NUP93_XENLA
ID NUP93_XENLA Reviewed; 820 AA.
AC Q7ZX96; P70035;
DT 26-APR-2004, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2003, sequence version 1.
DT 03-AUG-2022, entry version 75.
DE RecName: Full=Nuclear pore complex protein Nup93;
DE AltName: Full=93 kDa nucleoporin;
DE AltName: Full=An4a;
DE AltName: Full=Nucleoporin Nup93;
GN Name=nup93;
OS Xenopus laevis (African clawed frog).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus.
OX NCBI_TaxID=8355;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], AND DEVELOPMENTAL STAGE.
RC TISSUE=Oocyte;
RX PubMed=8952061;
RX DOI=10.1002/(sici)1520-6408(1996)19:3<190::aid-dvg2>3.0.co;2-4;
RA Hudson J.W., Alarcon V.B., Elinson R.P.;
RT "Identification of new localized RNAs in the Xenopus oocyte by differential
RT display PCR.";
RL Dev. Genet. 19:190-198(1996).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Embryo;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (JAN-2003) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Plays a role in the nuclear pore complex (NPC) assembly
CC and/or maintenance. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus membrane {ECO:0000250}; Peripheral
CC membrane protein {ECO:0000250}. Nucleus, nuclear pore complex
CC {ECO:0000250}. Note=Localizes at the nuclear basket and at or near the
CC nuclear entry to the gated channel of the pore. {ECO:0000250}.
CC -!- DEVELOPMENTAL STAGE: Expressed throughout early development, with
CC embryonic expression primarily in anterior neural tissues.
CC {ECO:0000269|PubMed:8952061}.
CC -!- SIMILARITY: Belongs to the nucleoporin interacting component (NIC)
CC family. {ECO:0000305}.
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DR EMBL; U63919; AAB49669.1; -; mRNA.
DR EMBL; BC045089; AAH45089.1; -; mRNA.
DR RefSeq; NP_001080591.1; NM_001087122.1.
DR PDB; 7VCI; EM; 8.10 A; U=1-820.
DR PDB; 7VOP; EM; 8.70 A; U=1-820.
DR PDB; 7WB4; EM; 5.60 A; L/O=1-820.
DR PDB; 7WKK; EM; 4.20 A; C/E/c/e=1-820.
DR PDBsum; 7VCI; -.
DR PDBsum; 7VOP; -.
DR PDBsum; 7WB4; -.
DR PDBsum; 7WKK; -.
DR AlphaFoldDB; Q7ZX96; -.
DR SMR; Q7ZX96; -.
DR BioGRID; 98525; 2.
DR DIP; DIP-61693N; -.
DR IntAct; Q7ZX96; 5.
DR MINT; Q7ZX96; -.
DR MaxQB; Q7ZX96; -.
DR GeneID; 380283; -.
DR KEGG; xla:380283; -.
DR CTD; 380283; -.
DR Xenbase; XB-GENE-5823157; nup93.L.
DR OMA; LLMCGQF; -.
DR OrthoDB; 187731at2759; -.
DR Proteomes; UP000186698; Chromosome 4L.
DR Bgee; 380283; Expressed in testis and 19 other tissues.
DR GO; GO:0005829; C:cytosol; TAS:Reactome.
DR GO; GO:0031965; C:nuclear membrane; ISS:UniProtKB.
DR GO; GO:0034399; C:nuclear periphery; ISS:UniProtKB.
DR GO; GO:0005643; C:nuclear pore; ISS:UniProtKB.
DR GO; GO:0017056; F:structural constituent of nuclear pore; ISS:UniProtKB.
DR GO; GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.
DR GO; GO:0051292; P:nuclear pore complex assembly; ISS:UniProtKB.
DR GO; GO:0015031; P:protein transport; IEA:UniProtKB-KW.
DR InterPro; IPR007231; Nucleoporin_int_Nup93/Nic96.
DR PANTHER; PTHR11225; PTHR11225; 1.
DR Pfam; PF04097; Nic96; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Membrane; mRNA transport; Nuclear pore complex; Nucleus;
KW Protein transport; Reference proteome; Translocation; Transport.
FT CHAIN 1..820
FT /note="Nuclear pore complex protein Nup93"
FT /id="PRO_0000124784"
FT CONFLICT 41
FT /note="E -> C (in Ref. 1; AAB49669)"
FT /evidence="ECO:0000305"
FT CONFLICT 62..64
FT /note="VLL -> CTA (in Ref. 1; AAB49669)"
FT /evidence="ECO:0000305"
FT CONFLICT 102
FT /note="L -> H (in Ref. 1; AAB49669)"
FT /evidence="ECO:0000305"
FT CONFLICT 305..306
FT /note="PI -> TV (in Ref. 1; AAB49669)"
FT /evidence="ECO:0000305"
FT CONFLICT 404
FT /note="H -> N (in Ref. 1; AAB49669)"
FT /evidence="ECO:0000305"
FT CONFLICT 433
FT /note="Q -> E (in Ref. 1; AAB49669)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 820 AA; 93454 MW; 12EDE67C51157D4A CRC64;
MDGEGFGELL QQAEQLAAET EGVTELPHVE RNLQEIQQAG ERLRSKTMTR TSQESANVKA
SVLLGSRGLD ISHISQRLES LSAATTFEPL EPVKDTDIQG FLKNEKDNAL LSAIEESRKR
TFVMAEEYHR ESMLVEWEQV KQRVLHTLLA SGEDALDFTQ ESETSYISES GAPGRSSLDN
VEMAYARQMY MYNEKVVSGH LQPSLVDLCT EAAERLDDKN VSDLWVMVKQ MTDVPLIPAS
DTLKSRCSGQ MQMAFVRQAL NYLEQSYKNY TLISVFANLQ QAQLGGVPGT YNLVRSFLNI
RLPTPIPGLQ DGEIEGYPVW ALIYYCMRCG DLMAAQQVVN RAQHQLGDFK NCFQEYIHNK
DRRLSPTTEN KLRLHYRRAV RASTDPYKRA VYCIIGRCDV SDNHSEVADK TEDYLWLKLS
QVCFEDEANS SPQDRLTLPQ FQKQLFEDYG ESHFAVNQQP YLYFQVLFLT AQFEAAIAFL
FRLERTRCHA VHVALALFEL KLLLKSTGQS AQLLSQEPGE PQGVRRLNFI RLLMLYTRKF
EPTDPREALQ YFYFLRNEKD NQGESMFLRC VSELVIESRE FDMLLGKLEK DGSRKPGAID
KFTRDTKTII NKVASVAENK GLFEEAAKLY DLAKNPDKVL ELTNKLLSPV VSQISAPQSN
RERLKNMALA IAERYKSQGV SAEKSINSTF YLLLDLITFF DEYHAGHIDL SFDVIERLKL
VPLSQDSVEE RVAAFRNFSD EIRHNLSEIL LATMNILFTQ YKRLKGSGPT TLGRPQRVQE
DKDSVLRSQA RALITFAGMI PYRMSGDTNA RLVQMEVLMN