NU159_CHATD
ID NU159_CHATD Reviewed; 1481 AA.
AC G0SBS8; G0ZGT8;
DT 24-JUN-2015, integrated into UniProtKB/Swiss-Prot.
DT 19-OCT-2011, sequence version 1.
DT 25-MAY-2022, entry version 41.
DE RecName: Full=Nucleoporin NUP159 {ECO:0000303|PubMed:21784248};
DE AltName: Full=Nuclear pore protein NUP159;
GN Name=NUP159; ORFNames=CTHT_0054650;
OS Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes;
OC Sordariomycetidae; Sordariales; Chaetomiaceae; Chaetomium.
OX NCBI_TaxID=759272;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 1495 / CBS 144.50 / IMI 039719;
RX PubMed=21784248; DOI=10.1016/j.cell.2011.06.039;
RA Amlacher S., Sarges P., Flemming D., van Noort V., Kunze R., Devos D.P.,
RA Arumugam M., Bork P., Hurt E.;
RT "Insight into structure and assembly of the nuclear pore complex by
RT utilizing the genome of a eukaryotic thermophile.";
RL Cell 146:277-289(2011).
CC -!- FUNCTION: Functions as a component of the nuclear pore complex (NPC).
CC NPC components, collectively referred to as nucleoporins (NUPs), can
CC play the role of both NPC structural components and of docking or
CC interaction partners for transiently associated nuclear transport
CC factors. Active directional transport is assured by both, a Phe-Gly
CC (FG) repeat affinity gradient for these transport factors across the
CC NPC and a transport cofactor concentration gradient across the nuclear
CC envelope (GSP1 and GSP2 GTPases associated predominantly with GTP in
CC the nucleus, with GDP in the cytoplasm). NUP159 plays an important role
CC in several nuclear export pathways including poly(A)+ RNA, pre-
CC ribosome, and protein export. {ECO:0000250|UniProtKB:P40477}.
CC -!- SUBUNIT: Component of the nuclear pore complex (NPC). NPC constitutes
CC the exclusive means of nucleocytoplasmic transport. NPCs allow the
CC passive diffusion of ions and small molecules and the active, nuclear
CC transport receptor-mediated bidirectional transport of macromolecules
CC such as proteins, RNAs, ribonucleoparticles (RNPs), and ribosomal
CC subunits across the nuclear envelope. Due to its 8-fold rotational
CC symmetry, all subunits are present with 8 copies or multiples thereof.
CC {ECO:0000250|UniProtKB:P40477, ECO:0000305|PubMed:21784248}.
CC -!- SUBCELLULAR LOCATION: Nucleus, nuclear pore complex
CC {ECO:0000250|UniProtKB:P40477}. Nucleus membrane
CC {ECO:0000250|UniProtKB:P40477}; Peripheral membrane protein
CC {ECO:0000250|UniProtKB:P40477}; Cytoplasmic side
CC {ECO:0000250|UniProtKB:P40477}.
CC -!- DOMAIN: Contains FG repeats. FG repeats are interaction sites for
CC karyopherins (importins, exportins) and form probably an affinity
CC gradient, guiding the transport proteins unidirectionally with their
CC cargo through the NPC. FG repeat regions are highly flexible and lack
CC ordered secondary structure. The overall conservation of FG repeats
CC regarding exact sequence, spacing, and repeat unit length is limited.
CC FG repeat types and their physico-chemical environment change across
CC the NPC from the nucleoplasmic to the cytoplasmic side: PXFG repeats
CC are especially abundant in NUPs on the cytoplasmic side.
CC {ECO:0000250|UniProtKB:P40477}.
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DR EMBL; GL988045; EGS18854.1; -; Genomic_DNA.
DR EMBL; JF276278; AEL00676.1; -; Genomic_DNA.
DR RefSeq; XP_006695799.1; XM_006695736.1.
DR PDB; 5CWW; X-ray; 2.20 A; C=1449-1480.
DR PDBsum; 5CWW; -.
DR AlphaFoldDB; G0SBS8; -.
DR SMR; G0SBS8; -.
DR DIP; DIP-61838N; -.
DR IntAct; G0SBS8; 3.
DR STRING; 759272.G0SBS8; -.
DR TCDB; 1.I.1.1.2; the nuclear pore complex (npc) family.
DR EnsemblFungi; EGS18854; EGS18854; CTHT_0054650.
DR GeneID; 18259503; -.
DR KEGG; cthr:CTHT_0054650; -.
DR eggNOG; KOG3630; Eukaryota.
DR HOGENOM; CLU_003852_0_0_1; -.
DR OrthoDB; 655910at2759; -.
DR Proteomes; UP000008066; Unassembled WGS sequence.
DR GO; GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
DR GO; GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.
DR GO; GO:0015031; P:protein transport; IEA:UniProtKB-KW.
DR Gene3D; 2.130.10.10; -; 1.
DR InterPro; IPR026054; Nucleoporin.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR PANTHER; PTHR23193; PTHR23193; 2.
PE 1: Evidence at protein level;
KW 3D-structure; Coiled coil; Membrane; mRNA transport; Nuclear pore complex;
KW Nucleus; Protein transport; Reference proteome; Repeat; Translocation;
KW Transport; WD repeat.
FT CHAIN 1..1481
FT /note="Nucleoporin NUP159"
FT /id="PRO_0000433173"
FT REPEAT 106..146
FT /note="WD 1"
FT /evidence="ECO:0000255"
FT REPEAT 201..241
FT /note="WD 2"
FT /evidence="ECO:0000255"
FT REPEAT 483..486
FT /note="PXFG 1"
FT REPEAT 493..496
FT /note="PXFG 2"
FT REPEAT 519..522
FT /note="PXFG 3"
FT REPEAT 524..527
FT /note="PXFG 4"
FT REPEAT 532..535
FT /note="PXFG 5"
FT REPEAT 559..562
FT /note="PXFG 6"
FT REPEAT 644..647
FT /note="PXFG 7"
FT REGION 607..647
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 662..994
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1385..1404
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1414..1443
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 903..957
FT /evidence="ECO:0000255"
FT COILED 1233..1318
FT /evidence="ECO:0000255"
FT MOTIF 1345..1352
FT /note="Bipartite nuclear localization signal"
FT /evidence="ECO:0000255"
FT MOTIF 1435..1442
FT /note="Bipartite nuclear localization signal"
FT /evidence="ECO:0000255"
FT COMPBIAS 662..676
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 720..768
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 780..795
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 809..825
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 906..956
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 977..994
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT HELIX 1452..1470
FT /evidence="ECO:0007829|PDB:5CWW"
SQ SEQUENCE 1481 AA; 156196 MW; 3A06B1A947ABEF99 CRC64;
MAFSFGNAGG GGGGVTQGKD LEVIQTEGLG FLALAGDAKV QLTSKWSPPP APTASLLSIA
SRKGLVAAAG PDAVHVATTE SVRKAFLAEK NGDSEVRPFN PEAKLPLPLR ISQLAFTADE
QYLVLSAETG GGLRAYDVNS LTQGNTQSAF ELATNGETLR QLAPNPMPES AAFCAIVTTN
GNLYMANLAE RTLVSGPNGP TLRSQVSCAA WSTKGKQLVA GMADGSIYQM TPDGTEKAHI
PKPPNLGDYH VSSVVWLENN VFLTIHNPTN STNPDDKTVY HVITRQQSSG SPPNFTFQKL
NDPVEPFVAD KTPHHTVLRL KDFPPNLQDL LLVSSTAVET IGLLTRSKTP LATDKPADAI
TNVFTTTELA DDSRRAQLPM SEDMMETYPI GVALDLSSKE KVYKPIPTDE EIEYSPGPLP
GLWVLNNEGV LASWWVVYNE SIRAGTTYSG IGGSSEVIPA SPAPALASST APVPAFASPV
SKPTFGSPSP ATPAFGGPSA LGTKASPWAT AGGAASSTPT FGQPSFGKPA APAFGQASFP
GLGQKVSPWA TGSTTSAAPA FGQSGFASAG TAPGKVFGSS FTAPSSGGFA SFATKSGFAS
LSAPSGGSSI FSSKPGAPLT SAAPEVSMDT DTAFPPPSTK TDKPAFGSSP FVLGSTFKAD
PTAAHDIEKP KEGESKSLFD TGFGLSLEDA AKQPASAAES KDEEMRSTTP PLPPPTETKP
KSIFESTTPT TTPAPQKFEF KTTTPSGFST LLGSTKPVAS SMPNIFATPK PTSAEKPKSI
FDTLKPKEES KENLLKASEP PLPPDTTSKA VFQPGSSSSE SAESSPGAAA KAAFKVGNDE
TPKPQKELAP KPEAVPLPPD FVKAKPKTEA KETKAEEPAV SPNLPVKPLA KKAEPIPAVP
ESASEEEQGQ AEEEEAESGE EEEEEEEEGE GEEEEEEEEE EEEEEEEGEE GEEQSEAGSE
GSGVDVAKDL SPTAKFGSMT PGYTPHTSLG GMAESTFSTI SRSEVAEQSR PLFGEITKNA
PPLFPAAGPL PVSPRSPSPV RGVVRSSILR PTETPRPVDT TPVPSRKGLL QKTASFGMST
GQKPAVDPNV KAQRKLAEKL KAEEQVLVDP EDEGIQQILQ SKVEPTLRMN EFLAVDTKLA
PMKPGRDDVP NACETLWRDI NRMIDRLGLN SRSLQSFILG HTSHGKPGGR QKDDLEKPDD
WVLIEAYDLG DMIDNKLARE LEAGRIKDVE GTMAAIHNLG RDLAKLRAKE EDLRKLFNAQ
VDPDQIALTK ALPLSAEQLA QQNELRRSYA SFSKLLTEAE EALTVLKAKL ASANAARGRR
GAGAAQVPTV DAIIRTINKM TSMAEKRSGD IDVLESQMRK LRIGSLGPAG TPNGNGVGAG
TVVPATPGGG GRSRESSPFV TPQSSRRAMF MSPGSVGTAT PRGLLAATGT PSPTKKKLSM
YTAEEKRELR AREAKRKATL RMLRESLARV GPNVVRLRDD D