NU5M_DANRE
ID NU5M_DANRE Reviewed; 606 AA.
AC Q9MIY0;
DT 06-JUN-2002, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 113.
DE RecName: Full=NADH-ubiquinone oxidoreductase chain 5;
DE EC=7.1.1.2 {ECO:0000250|UniProtKB:P03915};
DE AltName: Full=NADH dehydrogenase subunit 5;
GN Name=mt-nd5; Synonyms=mtnd5, nd5;
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OG Mitochondrion.
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danio.
OX NCBI_TaxID=7955;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen {ECO:0000312|Proteomes:UP000000437};
RX PubMed=11691861; DOI=10.1101/gr.156801;
RA Broughton R.E., Milam J.E., Roe B.A.;
RT "The complete sequence of the zebrafish (Danio rerio) mitochondrial genome
RT and evolutionary patterns in vertebrate mitochondrial DNA.";
RL Genome Res. 11:1958-1967(2001).
CC -!- FUNCTION: Core subunit of the mitochondrial membrane respiratory chain
CC NADH dehydrogenase (Complex I) which catalyzes electron transfer from
CC NADH through the respiratory chain, using ubiquinone as an electron
CC acceptor. Essential for the catalytic activity and assembly of complex
CC I. {ECO:0000250|UniProtKB:P03915}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a ubiquinone + 5 H(+)(in) + NADH = a ubiquinol + 4 H(+)(out) +
CC NAD(+); Xref=Rhea:RHEA:29091, Rhea:RHEA-COMP:9565, Rhea:RHEA-
CC COMP:9566, ChEBI:CHEBI:15378, ChEBI:CHEBI:16389, ChEBI:CHEBI:17976,
CC ChEBI:CHEBI:57540, ChEBI:CHEBI:57945; EC=7.1.1.2;
CC Evidence={ECO:0000250|UniProtKB:P03915};
CC -!- SUBUNIT: Core subunit of respiratory chain NADH dehydrogenase (Complex
CC I) which is composed of 45 different subunits.
CC {ECO:0000250|UniProtKB:P03920}.
CC -!- SUBCELLULAR LOCATION: Mitochondrion inner membrane
CC {ECO:0000250|UniProtKB:P03920}; Multi-pass membrane protein
CC {ECO:0000255}.
CC -!- SIMILARITY: Belongs to the complex I subunit 5 family. {ECO:0000305}.
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DR EMBL; AC024175; AAF74307.1; -; Genomic_DNA.
DR RefSeq; NP_059341.1; NC_002333.2.
DR AlphaFoldDB; Q9MIY0; -.
DR SMR; Q9MIY0; -.
DR STRING; 7955.ENSDARP00000087879; -.
DR PaxDb; Q9MIY0; -.
DR Ensembl; ENSDART00000093622; ENSDARP00000087879; ENSDARG00000063921.
DR GeneID; 140535; -.
DR KEGG; dre:140535; -.
DR CTD; 4540; -.
DR ZFIN; ZDB-GENE-011205-12; mt-nd5.
DR eggNOG; KOG4668; Eukaryota.
DR GeneTree; ENSGT00730000111303; -.
DR HOGENOM; CLU_007100_6_0_1; -.
DR InParanoid; Q9MIY0; -.
DR OMA; GVGIMSF; -.
DR OrthoDB; 526738at2759; -.
DR PhylomeDB; Q9MIY0; -.
DR TreeFam; TF342974; -.
DR Reactome; R-DRE-611105; Respiratory electron transport.
DR Reactome; R-DRE-6799198; Complex I biogenesis.
DR PRO; PR:Q9MIY0; -.
DR Proteomes; UP000000437; Mitochondrion MT.
DR Proteomes; UP000814640; Mitochondrion.
DR Bgee; ENSDARG00000063921; Expressed in brain and 19 other tissues.
DR GO; GO:0005743; C:mitochondrial inner membrane; ISS:UniProtKB.
DR GO; GO:0005747; C:mitochondrial respiratory chain complex I; IBA:GO_Central.
DR GO; GO:0008137; F:NADH dehydrogenase (ubiquinone) activity; ISS:UniProtKB.
DR GO; GO:0003954; F:NADH dehydrogenase activity; IBA:GO_Central.
DR GO; GO:0015990; P:electron transport coupled proton transport; IBA:GO_Central.
DR GO; GO:0006120; P:mitochondrial electron transport, NADH to ubiquinone; ISS:UniProtKB.
DR GO; GO:0032981; P:mitochondrial respiratory chain complex I assembly; ISS:UniProtKB.
DR InterPro; IPR010934; NADH_DH_su5_C.
DR InterPro; IPR018393; NADHpl_OxRdtase_5_subgr.
DR InterPro; IPR001750; ND/Mrp_mem.
DR InterPro; IPR003945; NU5C-like.
DR InterPro; IPR001516; Proton_antipo_N.
DR PANTHER; PTHR42829; PTHR42829; 1.
DR Pfam; PF06455; NADH5_C; 1.
DR Pfam; PF00361; Proton_antipo_M; 1.
DR Pfam; PF00662; Proton_antipo_N; 1.
DR TIGRFAMs; TIGR01974; NDH_I_L; 1.
PE 3: Inferred from homology;
KW Electron transport; Membrane; Mitochondrion; Mitochondrion inner membrane;
KW NAD; Reference proteome; Respiratory chain; Translocase; Transmembrane;
KW Transmembrane helix; Transport; Ubiquinone.
FT CHAIN 1..606
FT /note="NADH-ubiquinone oxidoreductase chain 5"
FT /id="PRO_0000118071"
FT TRANSMEM 2..22
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 36..56
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 89..109
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 115..135
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 140..160
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 178..198
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 212..234
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 242..262
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 273..293
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 302..322
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 328..348
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 371..391
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 405..425
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 462..482
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 488..508
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 519..539
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 556..576
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 582..602
FT /note="Helical"
FT /evidence="ECO:0000255"
SQ SEQUENCE 606 AA; 68085 MW; 5293E0AC9BDD4431 CRC64;
MTDMIMPLTL ILIFAVLSYP LLKPKSYSKS NNSFQAWNAV HVSFLISLIP LTMMLYKESD
HVVMCWSWMN TQAFNVDLSF KFDYYSVTFT SIALFITWSI LEFASWYMAS YPQKELFYKY
LLLFLMSMII LVTANNLFQL FIGWEGVGIM SFLLIGWWFG RTEANTASLQ AVIYNRMGDI
GFILTLAWMA MYLNSWDIQQ IFILSKDFDM TIPQIGLIIA ATGKSAQFTL HPWLPSAMEG
PTPVSALLHS STMVVAGIFL LIRLHPIMET NKLAPTICLC LGALTTLFAA TCALTQNDIK
KIVAFSTSSQ LGLMMVAIGL NQPHLAFFHI CTHAFFKAML FLCSGAIIHS LNNEQDIRKM
GGTYHTLPMT TNYLTIGKMA LMGTPFLAGF FSKDAILEAM TTSHLNAWAL TLTLIATSFT
AVYSFRMIYL VCLGSPRHKT YETIDENHIP TNTIQRLAWG SIIAGLIISY TMIPLKTPIL
TMPIYLKLAA ILVTLLGIIL GLEISTLANK INKNTTPGIP FHFSISLIFF PILHRLIPMR
KLFMGESAAT KIEKSWSELF GPCGIAFTLM TVATFVKDHR MASIKSYLAV FLTSIILKMM
MLKLYT
