ARP6_CHICK
ID ARP6_CHICK Reviewed; 396 AA.
AC Q9DEE9;
DT 27-JAN-2003, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 105.
DE RecName: Full=Actin-related protein 6;
DE Short=gArp6;
DE AltName: Full=gARPX;
GN Name=ACTR6;
OS Gallus gallus (Chicken).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae;
OC Phasianinae; Gallus.
OX NCBI_TaxID=9031;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], AND DEVELOPMENTAL STAGE.
RC TISSUE=Gonad;
RX PubMed=11368909; DOI=10.1016/s0378-1119(01)00420-6;
RA Kato M., Sasaki M., Mizuno S., Harata M.;
RT "Novel actin-related proteins in vertebrates: similarities of structure and
RT expression pattern to Arp6 localized on Drosophila heterochromatin.";
RL Gene 268:133-140(2001).
RN [2]
RP SUBCELLULAR LOCATION, AND INTERACTION WITH CBX1 AND CBX3.
RX PubMed=16487625; DOI=10.1016/j.ejcb.2005.12.006;
RA Ohfuchi E., Kato M., Sasaki M., Sugimoto K., Oma Y., Harata M.;
RT "Vertebrate Arp6, a novel nuclear actin-related protein, interacts with
RT heterochromatin protein 1.";
RL Eur. J. Cell Biol. 85:411-421(2006).
RN [3]
RP FUNCTION.
RX PubMed=26164235; DOI=10.1016/j.bbrc.2015.07.005;
RA Kitamura H., Matsumori H., Kalendova A., Hozak P., Goldberg I.G., Nakao M.,
RA Saitoh N., Harata M.;
RT "The actin family protein ARP6 contributes to the structure and the
RT function of the nucleolus.";
RL Biochem. Biophys. Res. Commun. 464:554-560(2015).
CC -!- FUNCTION: Required for formation and/or maintenance of the proper
CC nucleolar structure and function (By similarity). Plays a dual role in
CC the regulation of ribosomal DNA (rDNA) transcription (PubMed:26164235).
CC In the presence of high glucose, it maintains active rDNA transcription
CC through H2A.Z deposition and under glucose starvation, is required for
CC the repression of rDNA transcription, and this function may be
CC independent of H2A.Z (PubMed:26164235). {ECO:0000250|UniProtKB:Q9GZN1,
CC ECO:0000269|PubMed:26164235}.
CC -!- SUBUNIT: Interacts with CBX1 and CBX3. {ECO:0000269|PubMed:16487625}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm, cytoskeleton
CC {ECO:0000250|UniProtKB:P45890}. Nucleus {ECO:0000269|PubMed:16487625}.
CC Nucleus, nucleolus {ECO:0000250|UniProtKB:Q9GZN1}. Note=Colocalizes
CC with HP1 family proteins at pericentric heterochromatin.
CC {ECO:0000269|PubMed:16487625}.
CC -!- DEVELOPMENTAL STAGE: Expressed abundantly in the early developmental
CC stages. {ECO:0000269|PubMed:11368909}.
CC -!- SIMILARITY: Belongs to the actin family. ARP6 subfamily. {ECO:0000305}.
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DR EMBL; AB038230; BAB20763.1; -; mRNA.
DR RefSeq; NP_989968.1; NM_204637.1.
DR AlphaFoldDB; Q9DEE9; -.
DR SMR; Q9DEE9; -.
DR STRING; 9031.ENSGALP00000018828; -.
DR PaxDb; Q9DEE9; -.
DR Ensembl; ENSGALT00000064051; ENSGALP00000045330; ENSGALG00000040976.
DR GeneID; 395348; -.
DR KEGG; gga:395348; -.
DR CTD; 64431; -.
DR VEuPathDB; HostDB:geneid_395348; -.
DR eggNOG; KOG0680; Eukaryota.
DR GeneTree; ENSGT00720000108833; -.
DR InParanoid; Q9DEE9; -.
DR OMA; FFEEYEC; -.
DR OrthoDB; 649708at2759; -.
DR PhylomeDB; Q9DEE9; -.
DR TreeFam; TF105780; -.
DR PRO; PR:Q9DEE9; -.
DR Proteomes; UP000000539; Chromosome 1.
DR Bgee; ENSGALG00000040976; Expressed in spermatid and 14 other tissues.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR GO; GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
DR GO; GO:0005730; C:nucleolus; ISS:UniProtKB.
DR GO; GO:0005634; C:nucleus; IDA:AgBase.
DR GO; GO:0000812; C:Swr1 complex; IBA:GO_Central.
DR GO; GO:0031491; F:nucleosome binding; IBA:GO_Central.
DR GO; GO:0043486; P:histone exchange; IBA:GO_Central.
DR GO; GO:0016479; P:negative regulation of transcription by RNA polymerase I; IMP:UniProtKB.
DR GO; GO:0007000; P:nucleolus organization; ISS:UniProtKB.
DR GO; GO:0045943; P:positive regulation of transcription by RNA polymerase I; IMP:UniProtKB.
DR InterPro; IPR004000; Actin.
DR InterPro; IPR030054; Arp6.
DR InterPro; IPR043129; ATPase_NBD.
DR PANTHER; PTHR11937; PTHR11937; 1.
DR PANTHER; PTHR11937:SF47; PTHR11937:SF47; 1.
DR Pfam; PF00022; Actin; 1.
DR SMART; SM00268; ACTIN; 1.
DR SUPFAM; SSF53067; SSF53067; 2.
PE 1: Evidence at protein level;
KW Activator; Cytoplasm; Cytoskeleton; Nucleus; Reference proteome; Repressor;
KW Transcription; Transcription regulation.
FT CHAIN 1..396
FT /note="Actin-related protein 6"
FT /id="PRO_0000089107"
SQ SEQUENCE 396 AA; 45784 MW; E59B800F572D4EE3 CRC64;
MATLVLDNGA YNAKIGYSHA HVSVIPNCQF RSKTARLKTF TANQLDEIKD PSGLFYILPF
QKGYLVNWDV QRQVWDYLFG KEMYQVDFVD TNIIITEPYF NFSSIQESMN EILFEEYQFQ
AVLRVNAGAL SAHRYFRDNP SELCCIIVDS GYSFTHIVPY CRSKKKKEAI IRINVGGKLL
TNHLKEIISY RQLHVMDETH VINQVKEDVC YVSQDFYKDM EIAKLKGEEN TVMVDYVLPD
FSTIKKGFCK PREEMVLSGK YKTGEQILRL TNERFAVPEI LFHPSDIGIQ EMGIPEAIVD
SIQNLPEEMQ PHFFKNIVLT GGNTLFPGFR DRVYSEVRCL TPTDYDVSVV LPENPITYSW
EGGKLISEND DFEDLVVTRE DYEEHGHNIC EEKFDI