OBGM_ORYSJ
ID OBGM_ORYSJ Reviewed; 528 AA.
AC Q2QZ37; A0A0P0Y5P1;
DT 22-JAN-2014, integrated into UniProtKB/Swiss-Prot.
DT 24-JAN-2006, sequence version 1.
DT 03-AUG-2022, entry version 114.
DE RecName: Full=Probable GTP-binding protein OBGM, mitochondrial;
DE Flags: Precursor;
GN Name=OBGM; OrderedLocusNames=Os11g0704300, LOC_Os11g47800;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16188032; DOI=10.1186/1741-7007-3-20;
RG The rice chromosomes 11 and 12 sequencing consortia;
RT "The sequence of rice chromosomes 11 and 12, rich in disease resistance
RT genes and recent gene duplications.";
RL BMC Biol. 3:20-20(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
CC -!- FUNCTION: May bind GTP and have GTPase activity. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the TRAFAC class OBG-HflX-like GTPase
CC superfamily. OBG GTPase family. {ECO:0000255|PROSITE-ProRule:PRU01047}.
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DR EMBL; DP000010; ABA95505.1; -; Genomic_DNA.
DR EMBL; AP008217; BAF28906.1; -; Genomic_DNA.
DR EMBL; AP014967; BAT15398.1; -; Genomic_DNA.
DR EMBL; AK105431; BAG97244.1; -; mRNA.
DR RefSeq; XP_015615543.1; XM_015760057.1.
DR AlphaFoldDB; Q2QZ37; -.
DR SMR; Q2QZ37; -.
DR STRING; 4530.OS11T0704300-02; -.
DR PaxDb; Q2QZ37; -.
DR PRIDE; Q2QZ37; -.
DR EnsemblPlants; Os11t0704300-01; Os11t0704300-01; Os11g0704300.
DR EnsemblPlants; Os11t0704300-02; Os11t0704300-02; Os11g0704300.
DR GeneID; 4351211; -.
DR Gramene; Os11t0704300-01; Os11t0704300-01; Os11g0704300.
DR Gramene; Os11t0704300-02; Os11t0704300-02; Os11g0704300.
DR KEGG; osa:4351211; -.
DR eggNOG; KOG1489; Eukaryota.
DR HOGENOM; CLU_011747_5_0_1; -.
DR InParanoid; Q2QZ37; -.
DR OMA; PRVGHWE; -.
DR OrthoDB; 1150635at2759; -.
DR Proteomes; UP000000763; Chromosome 11.
DR Proteomes; UP000059680; Chromosome 11.
DR Genevisible; Q2QZ37; OS.
DR GO; GO:0005739; C:mitochondrion; IBA:GO_Central.
DR GO; GO:0005525; F:GTP binding; IBA:GO_Central.
DR GO; GO:0003924; F:GTPase activity; IBA:GO_Central.
DR GO; GO:0000287; F:magnesium ion binding; IEA:InterPro.
DR CDD; cd01898; Obg; 1.
DR Gene3D; 2.70.210.12; -; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR InterPro; IPR031167; G_OBG.
DR InterPro; IPR006073; GTP-bd.
DR InterPro; IPR014100; GTP-bd_Obg/CgtA.
DR InterPro; IPR006169; GTP1_OBG_dom.
DR InterPro; IPR036726; GTP1_OBG_dom_sf.
DR InterPro; IPR045086; OBG_GTPase.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR11702; PTHR11702; 2.
DR Pfam; PF01018; GTP1_OBG; 2.
DR Pfam; PF01926; MMR_HSR1; 1.
DR PIRSF; PIRSF002401; GTP_bd_Obg/CgtA; 1.
DR PRINTS; PR00326; GTP1OBG.
DR SUPFAM; SSF52540; SSF52540; 1.
DR SUPFAM; SSF82051; SSF82051; 1.
DR PROSITE; PS51710; G_OBG; 1.
DR PROSITE; PS51883; OBG; 1.
PE 2: Evidence at transcript level;
KW GTP-binding; Mitochondrion; Nucleotide-binding; Reference proteome;
KW Transit peptide.
FT TRANSIT 1..45
FT /note="Mitochondrion"
FT /evidence="ECO:0000255"
FT CHAIN 46..528
FT /note="Probable GTP-binding protein OBGM, mitochondrial"
FT /evidence="ECO:0000255"
FT /id="PRO_0000424832"
FT DOMAIN 46..339
FT /note="Obg"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01231"
FT DOMAIN 340..513
FT /note="OBG-type G"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01047"
FT REGION 52..87
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 167..212
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 170..196
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 197..212
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 346..353
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01047"
FT BINDING 393..397
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01047"
SQ SEQUENCE 528 AA; 58493 MW; 0AE2390208DF44F7 CRC64;
MWRRQHALLR RISLPKPPAA TGIGCYYATE PEGRKPKTAP LQSRGMVDRF RLRAKGGDGG
NGCISLRRSR SDRQGKPDGG NGGRGGDVIL ECSRSVWDFS GLQHHMKASR GANGVSKNQI
GTRGSDKIAQ VPVGTVIHLV EGEQPSLSVN KPTRALDPWD IPDAVEHSPF SSSRIGSKMM
KGLDSSRSSQ HISSKKNTAE NDCERGNRNH RGKEPYYMTE FVRTEDYDGT SYPHQVGVDE
NDQFDDEDDE FWEDDEEELD MEEVTEEKEE EEDVRYSVAE MTKPGQRLII ARGGEGGLGN
ACILKEMWLS KAHKEEEMAS LSTGHPGTET YLILELKSIA DVGLVGMPNA GKSTLLSALS
RARPEIADYA FTTLRPNIGS LTYEDYFSVK VADIPGLIKG AHENRGLGHA FLRHIERTKV
LAYVLDLAAT LNGRKGVPPW EQLRDLVVEL EHYQEGLTKR PSLIVANKID EEGADEMYEE
LKKRVQGVPM FPICAILQEG VPDLRVGLRD LMDASDPQGI ELSKIVVD
