ID   ARP9_ARATH              Reviewed;         596 AA.
AC   Q9LSW2; Q8GYB3;
DT   26-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT   01-OCT-2000, sequence version 1.
DT   03-AUG-2022, entry version 128.
DE   RecName: Full=Actin-related protein 9;
GN   Name=ARP9; OrderedLocusNames=At5g43500; ORFNames=MWF20.22;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=10718197; DOI=10.1093/dnares/7.1.31;
RA   Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Kotani H.,
RA   Tabata S.;
RT   "Structural analysis of Arabidopsis thaliana chromosome 5. X. Sequence
RT   features of the regions of 3,076,755 bp covered by sixty P1 and TAC
RT   clones.";
RL   DNA Res. 7:31-63(2000).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
RC   STRAIN=cv. Columbia;
RX   PubMed=11910074; DOI=10.1126/science.1071006;
RA   Seki M., Narusaka M., Kamiya A., Ishida J., Satou M., Sakurai T.,
RA   Nakajima M., Enju A., Akiyama K., Oono Y., Muramatsu M., Hayashizaki Y.,
RA   Kawai J., Carninci P., Itoh M., Ishii Y., Arakawa T., Shibata K.,
RA   Shinagawa A., Shinozaki K.;
RT   "Functional annotation of a full-length Arabidopsis cDNA collection.";
RL   Science 296:141-145(2002).
RN   [4]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
RC   STRAIN=cv. Columbia;
RX   PubMed=14593172; DOI=10.1126/science.1088305;
RA   Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA   Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA   Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA   Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA   Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA   Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA   Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA   Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA   Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA   Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA   Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA   Ecker J.R.;
RT   "Empirical analysis of transcriptional activity in the Arabidopsis
RT   genome.";
RL   Science 302:842-846(2003).
RN   [5]
RP   GENE FAMILY.
RX   PubMed=11891255; DOI=10.1104/pp.010906;
RA   McKinney E.C., Kandasamy M.K., Meagher R.B.;
RT   "Arabidopsis contains ancient classes of differentially expressed actin-
RT   related protein genes.";
RL   Plant Physiol. 128:997-1007(2002).
RN   [6]
RP   REVIEW, GENE FAMILY, AND NOMENCLATURE.
RX   PubMed=15063870; DOI=10.1016/j.tplants.2004.02.004;
RA   Kandasamy M.K., Deal R.B., McKinney E.C., Meagher R.B.;
RT   "Plant actin-related proteins.";
RL   Trends Plant Sci. 9:196-202(2004).
CC   -!- ALTERNATIVE PRODUCTS:
CC       Event=Alternative splicing; Named isoforms=2;
CC       Name=1;
CC         IsoId=Q9LSW2-1; Sequence=Displayed;
CC       Name=2;
CC         IsoId=Q9LSW2-2; Sequence=VSP_031653;
CC   -!- SIMILARITY: Belongs to the actin family. ARP8 subfamily. {ECO:0000305}.
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DR   EMBL; AB025638; BAA97429.1; -; Genomic_DNA.
DR   EMBL; CP002688; AED94971.1; -; Genomic_DNA.
DR   EMBL; CP002688; AED94972.1; -; Genomic_DNA.
DR   EMBL; AK117749; BAC42397.1; -; mRNA.
DR   EMBL; AY057568; AAL09807.1; -; mRNA.
DR   RefSeq; NP_199163.1; NM_123716.3. [Q9LSW2-1]
DR   RefSeq; NP_974876.1; NM_203147.2. [Q9LSW2-2]
DR   AlphaFoldDB; Q9LSW2; -.
DR   SMR; Q9LSW2; -.
DR   BioGRID; 19620; 71.
DR   STRING; 3702.AT5G43500.1; -.
DR   iPTMnet; Q9LSW2; -.
DR   PaxDb; Q9LSW2; -.
DR   PRIDE; Q9LSW2; -.
DR   ProteomicsDB; 246924; -. [Q9LSW2-1]
DR   EnsemblPlants; AT5G43500.1; AT5G43500.1; AT5G43500. [Q9LSW2-1]
DR   EnsemblPlants; AT5G43500.2; AT5G43500.2; AT5G43500. [Q9LSW2-2]
DR   GeneID; 834370; -.
DR   Gramene; AT5G43500.1; AT5G43500.1; AT5G43500. [Q9LSW2-1]
DR   Gramene; AT5G43500.2; AT5G43500.2; AT5G43500. [Q9LSW2-2]
DR   KEGG; ath:AT5G43500; -.
DR   Araport; AT5G43500; -.
DR   TAIR; locus:2176516; AT5G43500.
DR   eggNOG; KOG0797; Eukaryota.
DR   InParanoid; Q9LSW2; -.
DR   OMA; DDSKFTW; -.
DR   OrthoDB; 1258783at2759; -.
DR   PhylomeDB; Q9LSW2; -.
DR   PRO; PR:Q9LSW2; -.
DR   Proteomes; UP000006548; Chromosome 5.
DR   ExpressionAtlas; Q9LSW2; baseline and differential.
DR   Genevisible; Q9LSW2; AT.
DR   GO; GO:0031011; C:Ino80 complex; IBA:GO_Central.
DR   GO; GO:0006338; P:chromatin remodeling; IEA:InterPro.
DR   GO; GO:0006302; P:double-strand break repair; IBA:GO_Central.
DR   GO; GO:0006355; P:regulation of transcription, DNA-templated; IBA:GO_Central.
DR   InterPro; IPR004000; Actin.
DR   InterPro; IPR027668; Arp8/plant_Arp9.
DR   InterPro; IPR043129; ATPase_NBD.
DR   PANTHER; PTHR11937; PTHR11937; 1.
DR   PANTHER; PTHR11937:SF13; PTHR11937:SF13; 1.
DR   Pfam; PF00022; Actin; 1.
DR   SMART; SM00268; ACTIN; 1.
DR   SUPFAM; SSF53067; SSF53067; 2.
PE   2: Evidence at transcript level;
KW   Alternative splicing; Reference proteome.
FT   CHAIN           1..596
FT                   /note="Actin-related protein 9"
FT                   /id="PRO_0000320539"
FT   REGION          148..178
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   VAR_SEQ         1..13
FT                   /note="MAKPKSNSHLSWQ -> M (in isoform 2)"
FT                   /evidence="ECO:0000303|PubMed:11910074"
FT                   /id="VSP_031653"
FT   CONFLICT        565
FT                   /note="H -> R (in Ref. 4; BAC42397)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   596 AA;  66470 MW;  B553AD357B68E2C7 CRC64;
     MAKPKSNSHL SWQDYLKTVA PTQILSERGA NLVVINLGSA NVRVGLAMDE KPFNVPNCIA
     RYITQSGKPT VVDQMLNTEV TTNQHVDRER AYNSAASLLK ILFLDESSSS GSASRKMGRI
     DGYNQASTIK KDSVFTWTDV YEDEKISLAS PAETSPDKGD ASASEAVPDV TDSKDTSESK
     RKYRKMIFGE EALKISPKEP YCLYHPIRRG HFNVSPHYSA QRVCEDLTAI LDWILLEKLH
     ITHKERFSFH AVIVVPETFD TREIKEMLTI VLGELYFNSA VVHQEGLSAV FGNGLTTACI
     VNIGAQTSTV VCVEDGVSLP NTEKILPFGG EDICRCLLWI QRHYQKWPQI NTDVLAKPID
     MLMLNQLKES FCEIRAGELE TVATVHSYEE GMPAVPHKTN LTSLNVPPMG LFYPNLLVPE
     IFPQPPRQWF QDYENMLEDT WNMDFGGGGN MGLPMWDSFA FSPSKPKKEE KIGLAEAITS
     SILSAGRIDL RRKLFSSIQL IGGAGLTKGL VAAVEERVLH AIPPTEAIDT VQVLPSRTEP
     QFVTWKGGAI LGILDFGREA WIERHQWMVN GVNKGGLKKY KDSYHLQGQA MYFINP