ODO1_BUCBP
ID ODO1_BUCBP Reviewed; 916 AA.
AC Q89AJ7;
DT 16-JUN-2003, integrated into UniProtKB/Swiss-Prot.
DT 16-JUN-2003, sequence version 1.
DT 03-AUG-2022, entry version 106.
DE RecName: Full=Oxoglutarate dehydrogenase;
DE EC=1.2.4.2 {ECO:0000250|UniProtKB:P0AFG3};
GN Name=sucA; OrderedLocusNames=bbp_280;
OS Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Erwiniaceae; Buchnera.
OX NCBI_TaxID=224915;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bp;
RX PubMed=12522265; DOI=10.1073/pnas.0235981100;
RA van Ham R.C.H.J., Kamerbeek J., Palacios C., Rausell C., Abascal F.,
RA Bastolla U., Fernandez J.M., Jimenez L., Postigo M., Silva F.J.,
RA Tamames J., Viguera E., Latorre A., Valencia A., Moran F., Moya A.;
RT "Reductive genome evolution in Buchnera aphidicola.";
RL Proc. Natl. Acad. Sci. U.S.A. 100:581-586(2003).
CC -!- FUNCTION: E1 component of the 2-oxoglutarate dehydrogenase (OGDH)
CC complex which catalyzes the decarboxylation of 2-oxoglutarate, the
CC first step in the conversion of 2-oxoglutarate to succinyl-CoA and
CC CO(2). {ECO:0000250|UniProtKB:P0AFG3}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=(R)-N(6)-lipoyl-L-lysyl-[dihydrolipoyllysine-residue
CC succinyltransferase] + 2-oxoglutarate + H(+) = (R)-N(6)-(S(8)-
CC succinyldihydrolipoyl)-L-lysyl-[dihydrolipoyllysine-residue
CC succinyltransferase] + CO2; Xref=Rhea:RHEA:12188, Rhea:RHEA-
CC COMP:10483, Rhea:RHEA-COMP:10484, ChEBI:CHEBI:15378,
CC ChEBI:CHEBI:16526, ChEBI:CHEBI:16810, ChEBI:CHEBI:83099,
CC ChEBI:CHEBI:83120; EC=1.2.4.2;
CC Evidence={ECO:0000250|UniProtKB:P0AFG3};
CC -!- COFACTOR:
CC Name=thiamine diphosphate; Xref=ChEBI:CHEBI:58937;
CC Evidence={ECO:0000250|UniProtKB:P0AFG3};
CC -!- SUBUNIT: Homodimer. Part of the 2-oxoglutarate dehydrogenase (OGDH)
CC complex composed of E1 (2-oxoglutarate dehydrogenase), E2
CC (dihydrolipoamide succinyltransferase) and E3 (dihydrolipoamide
CC dehydrogenase); the complex contains multiple copies of the three
CC enzymatic components (E1, E2 and E3). {ECO:0000250|UniProtKB:P0AFG3}.
CC -!- SIMILARITY: Belongs to the alpha-ketoglutarate dehydrogenase family.
CC {ECO:0000305}.
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DR EMBL; AE016826; AAO27005.1; -; Genomic_DNA.
DR RefSeq; WP_011091406.1; NC_004545.1.
DR AlphaFoldDB; Q89AJ7; -.
DR SMR; Q89AJ7; -.
DR STRING; 224915.bbp_280; -.
DR PRIDE; Q89AJ7; -.
DR EnsemblBacteria; AAO27005; AAO27005; bbp_280.
DR GeneID; 56470821; -.
DR KEGG; bab:bbp_280; -.
DR eggNOG; COG0567; Bacteria.
DR HOGENOM; CLU_004709_1_0_6; -.
DR OMA; RDSYCRT; -.
DR OrthoDB; 29166at2; -.
DR Proteomes; UP000000601; Chromosome.
DR GO; GO:0004591; F:oxoglutarate dehydrogenase (succinyl-transferring) activity; IEA:UniProtKB-EC.
DR GO; GO:0030976; F:thiamine pyrophosphate binding; IEA:InterPro.
DR GO; GO:0006096; P:glycolytic process; IEA:UniProtKB-KW.
DR GO; GO:0006099; P:tricarboxylic acid cycle; IEA:InterPro.
DR Gene3D; 3.40.50.11610; -; 1.
DR InterPro; IPR032106; 2-oxogl_dehyd_N.
DR InterPro; IPR011603; 2oxoglutarate_DH_E1.
DR InterPro; IPR001017; DH_E1.
DR InterPro; IPR031717; KGD_C.
DR InterPro; IPR042179; KGD_C_sf.
DR InterPro; IPR029061; THDP-binding.
DR InterPro; IPR005475; Transketolase-like_Pyr-bd.
DR PANTHER; PTHR23152; PTHR23152; 1.
DR Pfam; PF16078; 2-oxogl_dehyd_N; 1.
DR Pfam; PF00676; E1_dh; 1.
DR Pfam; PF16870; OxoGdeHyase_C; 1.
DR Pfam; PF02779; Transket_pyr; 1.
DR PIRSF; PIRSF000157; Oxoglu_dh_E1; 1.
DR SMART; SM00861; Transket_pyr; 1.
DR SUPFAM; SSF52518; SSF52518; 2.
DR TIGRFAMs; TIGR00239; 2oxo_dh_E1; 1.
PE 3: Inferred from homology;
KW Glycolysis; Oxidoreductase; Reference proteome; Thiamine pyrophosphate.
FT CHAIN 1..916
FT /note="Oxoglutarate dehydrogenase"
FT /id="PRO_0000162189"
SQ SEQUENCE 916 AA; 106047 MW; 9421601E0BE528CB CRC64;
MYKNEFNSSW MSSFNSSYID NLYNKFLLDP TSIDNSWYIV FTELSKENYI NSTNKYLNNK
FQDSKDTIKL TIELLINIFR TLGYKFAHLN PLDTFKNDNS LSLKKFLKSS EAFRIQDSYL
VKLSQYVLDD ITTKNVYDDY KNIYCKRIGY QFMHIHNSNE MNWIKNYIET KHSNILKKKK
KIQILKHLII SEMLEKYFSS KFPSIKRFSI EGAESLIPML KEVIKYTKKF NLHKIIFGMS
HRGRLNVLAN ILDKPIKTIF NEFCENNSNN FNSGDVKYHM GFCCTKTIGL RKIILDLKSN
PSHLEVINPV VVGSSRAYID SNDNLNDENI LPIIIHGDAA ISGQGVVQEL LNMSQARGYK
VGGTIHIVVN NQIGFTTSKV KDLRTSQYCT DIAKMIDSPI FHVNADDPES VIFVTHLALN
YRFCFKKDVF INLVCYRRHG HNEIDDPSIT QPVLYSKIKN HPTTATSYYN KLLLKNIINK
SFLITYQKKI KKKLDVEYNL HNKKMSEKRL KCCSIVKADY INVSNTPINN ISQSDLTILA
KKIFSIPNNI EVHNRVFKIY KDRLKMANNE KLFDWGASEL LAYASLLNEG ISCRLSGEDV
CRGTFFHRHA VIHDQKNDSK YIPLKNIKLK QGNFYIWDSV LSEEATLAFE YGYSIDQKNT
LNVWEAQFGD FANGAQIIID QFICSGEQKW NVTCNLVMLL PHGYEGQGPE HSSARIERYL
QLSANNNIKI IIPTISSQIY HIIRKQAFSL IKKPLIIMSP KSLLRFPLAA SSLSELSNGK
FRTVIDEIDN LDTKKVQRII LCSGKIYYDL LTQRRINQQK NIVILRIEQI YPRPTKKLSA
ILYNYKDVHD YIWCQEEPCN QGAWLYHKSY LKKLLPKHSK LNYVGRSSSA SPATGYMKIH
KEQQKKIIYD ALNISD