NSRP1_CAEBR
ID NSRP1_CAEBR Reviewed; 393 AA.
AC A8XXB0;
DT 16-DEC-2008, integrated into UniProtKB/Swiss-Prot.
DT 15-JAN-2008, sequence version 1.
DT 03-AUG-2022, entry version 62.
DE RecName: Full=Nuclear speckle splicing regulatory protein 1 homolog;
DE AltName: Full=Coiled-coil domain-containing protein 55 homolog;
GN Name=ccdc-55 {ECO:0000312|EMBL:CAP37279.1}; ORFNames=CBG20153;
OS Caenorhabditis briggsae.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6238;
RN [1] {ECO:0000312|EMBL:CAP37279.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AF16 {ECO:0000312|EMBL:CAP37279.1};
RX PubMed=14624247; DOI=10.1371/journal.pbio.0000045;
RA Stein L.D., Bao Z., Blasiar D., Blumenthal T., Brent M.R., Chen N.,
RA Chinwalla A., Clarke L., Clee C., Coghlan A., Coulson A., D'Eustachio P.,
RA Fitch D.H.A., Fulton L.A., Fulton R.E., Griffiths-Jones S., Harris T.W.,
RA Hillier L.W., Kamath R., Kuwabara P.E., Mardis E.R., Marra M.A.,
RA Miner T.L., Minx P., Mullikin J.C., Plumb R.W., Rogers J., Schein J.E.,
RA Sohrmann M., Spieth J., Stajich J.E., Wei C., Willey D., Wilson R.K.,
RA Durbin R.M., Waterston R.H.;
RT "The genome sequence of Caenorhabditis briggsae: a platform for comparative
RT genomics.";
RL PLoS Biol. 1:166-192(2003).
CC -!- SIMILARITY: Belongs to the NSRP1 family. {ECO:0000305}.
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DR EMBL; HE601013; CAP37279.1; -; Genomic_DNA.
DR RefSeq; XP_002642530.1; XM_002642484.1.
DR AlphaFoldDB; A8XXB0; -.
DR STRING; 6238.CBG20153; -.
DR PRIDE; A8XXB0; -.
DR EnsemblMetazoa; CBG20153.1; CBG20153.1; WBGene00039208.
DR GeneID; 8584524; -.
DR KEGG; cbr:CBG_20153; -.
DR CTD; 8584524; -.
DR WormBase; CBG20153; CBP19810; WBGene00039208; Cbr-ccdc-55.
DR eggNOG; KOG2117; Eukaryota.
DR HOGENOM; CLU_772145_0_0_1; -.
DR InParanoid; A8XXB0; -.
DR OMA; RDEQRHE; -.
DR OrthoDB; 1276363at2759; -.
DR Proteomes; UP000008549; Chromosome III.
DR GO; GO:0000381; P:regulation of alternative mRNA splicing, via spliceosome; IEA:InterPro.
DR InterPro; IPR042816; Nsrp1.
DR InterPro; IPR018612; NSRP1_N.
DR PANTHER; PTHR31938; PTHR31938; 2.
DR Pfam; PF09745; DUF2040; 1.
PE 3: Inferred from homology;
KW Coiled coil; Reference proteome.
FT CHAIN 1..393
FT /note="Nuclear speckle splicing regulatory protein 1
FT homolog"
FT /id="PRO_0000355615"
FT REGION 1..49
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 187..350
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 76..166
FT /evidence="ECO:0000255"
FT COMPBIAS 10..31
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 195..258
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 298..350
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 393 AA; 45338 MW; 95C22526D15F5574 CRC64;
MSAPPKRFGL IVKQKEEPKR APVRVSSVFG DDDDDEAPAT ATNTSSASVI RIQKAAEREH
QKAEAEDPTI FDYDGNYDEI QAIKNEKKEE ARKADKNKES KYAEAIIKAH ARRQLEQFSR
EERQQIKERE KEAGEFDDKE VFVTGAYRKQ QEEVKKYREQ EAEEAAFNDM TSVQKQKMWE
MGMGRTLLND LARDPTAIKQ RKMEKKNVRK REDSGDEEEQ KEDVKKKEEP KKKSIYDTDS
EDDEKKSKAP EAPKKNFEGE LKAGLNLVTK KATTHAERIR QRNFTPTPPS SDDEAPKPAP
RAVGDHRRST SPRRSRDHAQ RNQREKTKSK SPEPPKAQKT SLKDKLKPKR IDKAARLDGL
KAILAQRNTE KDIEEARQRY FERREQGLVV PPL