NRPS2_ZYMTI
ID NRPS2_ZYMTI Reviewed; 4476 AA.
AC F9X9V1;
DT 07-OCT-2020, integrated into UniProtKB/Swiss-Prot.
DT 19-OCT-2011, sequence version 1.
DT 23-FEB-2022, entry version 58.
DE RecName: Full=Nonribosomal peptide synthetase 2 {ECO:0000303|PubMed:28818040};
DE EC=6.3.2.- {ECO:0000305|PubMed:28818040};
DE AltName: Full=Ferrichrome A-like siderophore biosynthesis protein NRPS2 {ECO:0000303|PubMed:28818040};
GN Name=NRPS2 {ECO:0000303|PubMed:28818040}; ORFNames=MYCGRDRAFT_92222;
OS Zymoseptoria tritici (strain CBS 115943 / IPO323) (Speckled leaf blotch
OS fungus) (Septoria tritici).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes;
OC Dothideomycetidae; Mycosphaerellales; Mycosphaerellaceae; Zymoseptoria.
OX NCBI_TaxID=336722;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CBS 115943 / IPO323;
RX PubMed=21695235; DOI=10.1371/journal.pgen.1002070;
RA Goodwin S.B., Ben M'barek S., Dhillon B., Wittenberg A.H.J., Crane C.F.,
RA Hane J.K., Foster A.J., Van der Lee T.A.J., Grimwood J., Aerts A.,
RA Antoniw J., Bailey A., Bluhm B., Bowler J., Bristow J., van der Burgt A.,
RA Canto-Canche B., Churchill A.C.L., Conde-Ferraez L., Cools H.J.,
RA Coutinho P.M., Csukai M., Dehal P., De Wit P., Donzelli B.,
RA van de Geest H.C., van Ham R.C.H.J., Hammond-Kosack K.E., Henrissat B.,
RA Kilian A., Kobayashi A.K., Koopmann E., Kourmpetis Y., Kuzniar A.,
RA Lindquist E., Lombard V., Maliepaard C., Martins N., Mehrabi R.,
RA Nap J.P.H., Ponomarenko A., Rudd J.J., Salamov A., Schmutz J.,
RA Schouten H.J., Shapiro H., Stergiopoulos I., Torriani S.F.F., Tu H.,
RA de Vries R.P., Waalwijk C., Ware S.B., Wiebenga A., Zwiers L.-H.,
RA Oliver R.P., Grigoriev I.V., Kema G.H.J.;
RT "Finished genome of the fungal wheat pathogen Mycosphaerella graminicola
RT reveals dispensome structure, chromosome plasticity, and stealth
RT pathogenesis.";
RL PLoS Genet. 7:E1002070-E1002070(2011).
RN [2]
RP FUNCTION, AND PATHWAY.
RX PubMed=28818040; DOI=10.1186/s12864-017-3969-y;
RA Cairns T., Meyer V.;
RT "In silico prediction and characterization of secondary metabolite
RT biosynthetic gene clusters in the wheat pathogen Zymoseptoria tritici.";
RL BMC Genomics 18:631-631(2017).
CC -!- FUNCTION: Nonribosomal peptide synthetase; part of the gene cluster 14
CC that mediates the biosynthesis of a ferrichrome A-like siderophore
CC which may contribute to organismal virulence (Probable). The first step
CC of siderophore biosynthesis is performed by the HMG-CoA synthase (HMGS)
CC MYCGRDRAFT_54740 which catalyzes the generation of HMG-CoA and CoA
CC using acetoacetyl-CoA and acetyl-CoA as substrates (By similarity). The
CC enoyl-CoA isomerase/hydratase MYCGRDRAFT_76805 then catalyzes the
CC conversion of HMG-CoA to methylglutaconyl-CoA (By similarity). The
CC acyltransferase MYCGRDRAFT_85486 then fuses methylglutaconyl-CoA with
CC hydroxyornithine to yield methylglutaconyl hydroxyornithine (By
CC similarity). Methylglutaconyl hydroxyornithine is then available for
CC use by the nonribosomal peptide synthetase NRPS2 to generate the
CC ferrichrome A-like siderophore (By similarity).
CC {ECO:0000250|UniProtKB:Q4P3F1, ECO:0000250|UniProtKB:Q4PEM9,
CC ECO:0000250|UniProtKB:Q4PEN0, ECO:0000250|UniProtKB:Q4PEN1,
CC ECO:0000305|PubMed:28818040}.
CC -!- PATHWAY: Siderophore biosynthesis. {ECO:0000305|PubMed:28818040}.
CC -!- DOMAIN: NRP synthetases are composed of discrete domains (adenylation
CC (A), thiolation (T) or peptidyl carrier protein (PCP) and condensation
CC (C) domains) which when grouped together are referred to as a single
CC module. Each module is responsible for the recognition (via the A
CC domain) and incorporation of a single amino acid into the growing
CC peptide product. Thus, an NRP synthetase is generally composed of one
CC or more modules and can terminate in a thioesterase domain (TE) that
CC releases the newly synthesized peptide from the enzyme. Occasionally,
CC epimerase (E) domains (responsible for L- to D- amino acid conversion)
CC are present within the NRP synthetase. NRPS2 has the following
CC architecture: A-T-C-T-C-A-T-C-T-C-T-C (Probable). The lack of
CC corresponding A domains in the 3 modules suggests that A domains have
CC to be used iteratively to incorporate the six amino acids in the
CC siderophore (By similarity). {ECO:0000250|UniProtKB:Q4PEM9,
CC ECO:0000305|PubMed:28818040}.
CC -!- SIMILARITY: Belongs to the NRP synthetase family. {ECO:0000305}.
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DR EMBL; CM001199; EGP88586.1; -; Genomic_DNA.
DR RefSeq; XP_003853610.1; XM_003853562.1.
DR SMR; F9X9V1; -.
DR STRING; 1047171.Mycgr3P40534; -.
DR GeneID; 13400882; -.
DR KEGG; ztr:MYCGRDRAFT_92222; -.
DR eggNOG; KOG1178; Eukaryota.
DR InParanoid; F9X9V1; -.
DR Proteomes; UP000008062; Chromosome 4.
DR GO; GO:0016874; F:ligase activity; IEA:UniProtKB-KW.
DR GO; GO:0031177; F:phosphopantetheine binding; IEA:InterPro.
DR Gene3D; 1.10.1200.10; -; 4.
DR Gene3D; 3.30.300.30; -; 3.
DR Gene3D; 3.30.559.10; -; 5.
DR Gene3D; 3.40.50.12780; -; 2.
DR InterPro; IPR036736; ACP-like_sf.
DR InterPro; IPR045851; AMP-bd_C_sf.
DR InterPro; IPR020845; AMP-binding_CS.
DR InterPro; IPR000873; AMP-dep_Synth/Lig.
DR InterPro; IPR042099; ANL_N_sf.
DR InterPro; IPR023213; CAT-like_dom_sf.
DR InterPro; IPR001242; Condensatn.
DR InterPro; IPR020806; PKS_PP-bd.
DR InterPro; IPR009081; PP-bd_ACP.
DR InterPro; IPR006162; Ppantetheine_attach_site.
DR Pfam; PF00501; AMP-binding; 2.
DR Pfam; PF00668; Condensation; 5.
DR Pfam; PF00550; PP-binding; 5.
DR SMART; SM00823; PKS_PP; 4.
DR SUPFAM; SSF47336; SSF47336; 5.
DR PROSITE; PS00455; AMP_BINDING; 2.
DR PROSITE; PS50075; CARRIER; 5.
DR PROSITE; PS00012; PHOSPHOPANTETHEINE; 5.
PE 3: Inferred from homology;
KW Ligase; Phosphopantetheine; Phosphoprotein; Reference proteome; Repeat;
KW Virulence.
FT CHAIN 1..4476
FT /note="Nonribosomal peptide synthetase 2"
FT /id="PRO_0000451093"
FT DOMAIN 714..790
FT /note="Carrier 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00258"
FT DOMAIN 1524..1598
FT /note="Carrier 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00258"
FT DOMAIN 2724..2800
FT /note="Carrier 3"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00258"
FT DOMAIN 3307..3381
FT /note="Carrier 4"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00258"
FT DOMAIN 3889..3967
FT /note="Carrier 5"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00258"
FT REGION 156..587
FT /note="Adenylation 1"
FT REGION 826..1261
FT /note="Condensation 1"
FT REGION 1645..2106
FT /note="Condensation 2"
FT REGION 2151..2585
FT /note="Adenylation 2"
FT REGION 2867..3232
FT /note="Condensation 3"
FT REGION 3418..3854
FT /note="Condensation 4"
FT REGION 3858..3888
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 4030..4300
FT /note="Condensation 5"
FT COMPBIAS 3858..3878
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOD_RES 749
FT /note="O-(pantetheine 4'-phosphoryl)serine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00258"
FT MOD_RES 1558
FT /note="O-(pantetheine 4'-phosphoryl)serine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00258"
FT MOD_RES 2761
FT /note="O-(pantetheine 4'-phosphoryl)serine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00258"
FT MOD_RES 3341
FT /note="O-(pantetheine 4'-phosphoryl)serine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00258"
FT MOD_RES 3928
FT /note="O-(pantetheine 4'-phosphoryl)serine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00258"
SQ SEQUENCE 4476 AA; 492986 MW; 78AA1F699D1F86EA CRC64;
MLLHELLPLN VLTSATCRPN VCSRKNYGCN VTGHLVTRAE YLSPSAGWNA GAESEAVVED
VERVEDVPSG FLLDLRFVAR IVPTNTGYQI VLDVDGHLIP EAALDTLLEL LCSQISGNDH
NAAQKSILNY PHHSRPVPFP QEPDIERHPA LLHGCFERRV EQFPDRMAID YLNLDQTRVQ
YTYREVNAIA ERIAARIASG DQQNEGPVAI VMGPSPEMYI AYIAVLKAGR PFCPIPVDAP
VERQMVILED LECRIVITRN HDIGLEIFGG NDQTKALSDD VQIVNASDFL DPKLLTEEPE
IQHSIRTCLS SADEDDLAYI LYTSGTTGKP KGVQISHLSA ACLVAADSAI VPIASSPNAR
PTRWFQFCAP TFDPSIMEIF VTLSGGGTLC CAERQLTLND IYSVLAQMDV DVMLATPSLA
TLLDPLQLKG LWAMGEALNV KVTETFAALN PAASSDWSPD DGPRGLYNGY GPTEAAMNCS
ALLHVLANNR GGIIGSPLPS VSLIVVDEQD PLRPLPYGCA GELLISGPQV SSRGYLNRPE
ETAKAFLPVT PWGRAYRTGD RARVVWDSAG NPSVEFLGRI SSDQVKLSGR RVELGEIDAA
VLAVPEVREA LTVIYKPPGS EGKGSEKPLT AVSLVDGAEW DAVKEKIEAT VQKNLLPFMR
PYRLFMMEQI PRSLAGKLDR RALTTVLHEK INAEQTMQSS EEVADDEPQD PLPPHLAEVE
GKLLDILSDI LQYRPSPTAS LVSDAGLDSL RGMQLLSRVR AQYLVEDLSL QDLLSGQSVR
RLLLSKDDRL ASAADDKTKA ILRDFSHRHL NSASRSAGLP AEDIEKVVPA TAGQSGAIAS
LMRSSQGTRK TYINHSCYHL EPGRVDIDRL IAAIEDVLIA REAYRTTFVP IDDAIAPFAH
CILTPEAAAK HGLCRVVRRC GSHSEEHWLQ EAENAISIVA NTLYRIQIVD DHLLIISLFH
GIFDGASLEL LMVDIERQYH GLPKEHRSDI SFAAEHDLKL QSKKTDDFWL QETANFHAET
IPVLIGSKSQ PWTEQEAETL VVKHTTSLKY KDLETRSREI GASPLAIWQT AWAMLLSSYS
ERQASDVMLG SVVSNRFDTE SAVCHGPTFT VLPCRVQVPN DPDSITSVGQ AVSQVARAGT
RALGHAYPSL GLITTPEGKL PYDSLLAFQH FQVEESSKSE RESLWNRISW PAMRHDFGAM
LEVWPCDQAI PRSQWNTECP MIVKLTFKTD LFAEVTAERI LSQLSSIVMA ILERPQQTAR
ECLGSIPRAL LSVQNVDAKR VKFDLGNVPS TNPSDNHSTA SNTDNTLACT SRFVVTSEPP
HRLVPFHGVG ELALNGPRIG EAREHASSTA GRSVWSEDLQ QHIILTGDIV RMVDHGIEML
GRSDNFVKVN GIGIHLSRIN AAFSDAHEDP EDIETLLMTR PGMENSALVS FASVRNESAD
APLIAEDKRA WSVRESILIA ARQKLDDYMV PSFVVMLNSI PRTASNDVDR KALEDVFTKL
DLDRFATSNE FQLSKAQPEF KVRTPTDDRV IGILSEITGV DAASITDNMS LARLGIHSMA
AIRLAWRLKK EAQISVAVVD LLTCSSVGQL LQIVSSGAAR GARDEEQRKT AEYLDRIEWQ
LFDKFAEQLN PQAGSSDFTL HCLRPATTMQ EALVIETLRD NRSYWSHRMF RLPPGVDFDR
LRAAWEAVAR DNEILRTSFM VAAEIAPDAT SWLREADLPT AILQAIVKST EIRWTVAEWS
SASQSLATVA NDIAQHARNE CSPIASSKLT PPWSVTILQD SSTDEKTMIL HMHHALHDAA
SMESIFEDLV KQYQDGSQKS ERAQFGEAMR YGIFATREQT ERAQSKVQEL YGPLVEQFGA
ITTTKCPDLT GSRQPQQRKI LRTTASIRPC DDLKLWSALQ ASVAKYDLKS PAQIISTAFG
SVLAEYLESK YVVIGETLDQ RIQDTKLQSV IGPLIVTVPI AVRIDLSTAD FFSSLSRETN
AAMQDLYHMQ PAALRKTLGI SSDQPLYPAL VVFHPRMGDD ETKDDAKNTT SSKFFDEMED
VVGLSVEHSL ALNIFEGEPG NGYTFELSGD SSVISVPQLE LLLSQVKSQL SAMLSHPNVP
IIELNNTLPR SVLSVNDATY KAMNEIKKLS RKSQWSGIAP PTVNPVAWIE YHARHHPRWT
AVEQIADMDD PYAVRRWTYS FLLFKVSRIL EALSKRGIQR GSIVAVHLGR TLESFATIIA
LFRGGYIYLP LDEELPSERT ATLATDAGAA AFITTQELLT ELKSDLGDSS LVGIDVMLLE
TLLTNPNPQA DATVSLPKYR SHKHSTDDGY ILFTSGSTGK PKGVRVTNFN LCNFIESLGK
RILDHSPQTG RLGGIGKYLN IASRSFDPHL THMFMAWRFG LAATIGPRMM MLGNLEQIIN
ENSITHFGTV PSVLQQAQLT PARVPSVVLV TVGGEKVSNS VLDTWAGDSN GPSAGPLVLN
AYGPTECTIG CSSNVVDYDS NARNIGWAHD SATAIVFAQE VFGHIGKQVI AKRGQIGELC
IAGNMVSLGY LSRPEAQAEA FATTTLLRSE DNGKPLRFYR TGDLVRMMAD GSMEFLGRSD
QQAKVNGQRL ELGEVEHFLQ KTAEAMKLKL EFAAAVIDHP ELPRPRLFTF IAAARDTDDP
SSKNILELTT IAGSRSLSDE LSEACAKSLP AFMVPELVWV NHIPHLKASG KVDTKTLNLL
IKSMSLSQLH GDEQEAESND TLQQSLTKDE ETVLLAIEYT LGSKTKHPSA SRSIYELGID
SISAIQLSAH LKQSGFRLST ADVLSHATIR HLAQKGRTSS PADDHTLLHN AAQRIKQFQK
DYESEVKSSF GDSGVQVEQI LPTMPLQGAL LARSIAQLQE DEDESFEKIK YVTQFRYSLS
DSTDLERFVS AVKKVLQKEQ MLRTCFRQIS TGQMAQIVLS RCLGGPFVTF VNSPWATWCQ
SSSPDMIARQ LVEDIGNLPP VRVHVFDGSS PEILLSIHHA LFDGDAISQL RDRIQEQYQG
AVKNKSRQDA IQQLLVTFEA VDPDAAIAFW HRNLQDVAPC LVGDHSNASE RQTKNLARSM
RRLSLPLEKL RSAVQNCSVS LNALFQTVFA VLLSELLPER SDVVFGNVVS LRPLLASTIP
DIDQVIAPCL NTLPQRIQLS EAGQNQGSLR SLAQSVREIF SETMQHAFVP LDQILKWAQS
NEALFDAVIS VNMHNHQVGA TGDKTSSQPA FLTLEETMSA TNVPFAADVN IHSFGSYLGY
VEVELSSSTQ NVQVSELVGR FEEICNIFVE RPETQVFGLL PLLPKTVVAP VSARNDGVHE
PDDTPWSCTE MIIRDVVCEL LAVPPEKMRK RTSFYRLGLD SILVLRMVKL LHDRIGVKLS
PLAVLRARCV AGVADAVEKR GSIARYPHKE LQSGRSDDTG DLLRLAKNLG VYPAASRCYL
ATPMQQGMLS AGLAHFVEAH NQSKPYVYRH TFEIKDRSKF RLEAFHHAWK QSVEQVEILR
TTFHFTEDDS QPWLGIVRPF ADVFREAQVV QSMEDAVRTA ASIDASTCLA CCTLVVPKDL
TERITAVFTM HHAIYDGVSL SRLWKIFTKS YHAFINGSDA SLAPLVPFSR AAEQIAAEQA
PAVAYWSRQL EEYSYAPVMK NHDKGETIQS TRYRAVVSLP SGQHEEVKSR CRDIGSTVNA
ALMVAWSKVL AKAVLKQSDV VFGQVLDGRL LALDVEGQGL NADSVVGPLL NTVPIRMLLS
SDCSNQQMLQ RAQHLSEDAQ QHQVASLRVV QNTWRSTTSC AVSSELFQSL LVFNSEGGGK
AEDSDNCIWR PSRLTSGDGQ DGFTEYPLVC NVSASRTGLD LRVSTAPSHF DALSADRLAS
NLKTELLEQL TSLDAPSVPA TLPLQKQPSA NAQLSREESR STATDESKEE NVDLCTVVLD
AFEAVRGRAK MTDTVDAHTN LFRAGLDSIL AIRLSSKLSR TAIPLTVPQI MQSKTVASMV
ARLRTVQMRK QELQNTGCRS GPNVDARLVS DAEQQEAIRR LGWTESDVES VLPCLAGQEH
HIESWTFAGH RFFEAPWIFK LKSDLLVSQV RRAWDELRRH HAILRSSFVA VTKSCVGGPK
AMQVTQKAHC VNTRADGTFS LVESNEASTL DALLVQHLQQ TNDQTSSLLS PPARLTLLRT
ADGHSAMVMR LHHAMYDAWS IRGILRDFDV LLADGELSGS TDLVEALHAI LAERKPNDEQ
VFWSQTLKEA QKTILPGDAD ETETPGPLGP QHLVRMPSVV SAAAIRNLER LSQSKASASL
SPALLLAFAQ TLAEYTGTTS PTFGFYHASR SLGPTDLTNM AVPTMTLTPL SVVVGHRAQY
RSTAVAGVES IQNHLSKLGQ FGQASVHDIM RSIGHAQPFF NAYINLLYRD TSDLGGDKSA
PSSRSLATLE RLTPSSNTYF TETRASEQCA PPVRELDTSY IAPERLFVDV VVDRENGGIS
LGLRCDRSLY GVEQVRTFAR RFVRNLSRLE EVLSGV