ID   ARP4_ORYSJ              Reviewed;         443 AA.
AC   Q6ZJW9; A3BPG0; B7ERY7;
DT   26-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT   05-JUL-2004, sequence version 1.
DT   03-AUG-2022, entry version 109.
DE   RecName: Full=Actin-related protein 4;
GN   Name=ARP4; OrderedLocusNames=Os08g0137200, LOC_Os08g04280;
GN   ORFNames=OJ1613_G04.21, OsJ_024932;
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16100779; DOI=10.1038/nature03895;
RG   International rice genome sequencing project (IRGSP);
RT   "The map-based sequence of the rice genome.";
RL   Nature 436:793-800(2005).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=18089549; DOI=10.1093/nar/gkm978;
RG   The rice annotation project (RAP);
RT   "The rice annotation project database (RAP-DB): 2008 update.";
RL   Nucleic Acids Res. 36:D1028-D1033(2008).
RN   [3]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA   Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA   Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA   Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA   Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT   "Improvement of the Oryza sativa Nipponbare reference genome using next
RT   generation sequence and optical map data.";
RL   Rice 6:4-4(2013).
RN   [4]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA   Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA   Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA   Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA   Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA   Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA   Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA   Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA   Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA   Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA   Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA   Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA   Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA   Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA   McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT   "The genomes of Oryza sativa: a history of duplications.";
RL   PLoS Biol. 3:266-281(2005).
RN   [5]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=12869764; DOI=10.1126/science.1081288;
RG   The rice full-length cDNA consortium;
RT   "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT   japonica rice.";
RL   Science 301:376-379(2003).
RN   [6]
RP   REVIEW, GENE FAMILY, AND NOMENCLATURE.
RX   PubMed=15063870; DOI=10.1016/j.tplants.2004.02.004;
RA   Kandasamy M.K., Deal R.B., McKinney E.C., Meagher R.B.;
RT   "Plant actin-related proteins.";
RL   Trends Plant Sci. 9:196-202(2004).
CC   -!- FUNCTION: Involved in several developmental processes including
CC       organization of plant organs, flowering time, anther development,
CC       flower senescence and fertility, probably by regulating the chromatin
CC       structure. {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250|UniProtKB:Q84M92}. Cytoplasm
CC       {ECO:0000250|UniProtKB:Q84M92}.
CC   -!- SIMILARITY: Belongs to the actin family. ARP4 subfamily. {ECO:0000305}.
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DR   EMBL; AP003896; BAD03074.1; -; Genomic_DNA.
DR   EMBL; AP008214; BAF22868.1; -; Genomic_DNA.
DR   EMBL; AP014964; BAT03751.1; -; Genomic_DNA.
DR   EMBL; CM000145; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AK065561; -; NOT_ANNOTATED_CDS; mRNA.
DR   EMBL; AK101582; BAG95134.1; -; mRNA.
DR   RefSeq; XP_015649887.1; XM_015794401.1.
DR   AlphaFoldDB; Q6ZJW9; -.
DR   SMR; Q6ZJW9; -.
DR   STRING; 4530.OS08T0137200-01; -.
DR   PaxDb; Q6ZJW9; -.
DR   PRIDE; Q6ZJW9; -.
DR   EnsemblPlants; Os08t0137200-01; Os08t0137200-01; Os08g0137200.
DR   GeneID; 4344621; -.
DR   Gramene; Os08t0137200-01; Os08t0137200-01; Os08g0137200.
DR   KEGG; osa:4344621; -.
DR   eggNOG; KOG0679; Eukaryota.
DR   HOGENOM; CLU_027965_6_2_1; -.
DR   InParanoid; Q6ZJW9; -.
DR   OMA; GIVEKRC; -.
DR   OrthoDB; 649708at2759; -.
DR   Proteomes; UP000000763; Chromosome 8.
DR   Proteomes; UP000007752; Chromosome 8.
DR   Proteomes; UP000059680; Chromosome 8.
DR   Genevisible; Q6ZJW9; OS.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0035267; C:NuA4 histone acetyltransferase complex; IBA:GO_Central.
DR   GO; GO:0016514; C:SWI/SNF complex; IBA:GO_Central.
DR   GO; GO:0003682; F:chromatin binding; IBA:GO_Central.
DR   GO; GO:0006325; P:chromatin organization; IEA:UniProtKB-KW.
DR   GO; GO:0043967; P:histone H4 acetylation; IBA:GO_Central.
DR   GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR   InterPro; IPR004000; Actin.
DR   InterPro; IPR043129; ATPase_NBD.
DR   PANTHER; PTHR11937; PTHR11937; 1.
DR   Pfam; PF00022; Actin; 1.
DR   SMART; SM00268; ACTIN; 1.
DR   SUPFAM; SSF53067; SSF53067; 2.
PE   2: Evidence at transcript level;
KW   Chromatin regulator; Cytoplasm; Developmental protein; Nucleus;
KW   Reference proteome.
FT   CHAIN           1..443
FT                   /note="Actin-related protein 4"
FT                   /id="PRO_0000320529"
FT   REGION          36..69
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        45..69
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   CONFLICT        346
FT                   /note="S -> I (in Ref. 5; AK065561)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   443 AA;  48494 MW;  DC51028E153CDEBA CRC64;
     MYGGDEVSAI VIDVGSYSCK AGYAGDDTPK AVFPSVVGSI EQTGETDEAK ADKEAEAASD
     SKNGAKPMDV DKAKTKRKLY VGQELEFRRD HMEVISPMKD GTVTDWDIVD NIWNHAFRQR
     LLINPEEHPM LIAEPSTNTG QQREKAAELM FEKYKVPALF LAKNAVLTSF ASGRATSLVV
     DSGGGSTVVA AVHDGYVLQK SVATSPIGGE FLTDCMMKSL ESKGVVIRPR YSFKKKEVGP
     GEYKVVDLDL PNTTESYKLY CMRAIASDIK ESVCRVPDTA FDEVAYANVP TTSYELPDGQ
     TIEVGADRFK IPDILFNPSL SQTIPGVDGF ADSMSVRGLP RMVIDSVNRC DVDIRKELLS
     SILLSGGSSS ILQLKERLEK EVLEESSGNT RVKVLASGNS VERRFSVWIG GSILASLGSF
     QQMWFSKAEY EEHGVSYIQR KCP