NRP1_ORYSJ
ID NRP1_ORYSJ Reviewed; 259 AA.
AC Q7X7C9; A0A0P0WB53;
DT 16-OCT-2013, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2003, sequence version 1.
DT 03-AUG-2022, entry version 103.
DE RecName: Full=NAP1-related protein 1;
DE AltName: Full=Protein SET homolog 1;
GN OrderedLocusNames=Os04g0459700, LOC_Os04g38620;
GN ORFNames=OSJNBa0036B21.26, OSJNBa0072F16.3;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12447439; DOI=10.1038/nature01183;
RA Feng Q., Zhang Y., Hao P., Wang S., Fu G., Huang Y., Li Y., Zhu J., Liu Y.,
RA Hu X., Jia P., Zhang Y., Zhao Q., Ying K., Yu S., Tang Y., Weng Q.,
RA Zhang L., Lu Y., Mu J., Lu Y., Zhang L.S., Yu Z., Fan D., Liu X., Lu T.,
RA Li C., Wu Y., Sun T., Lei H., Li T., Hu H., Guan J., Wu M., Zhang R.,
RA Zhou B., Chen Z., Chen L., Jin Z., Wang R., Yin H., Cai Z., Ren S., Lv G.,
RA Gu W., Zhu G., Tu Y., Jia J., Zhang Y., Chen J., Kang H., Chen X., Shao C.,
RA Sun Y., Hu Q., Zhang X., Zhang W., Wang L., Ding C., Sheng H., Gu J.,
RA Chen S., Ni L., Zhu F., Chen W., Lan L., Lai Y., Cheng Z., Gu M., Jiang J.,
RA Li J., Hong G., Xue Y., Han B.;
RT "Sequence and analysis of rice chromosome 4.";
RL Nature 420:316-320(2002).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
CC -!- FUNCTION: Acts as histone H2A/H2B chaperone in nucleosome assembly.
CC {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}. Cytoplasm {ECO:0000250}.
CC -!- DOMAIN: The acidic domain is probably involved in the interaction with
CC histones.
CC -!- SIMILARITY: Belongs to the nucleosome assembly protein (NAP) family.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AK102874; Type=Frameshift; Evidence={ECO:0000305};
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DR EMBL; AL606460; CAD40978.1; -; Genomic_DNA.
DR EMBL; AL606636; CAD40908.1; -; Genomic_DNA.
DR EMBL; AP008210; BAF14900.1; -; Genomic_DNA.
DR EMBL; AP014960; BAS89535.1; -; Genomic_DNA.
DR EMBL; AK102874; -; NOT_ANNOTATED_CDS; mRNA.
DR RefSeq; XP_015633828.1; XM_015778342.1.
DR AlphaFoldDB; Q7X7C9; -.
DR SMR; Q7X7C9; -.
DR STRING; 4530.OS04T0459700-02; -.
DR PaxDb; Q7X7C9; -.
DR PRIDE; Q7X7C9; -.
DR EnsemblPlants; Os04t0459700-02; Os04t0459700-02; Os04g0459700.
DR GeneID; 4336046; -.
DR Gramene; Os04t0459700-02; Os04t0459700-02; Os04g0459700.
DR KEGG; osa:4336046; -.
DR eggNOG; KOG1508; Eukaryota.
DR InParanoid; Q7X7C9; -.
DR OMA; RKPFFDK; -.
DR OrthoDB; 1191764at2759; -.
DR Proteomes; UP000000763; Chromosome 4.
DR Proteomes; UP000059680; Chromosome 4.
DR ExpressionAtlas; Q7X7C9; baseline and differential.
DR Genevisible; Q7X7C9; OS.
DR GO; GO:0000785; C:chromatin; IBA:GO_Central.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003682; F:chromatin binding; IBA:GO_Central.
DR GO; GO:0042393; F:histone binding; IBA:GO_Central.
DR GO; GO:0000724; P:double-strand break repair via homologous recombination; IEA:UniProt.
DR GO; GO:0006334; P:nucleosome assembly; IEA:InterPro.
DR InterPro; IPR037231; NAP-like_sf.
DR InterPro; IPR002164; NAP_family.
DR PANTHER; PTHR11875; PTHR11875; 1.
DR Pfam; PF00956; NAP; 1.
DR SUPFAM; SSF143113; SSF143113; 1.
PE 2: Evidence at transcript level;
KW Chaperone; Coiled coil; Cytoplasm; Nucleus; Reference proteome.
FT CHAIN 1..259
FT /note="NAP1-related protein 1"
FT /id="PRO_0000423705"
FT REGION 1..20
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 228..259
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 21..62
FT /evidence="ECO:0000255"
FT CONFLICT 215
FT /note="P -> L (in Ref. 5; AK102874)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 259 AA; 29998 MW; 8BAD5977F433581E CRC64;
MAAAEQKGKK PRTDGAEAEP VDAALLQSIE KLQEIQDEIE KVNEEACDKV LELEQKYNEV
RRPVYVRRNK IIKQIPDFWL TAFLSHPMLG ELLTEDDQKI FKHLESIDVD DSEDIKSGYS
ITLTFSPNPY FEDTKLTKTY SFSDDEAVKV KATSIRWKKG MDIANDRAYT KKGDKRILID
ESFFTWFNSE KNRSFAHGAM DEVADVIKED LWPNPLKYFN NEFEEELELL DDDDEVSDDD
DEEEDDEDQG EGEEDGEEN
