OBP1A_ARATH
ID OBP1A_ARATH Reviewed; 241 AA.
AC Q9ZVY7;
DT 11-MAY-2016, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-1999, sequence version 1.
DT 03-AUG-2022, entry version 123.
DE RecName: Full=Oil body-associated protein 1A {ECO:0000303|PubMed:24406791};
GN Name=OBAP1A {ECO:0000303|PubMed:24406791};
GN OrderedLocusNames=At1g05510 {ECO:0000312|Araport:AT1G05510};
GN ORFNames=T25N20.16 {ECO:0000312|EMBL:AAF79727.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP TISSUE SPECIFICITY, DEVELOPMENTAL STAGE, DISRUPTION PHENOTYPE, SUBCELLULAR
RP LOCATION, GENE FAMILY, AND NOMENCLATURE.
RX PubMed=24406791; DOI=10.1104/pp.113.233221;
RA Lopez-Ribera I., La Paz J.L., Repiso C., Garcia N., Miquel M.,
RA Hernandez M.L., Martinez-Rivas J.M., Vicient C.M.;
RT "The evolutionary conserved oil body associated protein OBAP1 participates
RT in the regulation of oil body size.";
RL Plant Physiol. 164:1237-1249(2014).
CC -!- INTERACTION:
CC Q9ZVY7; Q9FUR2: IP5P2; NbExp=4; IntAct=EBI-4425342, EBI-25510894;
CC -!- SUBCELLULAR LOCATION: Lipid droplet {ECO:0000269|PubMed:24406791}.
CC -!- TISSUE SPECIFICITY: Expressed in seeds. Not detected in stems or mature
CC leaves. {ECO:0000269|PubMed:24406791}.
CC -!- DEVELOPMENTAL STAGE: Highly expressed during seed maturation. Decreases
CC rapidly after imbibition, becoming undetectable only 5 days after
CC imbibition. {ECO:0000269|PubMed:24406791}.
CC -!- DISRUPTION PHENOTYPE: Irregularly expanded oil-containing structures,
CC 40% reduction of triacylglycerols (TAG) content in seeds and 98%
CC decreased seed germination rate. {ECO:0000269|PubMed:24406791}.
CC -!- SIMILARITY: Belongs to the OBAP family. {ECO:0000305}.
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DR EMBL; AC005106; AAF79727.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE27847.1; -; Genomic_DNA.
DR EMBL; AY070405; AAL49901.1; -; mRNA.
DR EMBL; AY096580; AAM20230.1; -; mRNA.
DR EMBL; AK226452; BAE98594.1; -; mRNA.
DR RefSeq; NP_172042.1; NM_100430.5.
DR AlphaFoldDB; Q9ZVY7; -.
DR IntAct; Q9ZVY7; 3.
DR STRING; 3702.AT1G05510.1; -.
DR PaxDb; Q9ZVY7; -.
DR PRIDE; Q9ZVY7; -.
DR ProMEX; Q9ZVY7; -.
DR ProteomicsDB; 250857; -.
DR DNASU; 837053; -.
DR EnsemblPlants; AT1G05510.1; AT1G05510.1; AT1G05510.
DR GeneID; 837053; -.
DR Gramene; AT1G05510.1; AT1G05510.1; AT1G05510.
DR KEGG; ath:AT1G05510; -.
DR Araport; AT1G05510; -.
DR TAIR; locus:2201041; AT1G05510.
DR eggNOG; ENOG502QR3B; Eukaryota.
DR HOGENOM; CLU_071931_2_1_1; -.
DR InParanoid; Q9ZVY7; -.
DR OMA; ESRAYMK; -.
DR OrthoDB; 1369161at2759; -.
DR PhylomeDB; Q9ZVY7; -.
DR PRO; PR:Q9ZVY7; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9ZVY7; baseline and differential.
DR GO; GO:0005811; C:lipid droplet; IDA:TAIR.
DR GO; GO:0009793; P:embryo development ending in seed dormancy; IMP:TAIR.
DR GO; GO:0019915; P:lipid storage; IMP:TAIR.
DR GO; GO:0009737; P:response to abscisic acid; IEP:TAIR.
DR GO; GO:0010344; P:seed oilbody biogenesis; IMP:TAIR.
DR InterPro; IPR010686; OBAP-like.
DR PANTHER; PTHR31360; PTHR31360; 1.
DR Pfam; PF06884; DUF1264; 1.
PE 1: Evidence at protein level;
KW Lipid droplet; Reference proteome.
FT CHAIN 1..241
FT /note="Oil body-associated protein 1A"
FT /id="PRO_0000436086"
FT REGION 1..24
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 241 AA; 27293 MW; 54621320AA6A4ABD CRC64;
MEKAVHLSTK NGPKVPGEPT KTGTSMVDTA ASAVQSFAPI NQIHQHLCAF HFYAYDMTRQ
VEAHHFCGHI NEDMRQCLIY DGPDANARLI GLEYIVTEKL FMTLPDDEKK LWHTHEWEVK
GGFLFMPGVP EAIQRQDLEK VAKTYGKVYH FWQVDLGHQL PIGLPNIMMA VTRDGQLYPE
MIKETEKQFG VSIDKERESR AYMKGPDHGI HPLANGGGKG LKLELREVDI KPVESVPRVF
V
