OBP2C_ARATH
ID OBP2C_ARATH Reviewed; 237 AA.
AC Q9C7N3;
DT 11-MAY-2016, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2001, sequence version 1.
DT 25-MAY-2022, entry version 118.
DE RecName: Full=Oil body-associated protein 2C {ECO:0000303|PubMed:24406791};
GN Name=OBAP2C {ECO:0000303|PubMed:24406791};
GN OrderedLocusNames=At1g29680 {ECO:0000312|Araport:AT1G29680};
GN ORFNames=F15D2.23 {ECO:0000312|EMBL:BAC42637.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=11910074; DOI=10.1126/science.1071006;
RA Seki M., Narusaka M., Kamiya A., Ishida J., Satou M., Sakurai T.,
RA Nakajima M., Enju A., Akiyama K., Oono Y., Muramatsu M., Hayashizaki Y.,
RA Kawai J., Carninci P., Itoh M., Ishii Y., Arakawa T., Shibata K.,
RA Shinagawa A., Shinozaki K.;
RT "Functional annotation of a full-length Arabidopsis cDNA collection.";
RL Science 296:141-145(2002).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [5]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=24406791; DOI=10.1104/pp.113.233221;
RA Lopez-Ribera I., La Paz J.L., Repiso C., Garcia N., Miquel M.,
RA Hernandez M.L., Martinez-Rivas J.M., Vicient C.M.;
RT "The evolutionary conserved oil body associated protein OBAP1 participates
RT in the regulation of oil body size.";
RL Plant Physiol. 164:1237-1249(2014).
CC -!- INTERACTION:
CC Q9C7N3; Q8GWR2: OBAP1B; NbExp=4; IntAct=EBI-4425345, EBI-4425363;
CC -!- SIMILARITY: Belongs to the OBAP family. {ECO:0000305}.
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DR EMBL; AC068667; AAG51759.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE31117.1; -; Genomic_DNA.
DR EMBL; AK118004; BAC42637.1; -; mRNA.
DR EMBL; BT005255; AAO63319.1; -; mRNA.
DR PIR; B86420; B86420.
DR RefSeq; NP_174261.1; NM_102708.3.
DR AlphaFoldDB; Q9C7N3; -.
DR IntAct; Q9C7N3; 3.
DR STRING; 3702.AT1G29680.1; -.
DR PaxDb; Q9C7N3; -.
DR PRIDE; Q9C7N3; -.
DR ProteomicsDB; 238992; -.
DR DNASU; 839845; -.
DR EnsemblPlants; AT1G29680.1; AT1G29680.1; AT1G29680.
DR GeneID; 839845; -.
DR Gramene; AT1G29680.1; AT1G29680.1; AT1G29680.
DR KEGG; ath:AT1G29680; -.
DR Araport; AT1G29680; -.
DR TAIR; locus:2013668; AT1G29680.
DR eggNOG; ENOG502QPUT; Eukaryota.
DR HOGENOM; CLU_071931_2_1_1; -.
DR InParanoid; Q9C7N3; -.
DR OMA; HHACSFA; -.
DR OrthoDB; 1369161at2759; -.
DR PhylomeDB; Q9C7N3; -.
DR PRO; PR:Q9C7N3; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9C7N3; baseline and differential.
DR InterPro; IPR010686; OBAP-like.
DR PANTHER; PTHR31360; PTHR31360; 1.
DR Pfam; PF06884; DUF1264; 1.
PE 1: Evidence at protein level;
KW Reference proteome.
FT CHAIN 1..237
FT /note="Oil body-associated protein 2C"
FT /id="PRO_0000436090"
SQ SEQUENCE 237 AA; 26876 MW; 759112060ACABEA5 CRC64;
MALSGGDDQV PPGGPMTVST RLIDAGSTIM QRRLPVKQMN THVSTFAIYG GDMSRLIGTH
HYVHRVNDEF LQCAVYASDR SDAPLIGIEY VISDRLYETL SEDEQKLWHS HAYEVKSGSW
AYPRLPEVVA APELKNIAKT YGKFWCTWQI DRGDKLPMGA PELMMSPQGV GQGVLRPELV
KRRDEKYNIS TDDLKHTRAE IAEPEWINPM ADYWKQHGKC FVLDIATVEM NRHAQFP
