NU146_SCHPO
ID NU146_SCHPO Reviewed; 1325 AA.
AC Q09847;
DT 01-FEB-1996, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-1996, sequence version 1.
DT 03-AUG-2022, entry version 125.
DE RecName: Full=Nucleoporin nup146;
DE AltName: Full=Nuclear pore protein nup146;
GN Name=nup146; ORFNames=SPAC23D3.06c;
OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina;
OC Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae;
OC Schizosaccharomyces.
OX NCBI_TaxID=284812;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=972 / ATCC 24843;
RX PubMed=11859360; DOI=10.1038/nature724;
RA Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A.,
RA Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S.,
RA Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.,
RA Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S.,
RA Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S.,
RA Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D.,
RA Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P.,
RA Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K.,
RA O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M.,
RA Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N.,
RA Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A.,
RA Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R.,
RA Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M.,
RA Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A.,
RA Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A.,
RA Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H.,
RA Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S.,
RA Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C.,
RA Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A.,
RA Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M.,
RA del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S.,
RA Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R.,
RA Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G.,
RA Nurse P.;
RT "The genome sequence of Schizosaccharomyces pombe.";
RL Nature 415:871-880(2002).
RN [2]
RP FUNCTION, AND SUBCELLULAR LOCATION.
RX PubMed=15116432; DOI=10.1002/yea.1115;
RA Chen X.Q., Du X., Liu J., Balasubramanian M.K., Balasundaram D.;
RT "Identification of genes encoding putative nucleoporins and transport
RT factors in the fission yeast Schizosaccharomyces pombe: a deletion
RT analysis.";
RL Yeast 21:495-509(2004).
RN [3]
RP SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].
RX PubMed=16823372; DOI=10.1038/nbt1222;
RA Matsuyama A., Arai R., Yashiroda Y., Shirai A., Kamata A., Sekido S.,
RA Kobayashi Y., Hashimoto A., Hamamoto M., Hiraoka Y., Horinouchi S.,
RA Yoshida M.;
RT "ORFeome cloning and global analysis of protein localization in the fission
RT yeast Schizosaccharomyces pombe.";
RL Nat. Biotechnol. 24:841-847(2006).
RN [4]
RP PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-899; THR-946; SER-1041;
RP SER-1043 AND SER-1044, AND IDENTIFICATION BY MASS SPECTROMETRY.
RX PubMed=18257517; DOI=10.1021/pr7006335;
RA Wilson-Grady J.T., Villen J., Gygi S.P.;
RT "Phosphoproteome analysis of fission yeast.";
RL J. Proteome Res. 7:1088-1097(2008).
CC -!- FUNCTION: Functions as a component of the nuclear pore complex (NPC).
CC NPC components, collectively referred to as nucleoporins (NUPs), can
CC play the role of both NPC structural components and of docking or
CC interaction partners for transiently associated nuclear transport
CC factors. Active directional transport is assured by both, a Phe-Gly
CC (FG) repeat affinity gradient for these transport factors across the
CC NPC and a transport cofactor concentration gradient across the nuclear
CC envelope. {ECO:0000269|PubMed:15116432}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm. Nucleus. Note=Nuclear rim.
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DR EMBL; CU329670; CAA91241.1; -; Genomic_DNA.
DR PIR; S62497; S62497.
DR RefSeq; NP_594543.1; NM_001019972.2.
DR AlphaFoldDB; Q09847; -.
DR SMR; Q09847; -.
DR BioGRID; 278009; 2.
DR IntAct; Q09847; 1.
DR STRING; 4896.SPAC23D3.06c.1; -.
DR iPTMnet; Q09847; -.
DR MaxQB; Q09847; -.
DR PaxDb; Q09847; -.
DR PRIDE; Q09847; -.
DR EnsemblFungi; SPAC23D3.06c.1; SPAC23D3.06c.1:pep; SPAC23D3.06c.
DR GeneID; 2541507; -.
DR KEGG; spo:SPAC23D3.06c; -.
DR PomBase; SPAC23D3.06c; nup146.
DR VEuPathDB; FungiDB:SPAC23D3.06c; -.
DR eggNOG; KOG3630; Eukaryota.
DR HOGENOM; CLU_257817_0_0_1; -.
DR InParanoid; Q09847; -.
DR OMA; GIPGQIE; -.
DR PhylomeDB; Q09847; -.
DR PRO; PR:Q09847; -.
DR Proteomes; UP000002485; Chromosome I.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005635; C:nuclear envelope; HDA:PomBase.
DR GO; GO:0034399; C:nuclear periphery; IDA:PomBase.
DR GO; GO:0005643; C:nuclear pore; IDA:PomBase.
DR GO; GO:0044613; C:nuclear pore central transport channel; ISO:PomBase.
DR GO; GO:0044614; C:nuclear pore cytoplasmic filaments; ISO:PomBase.
DR GO; GO:0005634; C:nucleus; HDA:PomBase.
DR GO; GO:0003714; F:transcription corepressor activity; IBA:GO_Central.
DR GO; GO:0006407; P:rRNA export from nucleus; ISO:PomBase.
DR Gene3D; 2.130.10.10; -; 1.
DR InterPro; IPR039462; Nup159/Nup146_N.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR Pfam; PF16755; NUP214; 1.
PE 1: Evidence at protein level;
KW Cytoplasm; Nucleus; Phosphoprotein; Reference proteome; Transport.
FT CHAIN 1..1325
FT /note="Nucleoporin nup146"
FT /id="PRO_0000116418"
FT REGION 1..20
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 453..474
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 758..951
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 973..994
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 454..474
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 759..779
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 792..860
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 936..950
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOD_RES 899
FT /note="Phosphothreonine"
FT /evidence="ECO:0000269|PubMed:18257517"
FT MOD_RES 946
FT /note="Phosphothreonine"
FT /evidence="ECO:0000269|PubMed:18257517"
FT MOD_RES 1041
FT /note="Phosphoserine"
FT /evidence="ECO:0000269|PubMed:18257517"
FT MOD_RES 1043
FT /note="Phosphoserine"
FT /evidence="ECO:0000269|PubMed:18257517"
FT MOD_RES 1044
FT /note="Phosphoserine"
FT /evidence="ECO:0000269|PubMed:18257517"
SQ SEQUENCE 1325 AA; 145777 MW; EEFD952FB7F0E6BD CRC64;
MNAENTFSIL NTNEPNAGGS QVTESEIEEE DIEFLSFAAL KIGATSSLSN SSLGLPEYSN
LFAINNLKSL FVAGVPNYLI IGSTLDLQKS LIDADENVDA NVLKDSASIR HVSLPDAKFS
MVSFSSNGEF VIAYDFVSFE LSVYETDALL KNSATSIYKA VFPDLVQVLP NPEINNLVIL
RNLKLEVFLL SLSKFQVESP LAKDATCAAW SRRGKQCVIG FNNGTMSQYT PAGEIKLRIP
RPPSLENYFV ECISWIENRE FVVFYSPLTS LSNESDEPPH ESECFVISVG MNGHFNFGKA
GDPTPPFGAV NRRDHHYIAS LHAWKPDLRS LVVVANTASA DLGVLALSME KNQWSILNIV
DETKRASLPY SNKKDSDSSP TALVMDFTAT DRISKPLDPT EAPADCSPLP IVWVFNDEFQ
LVAYRIFYAD AISKSIDYPE MNVIKDKNKD STVRASNNEN IPTPDKQASP FVKNLSSTSS
PFSQSSAFGN FKFGQATSFD KGLSTDASSG AKSNTPVFGQ PSTFGQAPVF GQPSAFGQAP
VFGQPSAFGQ SSFSFGTSNM NQKLDFGTFK SPLSGAATGE AKTNLEKAVT SASGKASFTG
FAPSQSTTSG LNFDSIPKDN EAASIFGSSQ VSTKNTSGFQ FSNNTLLADN VDEDIESDHD
TKIEELANSD VEPSTEQNIG GDVSWGASTF QSKPQPSFSF GLTLDDKSNT PGKNFSIFGK
TAETQVEQKK PENNVLTKPF SFAPSDKSMF AANIPSAGEG LDQQKTSKAL PSTGITKLSE
NDNEKAEESN ETKGFNTTIA KQNDKSSKSE GKASVANMSA LNKSTNNETS DSKPSLKSPL
FNFSADAPTF TFNKPSETPP FSFNKPLVEK ESKQDVSDTS DRSPFSFKAF GIDSKKSPTP
EPTEMAESNI SEESEGWKLI EQPNVESEIE DQDEESSDLN GKRRSTPPKI HEVGVNKMLD
VVPKEKRDLN SFFPKQPLVV QSTDKNKKEP QESLEDEILS AEGFSEVEAA NKISRFEPFS
SPKLKLATSD NAPEKYVFEE SESSDLEEGP VPLRNLESLA DLPEAESNEK LPMVNTFERL
YLQFKNELDL VWQNINIIAE YIEGQTSTPS AVSEQATMAM LSQNTEELED LLDTVTSFSA
FCSDYSKQID YLEACLVRIN AKRIQVTRLL KALTNPAFEK QMELRQLGPE ALRRQKELRL
KMEKVLKSLS TLEQQAVDAR MSDTRRFKKP TLGSIEVAYS RIATLLGQRL KQLYKLEKDI
KRMATKKKMI TKKSMSSDMM TQFRALGISQ SSTKQVSAHY LREFERQDAF RNGVFKRLTS
LKKAD