ID   ARP9_ORYSJ              Reviewed;         586 AA.
AC   Q0JF03; A0A0N7KIL4; A3ARJ7; Q7XNG4;
DT   26-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT   03-OCT-2006, sequence version 1.
DT   03-AUG-2022, entry version 92.
DE   RecName: Full=Actin-related protein 9;
GN   Name=ARP9; OrderedLocusNames=Os04g0177600, LOC_Os04g09860;
GN   ORFNames=OsJ_013419, OSJNBa0096F01.9;
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=12447439; DOI=10.1038/nature01183;
RA   Feng Q., Zhang Y., Hao P., Wang S., Fu G., Huang Y., Li Y., Zhu J., Liu Y.,
RA   Hu X., Jia P., Zhang Y., Zhao Q., Ying K., Yu S., Tang Y., Weng Q.,
RA   Zhang L., Lu Y., Mu J., Lu Y., Zhang L.S., Yu Z., Fan D., Liu X., Lu T.,
RA   Li C., Wu Y., Sun T., Lei H., Li T., Hu H., Guan J., Wu M., Zhang R.,
RA   Zhou B., Chen Z., Chen L., Jin Z., Wang R., Yin H., Cai Z., Ren S., Lv G.,
RA   Gu W., Zhu G., Tu Y., Jia J., Zhang Y., Chen J., Kang H., Chen X., Shao C.,
RA   Sun Y., Hu Q., Zhang X., Zhang W., Wang L., Ding C., Sheng H., Gu J.,
RA   Chen S., Ni L., Zhu F., Chen W., Lan L., Lai Y., Cheng Z., Gu M., Jiang J.,
RA   Li J., Hong G., Xue Y., Han B.;
RT   "Sequence and analysis of rice chromosome 4.";
RL   Nature 420:316-320(2002).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16100779; DOI=10.1038/nature03895;
RG   International rice genome sequencing project (IRGSP);
RT   "The map-based sequence of the rice genome.";
RL   Nature 436:793-800(2005).
RN   [3]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=18089549; DOI=10.1093/nar/gkm978;
RG   The rice annotation project (RAP);
RT   "The rice annotation project database (RAP-DB): 2008 update.";
RL   Nucleic Acids Res. 36:D1028-D1033(2008).
RN   [4]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA   Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA   Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA   Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA   Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT   "Improvement of the Oryza sativa Nipponbare reference genome using next
RT   generation sequence and optical map data.";
RL   Rice 6:4-4(2013).
RN   [5]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA   Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA   Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA   Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA   Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA   Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA   Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA   Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA   Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA   Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA   Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA   Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA   Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA   Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA   McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT   "The genomes of Oryza sativa: a history of duplications.";
RL   PLoS Biol. 3:266-281(2005).
RN   [6]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=12869764; DOI=10.1126/science.1081288;
RG   The rice full-length cDNA consortium;
RT   "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT   japonica rice.";
RL   Science 301:376-379(2003).
RN   [7]
RP   REVIEW, GENE FAMILY, AND NOMENCLATURE.
RX   PubMed=15063870; DOI=10.1016/j.tplants.2004.02.004;
RA   Kandasamy M.K., Deal R.B., McKinney E.C., Meagher R.B.;
RT   "Plant actin-related proteins.";
RL   Trends Plant Sci. 9:196-202(2004).
CC   -!- SIMILARITY: Belongs to the actin family. ARP8 subfamily. {ECO:0000305}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=CAE04100.3; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC       Sequence=CM000141; Type=Frameshift; Evidence={ECO:0000305};
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DR   EMBL; AL662933; CAE04100.3; ALT_SEQ; Genomic_DNA.
DR   EMBL; AP008210; BAF14084.1; -; Genomic_DNA.
DR   EMBL; AP014960; BAS87945.1; -; Genomic_DNA.
DR   EMBL; CM000141; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AK105285; -; NOT_ANNOTATED_CDS; mRNA.
DR   RefSeq; XP_015636662.1; XM_015781176.1.
DR   AlphaFoldDB; Q0JF03; -.
DR   SMR; Q0JF03; -.
DR   STRING; 4530.OS04T0177600-01; -.
DR   iPTMnet; Q0JF03; -.
DR   PaxDb; Q0JF03; -.
DR   PRIDE; Q0JF03; -.
DR   EnsemblPlants; Os04t0177600-02; Os04t0177600-02; Os04g0177600.
DR   GeneID; 4335089; -.
DR   Gramene; Os04t0177600-02; Os04t0177600-02; Os04g0177600.
DR   KEGG; osa:4335089; -.
DR   eggNOG; KOG0797; Eukaryota.
DR   HOGENOM; CLU_024282_0_0_1; -.
DR   InParanoid; Q0JF03; -.
DR   Proteomes; UP000000763; Chromosome 4.
DR   Proteomes; UP000007752; Chromosome 4.
DR   Proteomes; UP000059680; Chromosome 4.
DR   ExpressionAtlas; Q0JF03; baseline and differential.
DR   Genevisible; Q0JF03; OS.
DR   GO; GO:0031011; C:Ino80 complex; IBA:GO_Central.
DR   GO; GO:0006338; P:chromatin remodeling; IEA:InterPro.
DR   GO; GO:0006302; P:double-strand break repair; IBA:GO_Central.
DR   GO; GO:0006355; P:regulation of transcription, DNA-templated; IBA:GO_Central.
DR   InterPro; IPR004000; Actin.
DR   InterPro; IPR027668; Arp8/plant_Arp9.
DR   InterPro; IPR043129; ATPase_NBD.
DR   PANTHER; PTHR11937; PTHR11937; 1.
DR   PANTHER; PTHR11937:SF13; PTHR11937:SF13; 1.
DR   Pfam; PF00022; Actin; 1.
DR   SMART; SM00268; ACTIN; 1.
DR   SUPFAM; SSF53067; SSF53067; 2.
PE   2: Evidence at transcript level;
KW   Reference proteome.
FT   CHAIN           1..586
FT                   /note="Actin-related protein 9"
FT                   /id="PRO_0000320540"
FT   REGION          141..169
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   CONFLICT        284
FT                   /note="S -> L (in Ref. 6; AK105285)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   586 AA;  65837 MW;  4E6050107A212D7A CRC64;
     MDYLKTVVPS QLMAERGANL VVINPGSSNV RIGFASQDVP FNIPHCIARH ITQQKDDTPR
     LSVRDKMLNC HATPSQNAER ERAYDIIASL LKIPFLDEDM PSANQALPPK MGRVDALSSQ
     QNKDDSKFTW TDVMDRSIKS STPIVDKDAD VDPLQRSTPD DTEPNSEENM YKEIIFGEDA
     LKIPPSESYC LSHPIRRGHF NISQDYSLHQ VLEDLRTIWN WILTEKLHIN PRDRHLYSAI
     LVLGETFDNR EIKEMLSIVL CDLGFSTAVI HQEALAAAFG NGLSTSCVVN IGAQVTQVVC
     VEDGVALPHT ALALPYGGDD ISRCLLWVQR RHCTWPNFQT DPVNKPIDML MLNKLKESYS
     QIRSGSFDAV SVVHSYEHEK SVGHQKTKLS ALNVPPMGLL YPRVLVPEEY PPPPRSWFQD
     YDDMLEDTWQ TSDSLYSSGN GGFGMWDNYP MFPTRLKKFD NIGLVEAIVS SILSTGRIEL
     QRKLFCSIQL VGGTASTAGL APVLEQRVLN TIPSNQPIEK AEVLQSRSYP LFVPWKGGVI
     LGVLDIGRDA WIHREDWAKN GVHIGSGRKY RDSYFLQAQA MCYYNS