NU5C_BRADI
ID NU5C_BRADI Reviewed; 741 AA.
AC B3TN96;
DT 20-JAN-2009, integrated into UniProtKB/Swiss-Prot.
DT 02-SEP-2008, sequence version 1.
DT 25-MAY-2022, entry version 41.
DE RecName: Full=NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic;
DE EC=7.1.1.-;
DE AltName: Full=NAD(P)H dehydrogenase subunit 5;
DE AltName: Full=NADH-plastoquinone oxidoreductase subunit 5;
GN Name=ndhF;
OS Brachypodium distachyon (Purple false brome) (Trachynia distachya).
OG Plastid; Chloroplast.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Stipodae; Brachypodieae; Brachypodium.
OX NCBI_TaxID=15368;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Bd21;
RX PubMed=18710514; DOI=10.1186/1756-0500-1-61;
RA Bortiri E., Coleman-Derr D., Lazo G.R., Anderson O.D., Gu Y.Q.;
RT "The complete chloroplast genome sequence of Brachypodium distachyon:
RT sequence comparison and phylogenetic analysis of eight grass plastomes.";
RL BMC Res. Notes 1:61-61(2008).
CC -!- FUNCTION: NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN
CC and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain
CC and possibly in a chloroplast respiratory chain. The immediate electron
CC acceptor for the enzyme in this species is believed to be
CC plastoquinone. Couples the redox reaction to proton translocation, and
CC thus conserves the redox energy in a proton gradient (By similarity).
CC {ECO:0000250}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a plastoquinone + (n+1) H(+)(in) + NADH = a plastoquinol + n
CC H(+)(out) + NAD(+); Xref=Rhea:RHEA:42608, Rhea:RHEA-COMP:9561,
CC Rhea:RHEA-COMP:9562, ChEBI:CHEBI:15378, ChEBI:CHEBI:17757,
CC ChEBI:CHEBI:57540, ChEBI:CHEBI:57945, ChEBI:CHEBI:62192;
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a plastoquinone + (n+1) H(+)(in) + NADPH = a plastoquinol + n
CC H(+)(out) + NADP(+); Xref=Rhea:RHEA:42612, Rhea:RHEA-COMP:9561,
CC Rhea:RHEA-COMP:9562, ChEBI:CHEBI:15378, ChEBI:CHEBI:17757,
CC ChEBI:CHEBI:57783, ChEBI:CHEBI:58349, ChEBI:CHEBI:62192;
CC -!- SUBUNIT: NDH is composed of at least 16 different subunits, 5 of which
CC are encoded in the nucleus. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast thylakoid membrane
CC {ECO:0000250}; Multi-pass membrane protein {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the complex I subunit 5 family. {ECO:0000305}.
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DR EMBL; EU325680; ACF08684.1; -; Genomic_DNA.
DR RefSeq; YP_002000532.1; NC_011032.1.
DR AlphaFoldDB; B3TN96; -.
DR SMR; B3TN96; -.
DR GeneID; 6439789; -.
DR KEGG; bdi:6439789; -.
DR InParanoid; B3TN96; -.
DR OrthoDB; 526738at2759; -.
DR Proteomes; UP000008810; Chloroplast.
DR GO; GO:0009535; C:chloroplast thylakoid membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0008137; F:NADH dehydrogenase (ubiquinone) activity; IEA:InterPro.
DR GO; GO:0003954; F:NADH dehydrogenase activity; IBA:GO_Central.
DR GO; GO:0048038; F:quinone binding; IEA:UniProtKB-KW.
DR GO; GO:0042773; P:ATP synthesis coupled electron transport; IEA:InterPro.
DR GO; GO:0015990; P:electron transport coupled proton transport; IBA:GO_Central.
DR InterPro; IPR002128; NADH_UbQ_OxRdtase_chlpt_su5_C.
DR InterPro; IPR018393; NADHpl_OxRdtase_5_subgr.
DR InterPro; IPR001750; ND/Mrp_mem.
DR InterPro; IPR003945; NU5C-like.
DR InterPro; IPR001516; Proton_antipo_N.
DR PANTHER; PTHR42829; PTHR42829; 1.
DR Pfam; PF01010; Proton_antipo_C; 1.
DR Pfam; PF00361; Proton_antipo_M; 1.
DR Pfam; PF00662; Proton_antipo_N; 1.
DR TIGRFAMs; TIGR01974; NDH_I_L; 1.
PE 3: Inferred from homology;
KW Chloroplast; Membrane; NAD; NADP; Plastid; Plastoquinone; Quinone;
KW Reference proteome; Thylakoid; Translocase; Transmembrane;
KW Transmembrane helix; Transport.
FT CHAIN 1..741
FT /note="NAD(P)H-quinone oxidoreductase subunit 5,
FT chloroplastic"
FT /id="PRO_0000360913"
FT TRANSMEM 9..29
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 39..59
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 89..109
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 125..145
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 147..167
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 184..204
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 216..238
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 258..278
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 280..300
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 327..347
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 354..374
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 396..416
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 425..445
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 544..564
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 612..632
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 721..741
FT /note="Helical"
FT /evidence="ECO:0000255"
SQ SEQUENCE 741 AA; 83410 MW; BE08D48D2A6565BA CRC64;
MEHTYQYAWV IPLLPLPVIL SMGFGLFLIP IATKNFRRIW AFPSVLLLSI AMVFSVQLSI
QQINGSSIYQ YLWSWTINND FSLEFGYLID PLTSIMLMLI TTVGILVLIY SDGYMSHDEG
YLRFFIYISF FNISMLGLVT SSNLIQIYFF WELVGMCSYL LIGFWFTRPI AASACQKAFV
TNRIGDFGLL LGILGFFWIT GSLEFRDLFQ TANNWIPNNG TTSLLTTLCA FLLFLGAVAK
SAQFPLHVWL PDAMEGPTPI SALIHAATMV AAGIFLLARL LPLFISLPLI MTFISLVGTI
TLFLGATLAL AQRDIKRTLA YSTMSQLGYM MLALGIGSYQ AALFHLITHA YSKALLFLGS
GSIIHSMEPL VGYSPDKSQN MALMGGLRKY IPITRTAFLW GTLSICGIPP LACFWSKDEI
LSNSWLYSPF FGIIASFTAG LTAFYMFRIY LLTFDGYFRF HFQNYSSTKE GSLYSISLWG
NRIPKGVSKD FVLSTTKSEV YFFSQNISIS KGQGNTRNRI ESFSTSFGSK NVFTYPHETG
NTMLFPLLIL LLFTFFIGFI GIPFDNETMD NGIAGVTILS KWLIPSINFT QESSNSSINS
YEFITNAISS VSLVILGLFI AYIFYGSAYS FFQNLDLQNS FYKGSPKKNF FYQVKKKIYS
WSYNRGYIDI FYSRLFTLGI RGLTELTEFF DKGVIDGITN GVGLASFCIG EEIKYVGGGR
ISSYLFFFLC YVSVFLFFFL S
