ARP4A_ARATH
ID ARP4A_ARATH Reviewed; 145 AA.
AC Q9C9B2; Q8LKR1;
DT 26-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2001, sequence version 1.
DT 03-AUG-2022, entry version 108.
DE RecName: Full=Actin-related protein 4A;
DE AltName: Full=Actin-related protein 5;
GN Name=ARP4A; Synonyms=ARP5; OrderedLocusNames=At1g73910; ORFNames=F2P9.22;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], IDENTIFICATION, TISSUE SPECIFICITY, AND GENE
RP FAMILY.
RC STRAIN=cv. Columbia;
RX PubMed=11891255; DOI=10.1104/pp.010906;
RA McKinney E.C., Kandasamy M.K., Meagher R.B.;
RT "Arabidopsis contains ancient classes of differentially expressed actin-
RT related protein genes.";
RL Plant Physiol. 128:997-1007(2002).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Bautista V.R., Kim C.J., Chen H., Quinitio C., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (NOV-2006) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP REVIEW, GENE FAMILY, AND NOMENCLATURE.
RX PubMed=15063870; DOI=10.1016/j.tplants.2004.02.004;
RA Kandasamy M.K., Deal R.B., McKinney E.C., Meagher R.B.;
RT "Plant actin-related proteins.";
RL Trends Plant Sci. 9:196-202(2004).
CC -!- TISSUE SPECIFICITY: Expressed in roots, leaves and flowers.
CC {ECO:0000269|PubMed:11891255}.
CC -!- SIMILARITY: Belongs to the actin family. ARP4 subfamily. {ECO:0000305}.
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DR EMBL; AF507913; AAM53245.1; -; mRNA.
DR EMBL; AC016662; AAG52523.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE35523.1; -; Genomic_DNA.
DR EMBL; CP002684; ANM60797.1; -; Genomic_DNA.
DR EMBL; BT029316; ABK32130.1; -; mRNA.
DR EMBL; BK000424; DAA00029.1; -; Genomic_DNA.
DR PIR; F96766; F96766.
DR RefSeq; NP_001323057.1; NM_001334612.1.
DR RefSeq; NP_177531.1; NM_106050.2.
DR AlphaFoldDB; Q9C9B2; -.
DR SMR; Q9C9B2; -.
DR BioGRID; 28947; 76.
DR STRING; 3702.AT1G73910.1; -.
DR PaxDb; Q9C9B2; -.
DR PRIDE; Q9C9B2; -.
DR ProteomicsDB; 246890; -.
DR EnsemblPlants; AT1G73910.1; AT1G73910.1; AT1G73910.
DR EnsemblPlants; AT1G73910.2; AT1G73910.2; AT1G73910.
DR GeneID; 843728; -.
DR Gramene; AT1G73910.1; AT1G73910.1; AT1G73910.
DR Gramene; AT1G73910.2; AT1G73910.2; AT1G73910.
DR KEGG; ath:AT1G73910; -.
DR Araport; AT1G73910; -.
DR TAIR; locus:2031536; AT1G73910.
DR eggNOG; KOG0676; Eukaryota.
DR HOGENOM; CLU_027965_7_4_1; -.
DR InParanoid; Q9C9B2; -.
DR OMA; SHIFCIR; -.
DR PhylomeDB; Q9C9B2; -.
DR PRO; PR:Q9C9B2; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9C9B2; baseline and differential.
DR Genevisible; Q9C9B2; AT.
DR GO; GO:0035267; C:NuA4 histone acetyltransferase complex; IBA:GO_Central.
DR GO; GO:0016514; C:SWI/SNF complex; IBA:GO_Central.
DR GO; GO:0003682; F:chromatin binding; IBA:GO_Central.
DR GO; GO:0043967; P:histone H4 acetylation; IBA:GO_Central.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR InterPro; IPR004000; Actin.
DR InterPro; IPR043129; ATPase_NBD.
DR PANTHER; PTHR11937; PTHR11937; 1.
DR Pfam; PF00022; Actin; 1.
DR SUPFAM; SSF53067; SSF53067; 1.
PE 2: Evidence at transcript level;
KW Reference proteome.
FT CHAIN 1..145
FT /note="Actin-related protein 4A"
FT /id="PRO_0000320531"
FT REGION 47..66
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 51..66
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 1
FT /note="M -> MG (in Ref. 1; AAM53245)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 145 AA; 15993 MW; 1E404EA0F624BFB2 CRC64;
MYGGDEVSAI VVDLGSHTCK AGYAGEDAPK AVFPSVVGAI DGNGMDIDDA ANTTEDAKES
DKEKGKRKLY TGSQALNFRR DQMEILSPTK DGIVTDWDMV DNVWDHAFRN CLMIDPTEHP
MLLAEPPLNS QQQREKSGFS TFYRC
