ODPA_SOLTU
ID ODPA_SOLTU Reviewed; 391 AA.
AC P52903;
DT 01-OCT-1996, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-1996, sequence version 1.
DT 03-AUG-2022, entry version 112.
DE RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial;
DE Short=PDHE1-A;
DE EC=1.2.4.1;
DE Flags: Precursor;
OS Solanum tuberosum (Potato).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum.
OX NCBI_TaxID=4113;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=cv. Desiree; TISSUE=Leaf;
RX PubMed=7659754; DOI=10.1104/pp.108.4.1623;
RA Grof C.P., Winning B.M., Scaysbrook T.P., Hill S.A., Leaver C.J.;
RT "Mitochondrial pyruvate dehydrogenase. Molecular cloning of the E1 alpha
RT subunit and expression analysis.";
RL Plant Physiol. 108:1623-1629(1995).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. DM1-3 516 R44;
RX PubMed=21743474; DOI=10.1038/nature10158;
RG The Potato Genome Sequencing Consortium;
RT "Genome sequence and analysis of the tuber crop potato.";
RL Nature 475:189-195(2011).
RN [3]
RP PROTEIN SEQUENCE OF 27-42.
RC STRAIN=cv. Romano; TISSUE=Tuber;
RX PubMed=9729464; DOI=10.1042/bj3340571;
RA Millar A.H., Knorpp C., Leaver C.J., Hill S.A.;
RT "Plant mitochondrial pyruvate dehydrogenase complex: purification and
RT identification of catalytic components in potato.";
RL Biochem. J. 334:571-576(1998).
CC -!- FUNCTION: The pyruvate dehydrogenase complex catalyzes the overall
CC conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple
CC copies of three enzymatic components: pyruvate dehydrogenase (E1),
CC dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase
CC (E3).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=(R)-N(6)-lipoyl-L-lysyl-[dihydrolipoyllysine-residue
CC acetyltransferase] + H(+) + pyruvate = (R)-N(6)-(S(8)-
CC acetyldihydrolipoyl)-L-lysyl-[dihydrolipoyllysine-residue
CC acetyltransferase] + CO2; Xref=Rhea:RHEA:19189, Rhea:RHEA-COMP:10480,
CC Rhea:RHEA-COMP:10481, ChEBI:CHEBI:15361, ChEBI:CHEBI:15378,
CC ChEBI:CHEBI:16526, ChEBI:CHEBI:83099, ChEBI:CHEBI:83111; EC=1.2.4.1;
CC -!- COFACTOR:
CC Name=thiamine diphosphate; Xref=ChEBI:CHEBI:58937;
CC -!- ACTIVITY REGULATION: E1 activity is regulated by phosphorylation
CC (inactivation) and dephosphorylation (activation) of the alpha subunit.
CC {ECO:0000250}.
CC -!- SUBUNIT: Tetramer of 2 alpha and 2 beta subunits. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Mitochondrion matrix.
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DR EMBL; Z26949; CAA81558.1; -; mRNA.
DR PIR; T07372; T07372.
DR AlphaFoldDB; P52903; -.
DR SMR; P52903; -.
DR IntAct; P52903; 1.
DR STRING; 4113.PGSC0003DMT400058223; -.
DR iPTMnet; P52903; -.
DR ProMEX; P52903; -.
DR EnsemblPlants; PGSC0003DMT400058223; PGSC0003DMT400058223; PGSC0003DMG400022607.
DR Gramene; PGSC0003DMT400058223; PGSC0003DMT400058223; PGSC0003DMG400022607.
DR eggNOG; KOG0225; Eukaryota.
DR HOGENOM; CLU_029393_5_0_1; -.
DR InParanoid; P52903; -.
DR OMA; FGMPGVT; -.
DR BRENDA; 1.2.1.104; 5757.
DR SABIO-RK; P52903; -.
DR Proteomes; UP000011115; Unassembled WGS sequence.
DR ExpressionAtlas; P52903; baseline and differential.
DR GO; GO:0005759; C:mitochondrial matrix; IEA:UniProtKB-SubCell.
DR GO; GO:0004739; F:pyruvate dehydrogenase (acetyl-transferring) activity; IBA:GO_Central.
DR GO; GO:0006086; P:acetyl-CoA biosynthetic process from pyruvate; IBA:GO_Central.
DR GO; GO:0006096; P:glycolytic process; IEA:UniProtKB-KW.
DR InterPro; IPR001017; DH_E1.
DR InterPro; IPR017597; Pyrv_DH_E1_asu_subgrp-y.
DR InterPro; IPR029061; THDP-binding.
DR Pfam; PF00676; E1_dh; 1.
DR SUPFAM; SSF52518; SSF52518; 1.
DR TIGRFAMs; TIGR03182; PDH_E1_alph_y; 1.
PE 1: Evidence at protein level;
KW Direct protein sequencing; Glycolysis; Mitochondrion; Oxidoreductase;
KW Phosphoprotein; Pyruvate; Reference proteome; Thiamine pyrophosphate;
KW Transit peptide.
FT TRANSIT 1..26
FT /note="Mitochondrion"
FT /evidence="ECO:0000269|PubMed:9729464"
FT CHAIN 27..391
FT /note="Pyruvate dehydrogenase E1 component subunit alpha,
FT mitochondrial"
FT /id="PRO_0000020455"
FT REGION 294..313
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 391 AA; 43228 MW; F9110B374B022F0D CRC64;
MALSTSRAIN HIMKPLSAAV CATRRLSSDS TATITVETSL PFTSHNIDPP SRSVETSPKE
LMTFFKDMTE MRRMEIAADS LYKAKLIRGF CHLYDGQEAV AVGMEAAITK KDCIITAYRD
HCIFLGRGGT LVEAFAELMG RRDGCSRGKG GSMHFYKKES GFYGGHGIVG AQVPLGIGLA
FAQKYKKEDY VTFAMYGDGA ANQGQLFEAL NMAALWDLPA ILVCENNHYG MGTAEWRAAK
SPAYYKRGDY VPGLRVDGMD VFAVKQACTF AKQHALKNGP IILEMDTYRY HGHSMSDPGS
TYRTRDEISG VRQERDPVER IRSLILAHNI ATEAELKDIE KENRKVVDEA IAKAKESPMP
DPSELFTNVY VKGFGVEAYG ADRKELRATL P