OBP1B_ARATH
ID OBP1B_ARATH Reviewed; 241 AA.
AC Q8GWR2; Q8GXX2;
DT 11-MAY-2016, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2003, sequence version 1.
DT 03-AUG-2022, entry version 113.
DE RecName: Full=Oil body-associated protein 1B {ECO:0000303|PubMed:24406791};
GN Name=OBAP1B {ECO:0000303|PubMed:24406791};
GN OrderedLocusNames=At2g31985 {ECO:0000312|Araport:AT2G31985};
GN ORFNames=F22D22 {ECO:0000312|EMBL:AC006223};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702 {ECO:0000312|EMBL:BAC43279.1};
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=11910074; DOI=10.1126/science.1071006;
RA Seki M., Narusaka M., Kamiya A., Ishida J., Satou M., Sakurai T.,
RA Nakajima M., Enju A., Akiyama K., Oono Y., Muramatsu M., Hayashizaki Y.,
RA Kawai J., Carninci P., Itoh M., Ishii Y., Arakawa T., Shibata K.,
RA Shinagawa A., Shinozaki K.;
RT "Functional annotation of a full-length Arabidopsis cDNA collection.";
RL Science 296:141-145(2002).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [5]
RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC STRAIN=cv. Landsberg erecta;
RX PubMed=17272265; DOI=10.1074/mcp.m600408-mcp200;
RA Maor R., Jones A., Nuehse T.S., Studholme D.J., Peck S.C., Shirasu K.;
RT "Multidimensional protein identification technology (MudPIT) analysis of
RT ubiquitinated proteins in plants.";
RL Mol. Cell. Proteomics 6:601-610(2007).
RN [6]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=24406791; DOI=10.1104/pp.113.233221;
RA Lopez-Ribera I., La Paz J.L., Repiso C., Garcia N., Miquel M.,
RA Hernandez M.L., Martinez-Rivas J.M., Vicient C.M.;
RT "The evolutionary conserved oil body associated protein OBAP1 participates
RT in the regulation of oil body size.";
RL Plant Physiol. 164:1237-1249(2014).
CC -!- INTERACTION:
CC Q8GWR2; Q9C7N3: OBAP2C; NbExp=4; IntAct=EBI-4425363, EBI-4425345;
CC -!- SIMILARITY: Belongs to the OBAP family. {ECO:0000305}.
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DR EMBL; AC006223; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CP002685; AEC08618.1; -; Genomic_DNA.
DR EMBL; AK117989; BAC42624.1; -; mRNA.
DR EMBL; AK118685; BAC43279.1; -; mRNA.
DR EMBL; BT005262; AAO63326.1; -; mRNA.
DR RefSeq; NP_850179.1; NM_179848.1.
DR AlphaFoldDB; Q8GWR2; -.
DR IntAct; Q8GWR2; 5.
DR STRING; 3702.AT2G31985.1; -.
DR PaxDb; Q8GWR2; -.
DR PRIDE; Q8GWR2; -.
DR ProteomicsDB; 239075; -.
DR DNASU; 817759; -.
DR EnsemblPlants; AT2G31985.1; AT2G31985.1; AT2G31985.
DR GeneID; 817759; -.
DR Gramene; AT2G31985.1; AT2G31985.1; AT2G31985.
DR KEGG; ath:AT2G31985; -.
DR Araport; AT2G31985; -.
DR TAIR; locus:504956051; AT2G31985.
DR eggNOG; ENOG502QR3B; Eukaryota.
DR HOGENOM; CLU_071931_2_1_1; -.
DR InParanoid; Q8GWR2; -.
DR OMA; GFHFYNG; -.
DR OrthoDB; 1369161at2759; -.
DR PhylomeDB; Q8GWR2; -.
DR PRO; PR:Q8GWR2; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; Q8GWR2; baseline and differential.
DR InterPro; IPR010686; OBAP-like.
DR PANTHER; PTHR31360; PTHR31360; 1.
DR Pfam; PF06884; DUF1264; 1.
PE 1: Evidence at protein level;
KW Reference proteome.
FT CHAIN 1..241
FT /note="Oil body-associated protein 1B"
FT /id="PRO_0000436087"
FT REGION 1..22
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 28
FT /note="D -> G (in Ref. 3; BAC42624)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 241 AA; 26759 MW; 8FB8C572B9A71B7F CRC64;
MEKAVHSSTT SGPAVPGETT KTGTSIIDTA ASAVQSFAPV NQIHQHLCAF HFYADDMARQ
VEAHHFCSHV NEEMRQCLIY DGPDANARLI GLEYIVSEKL FMTLPDEEKK LWHSHEWEVK
GGFLFMPGVP GAIQRKDLDK VAKTYGKVFH FWQVDLGHEL PIGLPNVMMA VTRDGQLFHE
MIQEAEKRFG VSVEGERDSR AYMSGPELGI HPLANGGGKG MKLELREVDI KPVESVGSVF
V
