ARP7_ARATH
ID ARP7_ARATH Reviewed; 363 AA.
AC Q8L4Y5; Q0WW62; Q9LZY1;
DT 26-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2002, sequence version 1.
DT 25-MAY-2022, entry version 118.
DE RecName: Full=Actin-related protein 7;
GN Name=ARP7; OrderedLocusNames=At3g60830; ORFNames=T4C21.240;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], IDENTIFICATION, TISSUE SPECIFICITY, AND GENE
RP FAMILY.
RC STRAIN=cv. Columbia;
RX PubMed=11891255; DOI=10.1104/pp.010906;
RA McKinney E.C., Kandasamy M.K., Meagher R.B.;
RT "Arabidopsis contains ancient classes of differentially expressed actin-
RT related protein genes.";
RL Plant Physiol. 128:997-1007(2002).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN [6]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 215-363.
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN [7]
RP TISSUE SPECIFICITY, INDUCTION, AND SUBCELLULAR LOCATION.
RX PubMed=12609034; DOI=10.1046/j.1365-313x.2003.01691.x;
RA Kandasamy M.K., McKinney E.C., Meagher R.B.;
RT "Cell cycle-dependent association of Arabidopsis actin-related proteins
RT AtARP4 and AtARP7 with the nucleus.";
RL Plant J. 33:939-948(2003).
RN [8]
RP SUBCELLULAR LOCATION, REVIEW, GENE FAMILY, AND NOMENCLATURE.
RX PubMed=15063870; DOI=10.1016/j.tplants.2004.02.004;
RA Kandasamy M.K., Deal R.B., McKinney E.C., Meagher R.B.;
RT "Plant actin-related proteins.";
RL Trends Plant Sci. 9:196-202(2004).
RN [9]
RP FUNCTION, TISSUE SPECIFICITY, AND SUBCELLULAR LOCATION.
RX PubMed=16040647; DOI=10.1104/pp.105.065326;
RA Kandasamy M.K., McKinney E.C., Deal R.B., Meagher R.B.;
RT "Arabidopsis ARP7 is an essential actin-related protein required for normal
RT embryogenesis, plant architecture, and floral organ abscission.";
RL Plant Physiol. 138:2019-2032(2005).
RN [10]
RP ACETYLATION [LARGE SCALE ANALYSIS] AT MET-1, AND IDENTIFICATION BY MASS
RP SPECTROMETRY [LARGE SCALE ANALYSIS].
RX PubMed=22223895; DOI=10.1074/mcp.m111.015131;
RA Bienvenut W.V., Sumpton D., Martinez A., Lilla S., Espagne C., Meinnel T.,
RA Giglione C.;
RT "Comparative large-scale characterisation of plant vs. mammal proteins
RT reveals similar and idiosyncratic N-alpha acetylation features.";
RL Mol. Cell. Proteomics 11:M111.015131-M111.015131(2012).
CC -!- FUNCTION: Essential protein required during embryogenesis and all plant
CC development stages, probably through a chromatin-mediated regulation of
CC gene expression. {ECO:0000269|PubMed:16040647}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:12609034,
CC ECO:0000269|PubMed:15063870, ECO:0000269|PubMed:16040647}. Cytoplasm
CC {ECO:0000269|PubMed:12609034}. Note=Localized in the nucleus during the
CC interphase, but is released into the cytoplasm during the mitotic phase
CC (PubMed:12609034).
CC -!- TISSUE SPECIFICITY: Mostly expressed in flowers, and, to a lower
CC extent, in roots, seedlings, leaves and siliques (at protein level).
CC {ECO:0000269|PubMed:11891255, ECO:0000269|PubMed:12609034,
CC ECO:0000269|PubMed:16040647}.
CC -!- INDUCTION: Before cytokinesis. {ECO:0000269|PubMed:12609034}.
CC -!- SIMILARITY: Belongs to the actin family. Plant ARP7 subfamily.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=CAB82687.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AF507915; AAM53247.1; -; mRNA.
DR EMBL; AL162295; CAB82687.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002686; AEE80115.1; -; Genomic_DNA.
DR EMBL; AY099661; AAM20512.1; -; mRNA.
DR EMBL; AY128849; AAM91249.1; -; mRNA.
DR EMBL; AY087739; AAM65276.1; -; mRNA.
DR EMBL; AK226494; BAE98636.1; -; mRNA.
DR EMBL; BK000423; DAA00028.1; -; Genomic_DNA.
DR PIR; T47894; T47894.
DR RefSeq; NP_567105.1; NM_115947.3.
DR AlphaFoldDB; Q8L4Y5; -.
DR SMR; Q8L4Y5; -.
DR BioGRID; 10568; 82.
DR STRING; 3702.AT3G60830.1; -.
DR iPTMnet; Q8L4Y5; -.
DR PaxDb; Q8L4Y5; -.
DR PRIDE; Q8L4Y5; -.
DR ProteomicsDB; 246923; -.
DR EnsemblPlants; AT3G60830.1; AT3G60830.1; AT3G60830.
DR GeneID; 825254; -.
DR Gramene; AT3G60830.1; AT3G60830.1; AT3G60830.
DR KEGG; ath:AT3G60830; -.
DR Araport; AT3G60830; -.
DR TAIR; locus:2101866; AT3G60830.
DR eggNOG; KOG0676; Eukaryota.
DR HOGENOM; CLU_027965_0_3_1; -.
DR InParanoid; Q8L4Y5; -.
DR OMA; NVAPEYH; -.
DR OrthoDB; 649708at2759; -.
DR PhylomeDB; Q8L4Y5; -.
DR PRO; PR:Q8L4Y5; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q8L4Y5; baseline and differential.
DR Genevisible; Q8L4Y5; AT.
DR GO; GO:0005829; C:cytosol; HDA:TAIR.
DR GO; GO:0005869; C:dynactin complex; IBA:GO_Central.
DR GO; GO:0005634; C:nucleus; IDA:TAIR.
DR GO; GO:0005200; F:structural constituent of cytoskeleton; ISS:TAIR.
DR GO; GO:0009653; P:anatomical structure morphogenesis; IMP:TAIR.
DR GO; GO:0006325; P:chromatin organization; TAS:TAIR.
DR GO; GO:0009793; P:embryo development ending in seed dormancy; IMP:TAIR.
DR GO; GO:0010227; P:floral organ abscission; IMP:TAIR.
DR InterPro; IPR004000; Actin.
DR InterPro; IPR043129; ATPase_NBD.
DR PANTHER; PTHR11937; PTHR11937; 1.
DR Pfam; PF00022; Actin; 1.
DR PRINTS; PR00190; ACTIN.
DR SMART; SM00268; ACTIN; 1.
DR SUPFAM; SSF53067; SSF53067; 2.
PE 1: Evidence at protein level;
KW Acetylation; Chromatin regulator; Cytoplasm; Developmental protein;
KW Nucleus; Reference proteome.
FT CHAIN 1..363
FT /note="Actin-related protein 7"
FT /id="PRO_0000320542"
FT MOD_RES 1
FT /note="N-acetylmethionine"
FT /evidence="ECO:0007744|PubMed:22223895"
SQ SEQUENCE 363 AA; 39904 MW; 3693313A3EAA0BC0 CRC64;
MEALVVDAGS KFLKAGAAIP DQSPAMIIPS QMKRMVDDGS SSADNPTTVF EDVTLDPIER
GLIRDWDAME DLLRYVVYTG LGWEEGNEGN ILFTDPLCTP KAIREQLVQL MFETFNVSGF
YASEQAVLSL YAVGRISGCT VDIGHGKIDI APVLEGAVQH IASKRFELGG TELTKLFAQE
LGKTNPSMNL SMSDVEKLKE QYANCAEDEI AYKKTQNCEI EQHTLPDGQV ISIGRERYSV
GEALFQPSIL GLEEHGIVEQ LVRIISTVSS ENHRQLLENT VLCGGTTSMT GFESRFQKEA
NLCSSAIRPT LVKPPEYMPE NLGMYSAWVG GAILAKVVFP QNQHVTKADY DETGPSVVHR
KCF
