OBP_RAT
ID OBP_RAT Reviewed; 172 AA.
AC P08937;
DT 01-NOV-1988, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1988, sequence version 1.
DT 03-AUG-2022, entry version 141.
DE RecName: Full=Odorant-binding protein;
DE Short=OBP;
DE Flags: Precursor;
GN Name=Obp1f;
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Rattus.
OX NCBI_TaxID=10116;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], AND PROTEIN SEQUENCE OF 16-31.
RX PubMed=3388043; DOI=10.1126/science.3388043;
RA Pevsner J., Reed R.R., Feinstein P.G., Snyder S.H.;
RT "Molecular cloning of odorant-binding protein: member of a ligand carrier
RT family.";
RL Science 241:336-339(1988).
RN [2]
RP X-RAY CRYSTALLOGRAPHY (1.6 ANGSTROMS) OF 17-172, AND DISULFIDE BONDS.
RX PubMed=19390145; DOI=10.1107/s090744490900420x;
RA White S.A., Briand L., Scott D.J., Borysik A.J.;
RT "Structure of rat odorant-binding protein OBP1 at 1.6 A resolution.";
RL Acta Crystallogr. D 65:403-410(2009).
CC -!- FUNCTION: This protein is found in nasal epithelium and it binds a wide
CC variety of chemical odorants.
CC -!- SUBUNIT: Homodimer.
CC -!- SUBCELLULAR LOCATION: Secreted.
CC -!- SIMILARITY: Belongs to the calycin superfamily. Lipocalin family.
CC {ECO:0000305}.
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DR EMBL; J03093; AAA41736.1; -; mRNA.
DR PIR; A28713; A28713.
DR RefSeq; NP_620258.1; NM_138903.1.
DR PDB; 3FIQ; X-ray; 1.60 A; A/B=17-172.
DR PDBsum; 3FIQ; -.
DR AlphaFoldDB; P08937; -.
DR SMR; P08937; -.
DR STRING; 10116.ENSRNOP00000064887; -.
DR PaxDb; P08937; -.
DR GeneID; 192267; -.
DR KEGG; rno:192267; -.
DR CTD; 192267; -.
DR RGD; 621639; Obp1f.
DR VEuPathDB; HostDB:ENSRNOG00000062551; -.
DR eggNOG; ENOG502TDZD; Eukaryota.
DR HOGENOM; CLU_094061_4_2_1; -.
DR InParanoid; P08937; -.
DR OMA; PLRCYNR; -.
DR OrthoDB; 1357921at2759; -.
DR TreeFam; TF338197; -.
DR EvolutionaryTrace; P08937; -.
DR PRO; PR:P08937; -.
DR Proteomes; UP000002494; Chromosome X.
DR Bgee; ENSRNOG00000049515; Expressed in liver and 2 other tissues.
DR Genevisible; P08937; RN.
DR GO; GO:0005615; C:extracellular space; IBA:GO_Central.
DR GO; GO:0005549; F:odorant binding; IDA:RGD.
DR GO; GO:0036094; F:small molecule binding; IEA:InterPro.
DR GO; GO:0050896; P:response to stimulus; IEA:UniProtKB-KW.
DR GO; GO:0007608; P:sensory perception of smell; IEA:UniProtKB-KW.
DR Gene3D; 2.40.128.20; -; 1.
DR InterPro; IPR012674; Calycin.
DR InterPro; IPR002345; Lipocalin.
DR InterPro; IPR022272; Lipocalin_CS.
DR InterPro; IPR000566; Lipocln_cytosolic_FA-bd_dom.
DR InterPro; IPR002448; OBP-like.
DR PANTHER; PTHR11430; PTHR11430; 1.
DR Pfam; PF00061; Lipocalin; 1.
DR PRINTS; PR01173; ODORANTBNDNG.
DR SUPFAM; SSF50814; SSF50814; 1.
DR PROSITE; PS00213; LIPOCALIN; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Direct protein sequencing; Disulfide bond; Olfaction;
KW Reference proteome; Secreted; Sensory transduction; Signal; Transport.
FT SIGNAL 1..15
FT /evidence="ECO:0000269|PubMed:3388043"
FT CHAIN 16..172
FT /note="Odorant-binding protein"
FT /id="PRO_0000017936"
FT DISULFID 60..64
FT /evidence="ECO:0000269|PubMed:19390145"
FT DISULFID 79..170
FT /evidence="ECO:0000269|PubMed:19390145"
FT HELIX 25..28
FT /evidence="ECO:0007829|PDB:3FIQ"
FT STRAND 33..41
FT /evidence="ECO:0007829|PDB:3FIQ"
FT HELIX 42..44
FT /evidence="ECO:0007829|PDB:3FIQ"
FT STRAND 54..60
FT /evidence="ECO:0007829|PDB:3FIQ"
FT HELIX 62..64
FT /evidence="ECO:0007829|PDB:3FIQ"
FT STRAND 66..75
FT /evidence="ECO:0007829|PDB:3FIQ"
FT STRAND 78..88
FT /evidence="ECO:0007829|PDB:3FIQ"
FT STRAND 94..109
FT /evidence="ECO:0007829|PDB:3FIQ"
FT STRAND 111..121
FT /evidence="ECO:0007829|PDB:3FIQ"
FT STRAND 127..137
FT /evidence="ECO:0007829|PDB:3FIQ"
FT HELIX 141..153
FT /evidence="ECO:0007829|PDB:3FIQ"
FT HELIX 158..160
FT /evidence="ECO:0007829|PDB:3FIQ"
FT HELIX 165..167
FT /evidence="ECO:0007829|PDB:3FIQ"
SQ SEQUENCE 172 AA; 19699 MW; 9DAFFDEF67F724DD CRC64;
MVKFLLIVLA LGVSCAHHEN LDISPSEVNG DWRTLYIVAD NVEKVAEGGS LRAYFQHMEC
GDECQELKII FNVKLDSECQ THTVVGQKHE DGRYTTDYSG RNYFHVLKKT DDIIFFHNVN
VDESGRRQCD LVAGKREDLN KAQKQELRKL AEEYNIPNEN TQHLVPTDTC NQ