NTRI_BOVIN
ID NTRI_BOVIN Reviewed; 345 AA.
AC Q58DA5; Q17QT6;
DT 13-JUN-2006, integrated into UniProtKB/Swiss-Prot.
DT 26-APR-2005, sequence version 1.
DT 03-AUG-2022, entry version 91.
DE RecName: Full=Neurotrimin;
DE Flags: Precursor;
GN Name=NTM; Synonyms=NT;
OS Bos taurus (Bovine).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae;
OC Bovinae; Bos.
OX NCBI_TaxID=9913;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RX PubMed=16305752; DOI=10.1186/1471-2164-6-166;
RA Harhay G.P., Sonstegard T.S., Keele J.W., Heaton M.P., Clawson M.L.,
RA Snelling W.M., Wiedmann R.T., Van Tassell C.P., Smith T.P.L.;
RT "Characterization of 954 bovine full-CDS cDNA sequences.";
RL BMC Genomics 6:166-166(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=Hereford; TISSUE=Thalamus;
RG NIH - Mammalian Gene Collection (MGC) project;
RL Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Neural cell adhesion molecule. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000250}; Lipid-anchor, GPI-
CC anchor {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the immunoglobulin superfamily. IgLON family.
CC {ECO:0000305}.
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DR EMBL; BT021692; AAX46539.1; -; mRNA.
DR EMBL; BC118192; AAI18193.1; -; mRNA.
DR RefSeq; NP_001017949.1; NM_001017949.2.
DR AlphaFoldDB; Q58DA5; -.
DR SMR; Q58DA5; -.
DR STRING; 9913.ENSBTAP00000013234; -.
DR PaxDb; Q58DA5; -.
DR Ensembl; ENSBTAT00000013234; ENSBTAP00000013234; ENSBTAG00000010032.
DR GeneID; 534414; -.
DR KEGG; bta:534414; -.
DR CTD; 50863; -.
DR VEuPathDB; HostDB:ENSBTAG00000010032; -.
DR VGNC; VGNC:32302; NTM.
DR eggNOG; KOG3510; Eukaryota.
DR GeneTree; ENSGT00940000158679; -.
DR HOGENOM; CLU_027228_2_2_1; -.
DR InParanoid; Q58DA5; -.
DR OMA; PITKRDF; -.
DR OrthoDB; 583722at2759; -.
DR TreeFam; TF325565; -.
DR Proteomes; UP000009136; Chromosome 29.
DR Bgee; ENSBTAG00000010032; Expressed in retina and 68 other tissues.
DR ExpressionAtlas; Q58DA5; baseline.
DR GO; GO:0031225; C:anchored component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0007155; P:cell adhesion; IEA:UniProtKB-KW.
DR Gene3D; 2.60.40.10; -; 3.
DR InterPro; IPR007110; Ig-like_dom.
DR InterPro; IPR036179; Ig-like_dom_sf.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR013098; Ig_I-set.
DR InterPro; IPR003599; Ig_sub.
DR InterPro; IPR003598; Ig_sub2.
DR Pfam; PF07679; I-set; 1.
DR SMART; SM00409; IG; 3.
DR SMART; SM00408; IGc2; 3.
DR SUPFAM; SSF48726; SSF48726; 3.
DR PROSITE; PS50835; IG_LIKE; 3.
PE 2: Evidence at transcript level;
KW Cell adhesion; Cell membrane; Disulfide bond; Glycoprotein; GPI-anchor;
KW Immunoglobulin domain; Lipoprotein; Membrane; Reference proteome; Repeat;
KW Signal.
FT SIGNAL 1..30
FT /evidence="ECO:0000255"
FT CHAIN 31..321
FT /note="Neurotrimin"
FT /id="PRO_0000239704"
FT PROPEP 322..345
FT /note="Removed in mature form"
FT /evidence="ECO:0000255"
FT /id="PRO_0000239705"
FT DOMAIN 39..126
FT /note="Ig-like C2-type 1"
FT DOMAIN 136..218
FT /note="Ig-like C2-type 2"
FT DOMAIN 222..309
FT /note="Ig-like C2-type 3"
FT LIPID 321
FT /note="GPI-anchor amidated asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 44
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 70
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 152
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 284
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 292
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 305
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 321
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT DISULFID 57..115
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00114"
FT DISULFID 157..201
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00114"
FT DISULFID 243..295
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00114"
SQ SEQUENCE 345 AA; 38000 MW; 47C94D781A70F0F7 CRC64;
MGVCGSLFLP WKCLVVVSLR LLFLVPTGVP VRSGDATFPK AMDNVTVRQG ESATLRCTID
NRVTRVAWLN RSTILYAGND KWCLDPRVVL LSNTQTQYSI EIQNVDVYDE GPYTCSVQTD
NHPKTSRVHL IVQVSPKIVE ISSDISINEG NNISLTCIAT GRPEPTVTWR HISPKAVGFV
SEDEYLEIQG ITREQSGYYE CSASNDVAAP VVRRVKVTVN YPPYISEAKG TGVPVGQKGT
LQCEASAVPS AEFQWYKDDK RLVEGKKGVK VENRPFLSKL IFFNVSEHDY GNYTCVASNK
LGHTNASITL FGPGAVSEVS NGTSSRRAGC LWLLPLLVLH LLLKF