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NRPB1_ARATH
ID   NRPB1_ARATH             Reviewed;        1839 AA.
AC   P18616; P31635; Q56Z04; Q9SZS8;
DT   01-NOV-1990, integrated into UniProtKB/Swiss-Prot.
DT   08-FEB-2011, sequence version 3.
DT   03-AUG-2022, entry version 187.
DE   RecName: Full=DNA-directed RNA polymerase II subunit RPB1 {ECO:0000303|PubMed:19110459, ECO:0000303|PubMed:2103447};
DE            Short=DNA polymerase II subunit B1 {ECO:0000303|PubMed:19110459, ECO:0000303|PubMed:2103447};
DE            EC=2.7.7.6 {ECO:0000269|PubMed:19110459};
DE   AltName: Full=DNA-directed RNA polymerase II largest subunit {ECO:0000303|PubMed:16497658};
DE   AltName: Full=DNA-directed RNA polymerase II subunit 1 {ECO:0000303|PubMed:2103447};
GN   Name=NRPB1 {ECO:0000303|PubMed:19110459};
GN   Synonyms=RPB1 {ECO:0000303|PubMed:2103447},
GN   RPB205 {ECO:0000303|PubMed:2259344}, RPII {ECO:0000303|PubMed:16497658,
GN   ECO:0000303|PubMed:2103447};
GN   OrderedLocusNames=At4g35800 {ECO:0000312|Araport:AT4G35800};
GN   ORFNames=F4B14.70 {ECO:0000312|EMBL:CAA21466.2};
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=2259344; DOI=10.1007/bf00315798;
RA   Nawrath C., Schell J., Koncz C.;
RT   "Homologous domains of the largest subunit of eucaryotic RNA polymerase II
RT   are conserved in plants.";
RL   Mol. Gen. Genet. 223:65-75(1990).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=2103447; DOI=10.1007/bf00036908;
RA   Dietrich M.A., Prenger J.P., Guilfoyle T.J.;
RT   "Analysis of the genes encoding the largest subunit of RNA polymerase II in
RT   Arabidopsis and soybean.";
RL   Plant Mol. Biol. 15:207-223(1990).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=10617198; DOI=10.1038/47134;
RA   Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T.,
RA   Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B.,
RA   Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M.,
RA   de Simone V., Obermaier B., Mache R., Mueller M., Kreis M., Delseny M.,
RA   Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D.,
RA   Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J.,
RA   Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B.,
RA   Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J.,
RA   Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R.,
RA   Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M.,
RA   Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P.,
RA   Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S.,
RA   Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C.,
RA   Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J.,
RA   Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S.,
RA   Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A.,
RA   Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M.,
RA   Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M.,
RA   Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D.,
RA   Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E.,
RA   Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S.,
RA   Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R.,
RA   Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M.,
RA   Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E.,
RA   Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P.,
RA   Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K.,
RA   Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K.,
RA   de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K.,
RA   Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M.,
RA   Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G.,
RA   Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K.,
RA   Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K.,
RA   Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W.,
RA   Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H.,
RA   Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B.,
RA   Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J.,
RA   Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K.,
RA   O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N.,
RA   Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A.,
RA   Martienssen R., McCombie W.R.;
RT   "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.";
RL   Nature 402:769-777(1999).
RN   [4]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [5]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 1743-1839.
RC   STRAIN=cv. Columbia;
RA   Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA   Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA   Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA   Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA   Shinozaki K.;
RT   "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL   Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases.
RN   [6]
RP   INTERACTION WITH CYP59.
RX   PubMed=16497658; DOI=10.1261/rna.2226106;
RA   Gullerova M., Barta A., Lorkovic Z.J.;
RT   "AtCyp59 is a multidomain cyclophilin from Arabidopsis thaliana that
RT   interacts with SR proteins and the C-terminal domain of the RNA polymerase
RT   II.";
RL   RNA 12:631-643(2006).
RN   [7]
RP   INTERACTION WITH PRP40A; PRP40B AND PRP40C.
RX   PubMed=19467629; DOI=10.1016/j.abb.2009.01.004;
RA   Kang C.H., Feng Y., Vikram M., Jeong I.S., Lee J.R., Bahk J.D., Yun D.J.,
RA   Lee S.Y., Koiwa H.;
RT   "Arabidopsis thaliana PRP40s are RNA polymerase II C-terminal domain-
RT   associating proteins.";
RL   Arch. Biochem. Biophys. 484:30-38(2009).
RN   [8]
RP   FUNCTION, CATALYTIC ACTIVITY, IDENTIFICATION BY MASS SPECTROMETRY, SUBUNIT,
RP   AND NOMENCLATURE.
RX   PubMed=19110459; DOI=10.1016/j.molcel.2008.12.015;
RA   Ream T.S., Haag J.R., Wierzbicki A.T., Nicora C.D., Norbeck A.D., Zhu J.K.,
RA   Hagen G., Guilfoyle T.J., Pasa-Tolic L., Pikaard C.S.;
RT   "Subunit compositions of the RNA-silencing enzymes Pol IV and Pol V reveal
RT   their origins as specialized forms of RNA polymerase II.";
RL   Mol. Cell 33:192-203(2009).
RN   [9]
RP   INTERACTION WITH RDM1, AND SUBCELLULAR LOCATION.
RX   PubMed=20410883; DOI=10.1038/nature09025;
RA   Gao Z., Liu H.L., Daxinger L., Pontes O., He X., Qian W., Lin H., Xie M.,
RA   Lorkovic Z.J., Zhang S., Miki D., Zhan X., Pontier D., Lagrange T., Jin H.,
RA   Matzke A.J., Matzke M., Pikaard C.S., Zhu J.K.;
RT   "An RNA polymerase II- and AGO4-associated protein acts in RNA-directed DNA
RT   methylation.";
RL   Nature 465:106-109(2010).
RN   [10]
RP   PHOSPHORYLATION, INTERACTION WITH ATX1, AND SUBUNIT.
RC   STRAIN=cv. Wassilewskija;
RX   PubMed=21266657; DOI=10.1105/tpc.110.080150;
RA   Ding Y., Avramova Z., Fromm M.;
RT   "Two distinct roles of ARABIDOPSIS HOMOLOG OF TRITHORAX1 (ATX1) at
RT   promoters and within transcribed regions of ATX1-regulated genes.";
RL   Plant Cell 23:350-363(2011).
RN   [11]
RP   INTERACTION WITH MEE12/CCG1 AND ME14/CBP1.
RX   PubMed=26462908; DOI=10.1105/tpc.15.00370;
RA   Li H.J., Zhu S.S., Zhang M.X., Wang T., Liang L., Xue Y., Shi D.Q., Liu J.,
RA   Yang W.C.;
RT   "Arabidopsis CBP1 is a novel regulator of transcription initiation in
RT   central cell-mediated pollen tube guidance.";
RL   Plant Cell 27:2880-2893(2015).
CC   -!- FUNCTION: DNA-dependent RNA polymerase catalyzes the transcription of
CC       DNA into RNA using the four ribonucleoside triphosphates as substrates.
CC       Largest and catalytic component of RNA polymerase II which synthesizes
CC       mRNA precursors and many functional non-coding RNAs. Forms the
CC       polymerase active center together with the second largest subunit. Pol
CC       II is the central component of the basal RNA polymerase II
CC       transcription machinery. It is composed of mobile elements that move
CC       relative to each other. NRPB1 is part of the core element with the
CC       central large cleft, the clamp element that moves to open and close the
CC       cleft and the jaws that are thought to grab the incoming DNA template.
CC       At the start of transcription, a single-stranded DNA template strand of
CC       the promoter is positioned within the central active site cleft of Pol
CC       II. A bridging helix emanates from NRPB1 and crosses the cleft near the
CC       catalytic site and is thought to promote translocation of Pol II by
CC       acting as a ratchet that moves the RNA-DNA hybrid through the active
CC       site by switching from straight to bent conformations at each step of
CC       nucleotide addition. During transcription elongation, Pol II moves on
CC       the template as the transcript elongates. Elongation is influenced by
CC       the phosphorylation status of the C-terminal domain (CTD) of Pol II
CC       largest subunit (NRPB1), which serves as a platform for assembly of
CC       factors that regulate transcription initiation, elongation, termination
CC       and mRNA processing. {ECO:0000269|PubMed:19110459}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC         RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC         COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC         EC=2.7.7.6; Evidence={ECO:0000269|PubMed:19110459};
CC   -!- SUBUNIT: Component of the RNA polymerase II (Pol II) complex consisting
CC       of at least 12 subunits. Interacts with RDM1. Interacts (via CTD) with
CC       PRP40A, PRP40B, PRP40C and CYP59 (PubMed:16497658, PubMed:19110459,
CC       PubMed:19467629, PubMed:20410883). Interacts with MEE12/CCG1 and
CC       MEE14/CBP1 (PubMed:26462908). Binds (via CTD) to ATX1, especially when
CC       phosphorylated on 'Ser-5' of the heptapeptide repeat (PubMed:21266657).
CC       {ECO:0000269|PubMed:16497658, ECO:0000269|PubMed:19110459,
CC       ECO:0000269|PubMed:19467629, ECO:0000269|PubMed:20410883,
CC       ECO:0000269|PubMed:21266657, ECO:0000269|PubMed:26462908}.
CC   -!- INTERACTION:
CC       P18616; Q6Q151: CYP59; NbExp=3; IntAct=EBI-1540537, EBI-1625989;
CC       P18616; Q9LUJ3: RDM1; NbExp=2; IntAct=EBI-1540537, EBI-15850569;
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:20410883}. Note=Peri-
CC       nucleolar. {ECO:0000269|PubMed:20410883}.
CC   -!- DOMAIN: The C-terminal domain (CTD) serves as a platform for assembly
CC       of factors that regulate transcription initiation, elongation,
CC       termination and mRNA processing. {ECO:0000305}.
CC   -!- PTM: The tandem 7 residues repeats in the C-terminal domain (CTD) can
CC       be highly phosphorylated. The phosphorylation activates Pol II.
CC       Phosphorylation occurs mainly at residues 'Ser-2' and 'Ser-5' of the
CC       heptapeptide repeat. The phosphorylation state is believed to result
CC       from the balanced action of site-specific CTD kinases and phosphatase,
CC       and a 'CTD code' that specifies the position of Pol II within the
CC       transcription cycle has been proposed. ATX1 seems to regulate
CC       phosphorylation statment (PubMed:21266657). 'Ser-2' and 'Ser-5'
CC       phosphorylation are repressed by flavopiridol (Flap) and seliciclib
CC       (Selic), inhibitors of CDK7 and CDK9 (PubMed:21266657).
CC       {ECO:0000269|PubMed:21266657}.
CC   -!- MISCELLANEOUS: The binding of ribonucleoside triphosphate to the RNA
CC       polymerase II transcribing complex probably involves a two-step
CC       mechanism. The initial binding seems to occur at the entry (E) site and
CC       involves a magnesium ion temporarily coordinated by three conserved
CC       aspartate residues of the two largest RNA Pol II subunits. The
CC       ribonucleoside triphosphate is transferred by a rotation to the
CC       nucleotide addition (A) site for pairing with the template DNA. The
CC       catalytic A site involves three conserved aspartate residues of the RNA
CC       Pol II largest subunit which permanently coordinate a second magnesium
CC       ion. {ECO:0000305|PubMed:19110459}.
CC   -!- SIMILARITY: Belongs to the RNA polymerase beta' chain family.
CC       {ECO:0000305}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=CAA36735.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR   EMBL; X52954; CAA37130.1; -; Genomic_DNA.
DR   EMBL; X52494; CAA36735.1; ALT_SEQ; Genomic_DNA.
DR   EMBL; AL031986; CAA21466.2; -; Genomic_DNA.
DR   EMBL; AL161588; CAB81489.1; -; Genomic_DNA.
DR   EMBL; CP002687; AEE86573.1; -; Genomic_DNA.
DR   EMBL; CP002687; ANM67520.1; -; Genomic_DNA.
DR   EMBL; AK221166; BAD95215.1; -; mRNA.
DR   PIR; G85422; G85422.
DR   PIR; T04690; JDMU1.
DR   RefSeq; NP_001329346.1; NM_001342374.1.
DR   RefSeq; NP_195305.2; NM_119746.4.
DR   AlphaFoldDB; P18616; -.
DR   SMR; P18616; -.
DR   BioGRID; 15016; 35.
DR   DIP; DIP-40008N; -.
DR   IntAct; P18616; 4.
DR   MINT; P18616; -.
DR   STRING; 3702.AT4G35800.1; -.
DR   iPTMnet; P18616; -.
DR   PaxDb; P18616; -.
DR   PRIDE; P18616; -.
DR   ProteomicsDB; 249447; -.
DR   EnsemblPlants; AT4G35800.1; AT4G35800.1; AT4G35800.
DR   EnsemblPlants; AT4G35800.2; AT4G35800.2; AT4G35800.
DR   GeneID; 829734; -.
DR   Gramene; AT4G35800.1; AT4G35800.1; AT4G35800.
DR   Gramene; AT4G35800.2; AT4G35800.2; AT4G35800.
DR   KEGG; ath:AT4G35800; -.
DR   Araport; AT4G35800; -.
DR   TAIR; locus:2125319; AT4G35800.
DR   eggNOG; KOG0260; Eukaryota.
DR   HOGENOM; CLU_000487_1_1_1; -.
DR   InParanoid; P18616; -.
DR   OMA; KSAPCMG; -.
DR   OrthoDB; 591636at2759; -.
DR   PhylomeDB; P18616; -.
DR   PRO; PR:P18616; -.
DR   Proteomes; UP000006548; Chromosome 4.
DR   ExpressionAtlas; P18616; baseline and differential.
DR   Genevisible; P18616; AT.
DR   GO; GO:0000325; C:plant-type vacuole; HDA:TAIR.
DR   GO; GO:0009506; C:plasmodesma; HDA:TAIR.
DR   GO; GO:0005665; C:RNA polymerase II, core complex; IDA:UniProtKB.
DR   GO; GO:0003677; F:DNA binding; ISS:TAIR.
DR   GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; ISS:TAIR.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0006366; P:transcription by RNA polymerase II; IEA:InterPro.
DR   Gene3D; 1.10.132.30; -; 1.
DR   Gene3D; 1.10.274.100; -; 1.
DR   Gene3D; 3.30.1360.140; -; 1.
DR   Gene3D; 4.10.860.120; -; 2.
DR   InterPro; IPR045867; DNA-dir_RpoC_beta_prime.
DR   InterPro; IPR000722; RNA_pol_asu.
DR   InterPro; IPR000684; RNA_pol_II_repeat_euk.
DR   InterPro; IPR006592; RNA_pol_N.
DR   InterPro; IPR007080; RNA_pol_Rpb1_1.
DR   InterPro; IPR007066; RNA_pol_Rpb1_3.
DR   InterPro; IPR042102; RNA_pol_Rpb1_3_sf.
DR   InterPro; IPR007083; RNA_pol_Rpb1_4.
DR   InterPro; IPR007081; RNA_pol_Rpb1_5.
DR   InterPro; IPR007075; RNA_pol_Rpb1_6.
DR   InterPro; IPR007073; RNA_pol_Rpb1_7.
DR   InterPro; IPR038593; RNA_pol_Rpb1_7_sf.
DR   InterPro; IPR044893; RNA_pol_Rpb1_clamp_domain.
DR   InterPro; IPR038120; Rpb1_funnel_sf.
DR   PANTHER; PTHR19376; PTHR19376; 1.
DR   Pfam; PF04997; RNA_pol_Rpb1_1; 1.
DR   Pfam; PF00623; RNA_pol_Rpb1_2; 1.
DR   Pfam; PF04983; RNA_pol_Rpb1_3; 1.
DR   Pfam; PF05000; RNA_pol_Rpb1_4; 1.
DR   Pfam; PF04998; RNA_pol_Rpb1_5; 1.
DR   Pfam; PF04992; RNA_pol_Rpb1_6; 1.
DR   Pfam; PF04990; RNA_pol_Rpb1_7; 1.
DR   Pfam; PF05001; RNA_pol_Rpb1_R; 15.
DR   SMART; SM00663; RPOLA_N; 1.
DR   PROSITE; PS00115; RNA_POL_II_REPEAT; 23.
PE   1: Evidence at protein level;
KW   DNA-binding; DNA-directed RNA polymerase; Magnesium; Metal-binding;
KW   Nucleotidyltransferase; Nucleus; Phosphoprotein; Reference proteome;
KW   Repeat; Transcription; Transferase; Zinc.
FT   CHAIN           1..1839
FT                   /note="DNA-directed RNA polymerase II subunit RPB1"
FT                   /id="PRO_0000073933"
FT   REPEAT          1544..1550
FT                   /note="1"
FT   REPEAT          1551..1557
FT                   /note="2"
FT   REPEAT          1558..1564
FT                   /note="3"
FT   REPEAT          1565..1571
FT                   /note="4"
FT   REPEAT          1572..1578
FT                   /note="5"
FT   REPEAT          1579..1585
FT                   /note="6"
FT   REPEAT          1586..1592
FT                   /note="7"
FT   REPEAT          1593..1599
FT                   /note="8"
FT   REPEAT          1600..1606
FT                   /note="9"
FT   REPEAT          1607..1613
FT                   /note="10"
FT   REPEAT          1614..1620
FT                   /note="11"
FT   REPEAT          1621..1627
FT                   /note="12"
FT   REPEAT          1628..1634
FT                   /note="13"
FT   REPEAT          1635..1641
FT                   /note="14"
FT   REPEAT          1642..1648
FT                   /note="15"
FT   REPEAT          1649..1655
FT                   /note="16"
FT   REPEAT          1656..1662
FT                   /note="17"
FT   REPEAT          1663..1669
FT                   /note="18"
FT   REPEAT          1670..1676
FT                   /note="19"
FT   REPEAT          1677..1683
FT                   /note="20"
FT   REPEAT          1684..1690
FT                   /note="21"
FT   REPEAT          1691..1697
FT                   /note="22"
FT   REPEAT          1698..1704
FT                   /note="23"
FT   REPEAT          1705..1711
FT                   /note="24"
FT   REPEAT          1712..1718
FT                   /note="25"
FT   REPEAT          1719..1725
FT                   /note="26"
FT   REPEAT          1726..1732
FT                   /note="27"
FT   REPEAT          1733..1738
FT                   /note="28; approximate"
FT   REPEAT          1739..1745
FT                   /note="29"
FT   REPEAT          1752..1758
FT                   /note="30"
FT   REPEAT          1759..1765
FT                   /note="31"
FT   REPEAT          1766..1772
FT                   /note="32"
FT   REPEAT          1773..1779
FT                   /note="33"
FT   REPEAT          1780..1786
FT                   /note="34"
FT   REPEAT          1794..1799
FT                   /note="35; approximate"
FT   REPEAT          1800..1806
FT                   /note="36"
FT   REPEAT          1807..1813
FT                   /note="37"
FT   DNA_BIND        326..397
FT                   /evidence="ECO:0000250"
FT   REGION          152..174
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          785..795
FT                   /note="Alpha-amanitin binding"
FT   REGION          829..841
FT                   /note="Bridging helix"
FT   REGION          1538..1839
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1544..1813
FT                   /note="C-terminal domain (CTD); 37 X 7 AA tandem
FT                   approximate repeats of Y-[GNS]-P-[QST]-[LNS]-[APT]-
FT                   [AGKNRSTY]"
FT   COMPBIAS        152..166
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1538..1753
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1759..1816
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1817..1839
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   BINDING         66
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000250|UniProtKB:P04050"
FT   BINDING         69
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000250|UniProtKB:P04050"
FT   BINDING         76
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000250|UniProtKB:P04050"
FT   BINDING         79
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000250|UniProtKB:P04050"
FT   BINDING         106
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="2"
FT                   /evidence="ECO:0000250|UniProtKB:P04050"
FT   BINDING         109
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="2"
FT                   /evidence="ECO:0000250|UniProtKB:P04050"
FT   BINDING         147
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="2"
FT                   /evidence="ECO:0000250|UniProtKB:P04050"
FT   BINDING         172
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="2"
FT                   /evidence="ECO:0000250|UniProtKB:P04050"
FT   BINDING         495
FT                   /ligand="Mg(2+)"
FT                   /ligand_id="ChEBI:CHEBI:18420"
FT                   /ligand_note="catalytic"
FT                   /evidence="ECO:0000250|UniProtKB:P04050"
FT   BINDING         497
FT                   /ligand="Mg(2+)"
FT                   /ligand_id="ChEBI:CHEBI:18420"
FT                   /ligand_note="catalytic"
FT                   /evidence="ECO:0000250|UniProtKB:P04050"
FT   BINDING         499
FT                   /ligand="Mg(2+)"
FT                   /ligand_id="ChEBI:CHEBI:18420"
FT                   /ligand_note="catalytic"
FT                   /evidence="ECO:0000250|UniProtKB:P04050"
FT   CONFLICT        117..122
FT                   /note="EEHKFK -> VCRSLFR (in Ref. 1; CAA37130)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        192..196
FT                   /note="IQRKK -> NSKEE (in Ref. 2; CAA36735)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        297
FT                   /note="A -> R (in Ref. 2; CAA36735)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        302
FT                   /note="E -> R (in Ref. 2; CAA36735)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        400..416
FT                   /note="KELVDYGPHPPPGKTGA -> VRLVFISFSET (in Ref. 1;
FT                   CAA37130)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        427
FT                   /note="L -> S (in Ref. 1; CAA37130)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        738
FT                   /note="N -> D (in Ref. 1; CAA37130)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        1061
FT                   /note="A -> R (in Ref. 1; CAA37130)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        1088
FT                   /note="A -> P (in Ref. 2; CAA36735)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        1719
FT                   /note="Y -> YSPTSPSY (in Ref. 1; CAA37130)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   1839 AA;  204626 MW;  7B8488DBB5180B40 CRC64;
     MDTRFPFSPA EVSKVRVVQF GILSPDEIRQ MSVIHVEHSE TTEKGKPKVG GLSDTRLGTI
     DRKVKCETCM ANMAECPGHF GYLELAKPMY HVGFMKTVLS IMRCVCFNCS KILADEEEHK
     FKQAMKIKNP KNRLKKILDA CKNKTKCDGG DDIDDVQSHS TDEPVKKSRG GCGAQQPKLT
     IEGMKMIAEY KIQRKKNDEP DQLPEPAERK QTLGADRVLS VLKRISDADC QLLGFNPKFA
     RPDWMILEVL PIPPPPVRPS VMMDATSRSE DDLTHQLAMI IRHNENLKRQ EKNGAPAHII
     SEFTQLLQFH IATYFDNELP GQPRATQKSG RPIKSICSRL KAKEGRIRGN LMGKRVDFSA
     RTVITPDPTI NIDELGVPWS IALNLTYPET VTPYNIERLK ELVDYGPHPP PGKTGAKYII
     RDDGQRLDLR YLKKSSDQHL ELGYKVERHL QDGDFVLFNR QPSLHKMSIM GHRIRIMPYS
     TFRLNLSVTS PYNADFDGDE MNMHVPQSFE TRAEVLELMM VPKCIVSPQA NRPVMGIVQD
     TLLGCRKITK RDTFIEKDVF MNTLMWWEDF DGKVPAPAIL KPRPLWTGKQ VFNLIIPKQI
     NLLRYSAWHA DTETGFITPG DTQVRIERGE LLAGTLCKKT LGTSNGSLVH VIWEEVGPDA
     ARKFLGHTQW LVNYWLLQNG FTIGIGDTIA DSSTMEKINE TISNAKTAVK DLIRQFQGKE
     LDPEPGRTMR DTFENRVNQV LNKARDDAGS SAQKSLAETN NLKAMVTAGS KGSFINISQM
     TACVGQQNVE GKRIPFGFDG RTLPHFTKDD YGPESRGFVE NSYLRGLTPQ EFFFHAMGGR
     EGLIDTAVKT SETGYIQRRL VKAMEDIMVK YDGTVRNSLG DVIQFLYGED GMDAVWIESQ
     KLDSLKMKKS EFDRTFKYEI DDENWNPTYL SDEHLEDLKG IRELRDVFDA EYSKLETDRF
     QLGTEIATNG DSTWPLPVNI KRHIWNAQKT FKIDLRKISD MHPVEIVDAV DKLQERLLVV
     PGDDALSVEA QKNATLFFNI LLRSTLASKR VLEEYKLSRE AFEWVIGEIE SRFLQSLVAP
     GEMIGCVAAQ SIGEPATQMT LNTFHYAGVS AKNVTLGVPR LREIINVAKR IKTPSLSVYL
     TPEASKSKEG AKTVQCALEY TTLRSVTQAT EVWYDPDPMS TIIEEDFEFV RSYYEMPDED
     VSPDKISPWL LRIELNREMM VDKKLSMADI AEKINLEFDD DLTCIFNDDN AQKLILRIRI
     MNDEGPKGEL QDESAEDDVF LKKIESNMLT EMALRGIPDI NKVFIKQVRK SRFDEEGGFK
     TSEEWMLDTE GVNLLAVMCH EDVDPKRTTS NHLIEIIEVL GIEAVRRALL DELRVVISFD
     GSYVNYRHLA ILCDTMTYRG HLMAITRHGI NRNDTGPLMR CSFEETVDIL LDAAAYAETD
     CLRGVTENIM LGQLAPIGTG DCELYLNDEM LKNAIELQLP SYMDGLEFGM TPARSPVSGT
     PYHEGMMSPN YLLSPNMRLS PMSDAQFSPY VGGMAFSPSS SPGYSPSSPG YSPTSPGYSP
     TSPGYSPTSP GYSPTSPTYS PSSPGYSPTS PAYSPTSPSY SPTSPSYSPT SPSYSPTSPS
     YSPTSPSYSP TSPSYSPTSP AYSPTSPAYS PTSPAYSPTS PSYSPTSPSY SPTSPSYSPT
     SPSYSPTSPS YSPTSPAYSP TSPGYSPTSP SYSPTSPSYG PTSPSYNPQS AKYSPSIAYS
     PSNARLSPAS PYSPTSPNYS PTSPSYSPTS PSYSPSSPTY SPSSPYSSGA SPDYSPSAGY
     SPTLPGYSPS STGQYTPHEG DKKDKTGKKD ASKDDKGNP
 
 
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