NS1_INCCA
ID NS1_INCCA Reviewed; 246 AA.
AC P06944; Q68BV4;
DT 01-JAN-1988, integrated into UniProtKB/Swiss-Prot.
DT 21-FEB-2006, sequence version 2.
DT 23-FEB-2022, entry version 68.
DE RecName: Full=Non-structural protein 1 {ECO:0000255|HAMAP-Rule:MF_04066};
DE Short=NS1 {ECO:0000255|HAMAP-Rule:MF_04066};
DE AltName: Full=NS1A {ECO:0000255|HAMAP-Rule:MF_04066};
GN Name=NS {ECO:0000255|HAMAP-Rule:MF_04066};
OS Influenza C virus (strain C/California/1978).
OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina;
OC Insthoviricetes; Articulavirales; Orthomyxoviridae; Gammainfluenzavirus.
OX NCBI_TaxID=203224;
OH NCBI_TaxID=9606; Homo sapiens (Human).
OH NCBI_TaxID=9823; Sus scrofa (Pig).
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX PubMed=4032535; DOI=10.1128/jvi.56.1.221-226.1985;
RA Nakada S., Graves P.N., Desselberger U., Creager R.S., Krystal M.,
RA Palese P.;
RT "Influenza C virus RNA 7 codes for a nonstructural protein.";
RL J. Virol. 56:221-226(1985).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RX PubMed=15310173; DOI=10.1017/s0950268804002146;
RA Matsuzaki Y., Takao S., Shimada S., Mizuta K., Sugawara K., Takashita E.,
RA Muraki Y., Hongo S., Nishimura H.;
RT "Characterization of antigenically and genetically similar influenza C
RT viruses isolated in Japan during the 1999-2000 season.";
RL Epidemiol. Infect. 132:709-720(2004).
CC -!- FUNCTION: Prevents the establishment of the cellular antiviral state
CC initiated by host DDX58, which normally triggers the antiviral
CC transduction signal that leads to the activation of type I IFN genes by
CC transcription factors IRF3 and IRF7. Participates also in the up-
CC regulation of the splicing of viral mRNAs. {ECO:0000255|HAMAP-
CC Rule:MF_04066}.
CC -!- SUBCELLULAR LOCATION: Host cytoplasm {ECO:0000255|HAMAP-Rule:MF_04066}.
CC Host nucleus {ECO:0000255|HAMAP-Rule:MF_04066}.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=2;
CC Name=NS1;
CC IsoId=P06944-1; Sequence=Displayed;
CC Name=NEP; Synonyms=NS2;
CC IsoId=P33493-1; Sequence=External;
CC -!- SIMILARITY: Belongs to the influenza C viruses NS1 family.
CC {ECO:0000255|HAMAP-Rule:MF_04066}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAA43780.1; Type=Frameshift; Evidence={ECO:0000305};
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DR EMBL; M10087; AAA43780.1; ALT_FRAME; Genomic_RNA.
DR EMBL; AB099625; BAD37133.1; -; Genomic_RNA.
DR PIR; A25320; MNIVC7.
DR GO; GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0039502; P:suppression by virus of host type I interferon-mediated signaling pathway; IEA:UniProtKB-KW.
DR GO; GO:0039540; P:suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway via inhibition of host RIG-I activity; IEA:UniProtKB-KW.
DR HAMAP; MF_04066; INFV_NS1; 1.
DR InterPro; IPR005187; Flu_C_NS1.
DR InterPro; IPR005188; Flu_C_NS2.
DR InterPro; IPR004208; NS1.
DR Pfam; PF03506; Flu_C_NS1; 1.
DR Pfam; PF03555; Flu_C_NS2; 1.
PE 3: Inferred from homology;
KW Alternative splicing; Host cytoplasm; Host nucleus; Host-virus interaction;
KW Inhibition of host innate immune response by virus;
KW Inhibition of host interferon signaling pathway by virus;
KW Inhibition of host RIG-I by virus; Inhibition of host RLR pathway by virus;
KW Interferon antiviral system evasion; RNA-binding; Viral immunoevasion.
FT CHAIN 1..246
FT /note="Non-structural protein 1"
FT /id="PRO_0000044586"
SQ SEQUENCE 246 AA; 27739 MW; 0C6CD2063F16B4E7 CRC64;
MSDKTVKSTN LMAFVATKML ERQEDLDTCT EMQVEKMKTS TKARLRTESS FAPRTWEDAI
KDGELLFNGT ILQAESTTMT PASVEMKGKK FPIDFVPSNI APIGQNPIYL SPCIPNFDGN
VWEATMYHHR GATLTKTMNC NCFQRTIWCH PNPSRMRLSY AFVLYCRNTK KICGYLIAKQ
VAGIETGIRK CFRCIKSGFV MATDEISLII LQSIKSGAQL DPYWGNETPD IDKTEAYMLS
LREAGP