-acetyllysine"
FT                   /evidence="ECO:0000269|PubMed:15879431"
FT   MOD_RES         488
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000269|PubMed:15846843"
FT   MOD_RES         519
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000269|PubMed:15846843"
FT   MOD_RES         529
FT                   /note="N6-acetyllysine"
FT                   /evidence="ECO:0000269|PubMed:15879431"
FT   MOD_RES         531
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000269|PubMed:15846843"
FT   MOD_RES         543
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000269|PubMed:15846843"
FT   MOD_RES         565
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:P48552"
FT   MOD_RES         607
FT                   /note="N6-acetyllysine"
FT                   /evidence="ECO:0000269|PubMed:15879431"
FT   MOD_RES         672
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000269|PubMed:15846843"
FT   MOD_RES         808
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:P48552"
FT   MOD_RES         932
FT                   /note="N6-acetyllysine; alternate"
FT                   /evidence="ECO:0000269|PubMed:15879431"
FT   MOD_RES         1003
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000269|PubMed:15846843"
FT   CROSSLNK        111
FT                   /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT                   G-Cter in SUMO2); alternate"
FT                   /evidence="ECO:0000250|UniProtKB:P48552"
FT   CROSSLNK        170
FT                   /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT                   G-Cter in SUMO2)"
FT                   /evidence="ECO:0000250|UniProtKB:P48552"
FT   CROSSLNK        195
FT                   /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT                   G-Cter in SUMO2)"
FT                   /evidence="ECO:0000250|UniProtKB:P48552"
FT   CROSSLNK        198
FT                   /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT                   G-Cter in SUMO2)"
FT                   /evidence="ECO:0000250|UniProtKB:P48552"
FT   CROSSLNK        374
FT                   /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT                   G-Cter in SUMO2)"
FT                   /evidence="ECO:0000250|UniProtKB:P48552"
FT   CROSSLNK        509
FT                   /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT                   G-Cter in SUMO2)"
FT                   /evidence="ECO:0000250|UniProtKB:P48552"
FT   CROSSLNK        757
FT                   /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT                   G-Cter in SUMO2)"
FT                   /evidence="ECO:0000250|UniProtKB:P48552"
FT   CROSSLNK        803
FT                   /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT                   G-Cter in SUMO2)"
FT                   /evidence="ECO:0000250|UniProtKB:P48552"
FT   CROSSLNK        851
FT                   /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT                   G-Cter in SUMO2)"
FT                   /evidence="ECO:0000250|UniProtKB:P48552"
FT   CROSSLNK        902
FT                   /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT                   G-Cter in SUMO2)"
FT                   /evidence="ECO:0000250|UniProtKB:P48552"
FT   CROSSLNK        932
FT                   /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT                   G-Cter in SUMO2); alternate"
FT                   /evidence="ECO:0000250|UniProtKB:P48552"
FT   CROSSLNK        1108
FT                   /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT                   G-Cter in SUMO2)"
FT                   /evidence="ECO:0000250|UniProtKB:P48552"
FT   CROSSLNK        1118
FT                   /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT                   G-Cter in SUMO2)"
FT                   /evidence="ECO:0000250|UniProtKB:P48552"
FT   CROSSLNK        1157
FT                   /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT                   G-Cter in SUMO2)"
FT                   /evidence="ECO:0000250|UniProtKB:P48552"
FT   MUTAGEN         1067
FT                   /note="N->G: Reduces binding to RAR, RXR and RAR/RXR."
FT                   /evidence="ECO:0000269|PubMed:12549917"
FT   MUTAGEN         1068
FT                   /note="P->A: Abolishes binding to RAR, RXR and RAR/RXR."
FT                   /evidence="ECO:0000269|PubMed:12549917"
FT   MUTAGEN         1073
FT                   /note="M->I: Reduces binding to RAR, RXR and RAR/RXR."
FT                   /evidence="ECO:0000269|PubMed:12549917"
FT   MUTAGEN         1073
FT                   /note="M->K: Abolishes binding to RAR, RXR and RAR/RXR."
FT                   /evidence="ECO:0000269|PubMed:12549917"
FT   MUTAGEN         1073
FT                   /note="M->L: Reduces binding to RAR, RXR and RAR/RXR."
FT                   /evidence="ECO:0000269|PubMed:12549917"
FT   CONFLICT        106
FT                   /note="V -> N (in Ref. 4; AA sequence)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        107
FT                   /note="N -> NN (in Ref. 5; AA sequence)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        119..120
FT                   /note="MV -> IL (in Ref. 1; AAC69611)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        190
FT                   /note="K -> R (in Ref. 1; AAC69611)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        197
FT                   /note="Q -> E (in Ref. 1; AAC69611)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        200
FT                   /note="G -> D (in Ref. 1; AAC69611)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        522
FT                   /note="D -> V (in Ref. 1; AAC69611)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        596
FT                   /note="A -> V (in Ref. 1; AAC69611)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        617
FT                   /note="S -> N (in Ref. 1; AAC69611)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        629
FT                   /note="S -> K (in Ref. 4; AA sequence)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        674
FT                   /note="L -> Q (in Ref. 1; AAC69611)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        818
FT                   /note="G -> F (in Ref. 1; AAC69611)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        855
FT                   /note="M -> I (in Ref. 2; BAE33634)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        886
FT                   /note="S -> R (in Ref. 1; AAC69611)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        1049
FT                   /note="A -> T (in Ref. 1; AAC69611)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   1161 AA;  126337 MW;  56ABD0C2A5AAC0A1 CRC64;
     MTHGEELGSD VHQDSIVLTY LEGLLMHQAA GGSGTAINKK SAGHKEEDQN FNLSGSAFPS
     CQSNGPTVST QTYQGSGMLH LKKARLLQSS EDWNAAKRKR LSDSIVNLNV KKEALLAGMV
     DSVPKGKQDS TLLASLLQSF SSRLQTVALS QQIRQSLKEQ GYALSHESLK VEKDLRCYGV
     ASSHLKTLLK KSKTKDQKSG PTLPDVTPNL IRDSFVESSH PAVGQSGTKV MSEPLSCAAR
     LQAVASMVEK RASPAASPKP SVACSQLALL LSSEAHLQQY SREHALKTQN AHQVASERLA
     AMARLQENGQ KDVGSSQLSK GVSGHLNGQA RALPASKLVA NKNNAATFQS PMGVVPSSPK
     NTSYKNSLER NNLKQAANNS LLLHLLKSQT IPTPMNGHSQ NERASSFESS TPTTIDEYSD
     NNPSFTDDSS GDESSYSNCV PIDLSCKHRI EKPEAERPVS LENLTQSLLN TWDPKIPGVD
     IKEDQDTSTN SKLNSHQKVT LLQLLLGHKS EETVERNASP QDIHSDGTKF SPQNYTRTSV
     IESPSTNRTT PVSTPPLYTA SQAESPINLS QHSLVIKWNS PPYACSTPAS KLTNTAPSHL
     MDLTKGKESQ AEKPAPSEGA QNSATFSASK LLQNLAQCGL QSSGPGEEQR PCKQLLSGNP
     DKPLGLIDRL NSPLLSNKTN AAEESKAFSS QPAGPEPGLP GCEIENLLER RTVLQLLLGN
     SSKGKNEKKE KTPARDEAPQ EHSERAANEQ ILMVKIKSEP CDDFQTHNTN LPLNHDAKSA
     PFLGVTPAIH RSTAALPVSE DFKSEPASPQ DFSFSKNGLL SRLLRQNQES YPADEQDKSH
     RNSELPTLES KNICMVPKKR KLYTEPLENP FKKMKNTAVD TANHHSGPEV LYGSLLHQEE
     LKFSRNELDY KYPAGHSSAS DGDHRSWARE SKSFNVLKQL LLSENCVRDL SPHRSDSVPD
     TKKKGHKNNA PGSKPEFGIS SLNGLMYSSP QPGSCVTDHR TFSYPGMVKT PLSPPFPEHL
     GCVGSRPEPG LLNGCSVPGE KGPIKWVIAD MDKNEYEKDS PRLTKTNPIL YYMLQKGGGN
     SVTTQETQDK DIWREPASAE SLSQVTVKEE LLPAAETKAS FFNLRSPYNS HMGNNASRPH
     STNGEVYGLL GNALTIKKES E
 
 
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