ODPB_RICBR
ID ODPB_RICBR Reviewed; 325 AA.
AC Q1RJX3;
DT 29-MAY-2007, integrated into UniProtKB/Swiss-Prot.
DT 16-MAY-2006, sequence version 1.
DT 03-AUG-2022, entry version 93.
DE RecName: Full=Pyruvate dehydrogenase E1 component subunit beta;
DE EC=1.2.4.1;
GN Name=pdhB; OrderedLocusNames=RBE_0260;
OS Rickettsia bellii (strain RML369-C).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales;
OC Rickettsiaceae; Rickettsieae; Rickettsia; belli group.
OX NCBI_TaxID=336407;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=RML369-C;
RX PubMed=16703114; DOI=10.1371/journal.pgen.0020076;
RA Ogata H., La Scola B., Audic S., Renesto P., Blanc G., Robert C.,
RA Fournier P.-E., Claverie J.-M., Raoult D.;
RT "Genome sequence of Rickettsia bellii illuminates the role of amoebae in
RT gene exchanges between intracellular pathogens.";
RL PLoS Genet. 2:733-744(2006).
CC -!- FUNCTION: The pyruvate dehydrogenase complex catalyzes the overall
CC conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple
CC copies of three enzymatic components: pyruvate dehydrogenase (E1),
CC dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase
CC (E3) (By similarity). {ECO:0000250}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=(R)-N(6)-lipoyl-L-lysyl-[dihydrolipoyllysine-residue
CC acetyltransferase] + H(+) + pyruvate = (R)-N(6)-(S(8)-
CC acetyldihydrolipoyl)-L-lysyl-[dihydrolipoyllysine-residue
CC acetyltransferase] + CO2; Xref=Rhea:RHEA:19189, Rhea:RHEA-COMP:10480,
CC Rhea:RHEA-COMP:10481, ChEBI:CHEBI:15361, ChEBI:CHEBI:15378,
CC ChEBI:CHEBI:16526, ChEBI:CHEBI:83099, ChEBI:CHEBI:83111; EC=1.2.4.1;
CC -!- COFACTOR:
CC Name=thiamine diphosphate; Xref=ChEBI:CHEBI:58937;
CC Evidence={ECO:0000250};
CC -!- SUBUNIT: Heterodimer of an alpha and a beta chain.
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DR EMBL; CP000087; ABE04341.1; -; Genomic_DNA.
DR RefSeq; WP_011476953.1; NC_007940.1.
DR AlphaFoldDB; Q1RJX3; -.
DR SMR; Q1RJX3; -.
DR STRING; 336407.RBE_0260; -.
DR EnsemblBacteria; ABE04341; ABE04341; RBE_0260.
DR KEGG; rbe:RBE_0260; -.
DR eggNOG; COG0022; Bacteria.
DR HOGENOM; CLU_012907_1_1_5; -.
DR OMA; SRMRHHC; -.
DR OrthoDB; 900125at2; -.
DR Proteomes; UP000001951; Chromosome.
DR GO; GO:0004739; F:pyruvate dehydrogenase (acetyl-transferring) activity; IEA:UniProtKB-EC.
DR GO; GO:0006086; P:acetyl-CoA biosynthetic process from pyruvate; IEA:InterPro.
DR GO; GO:0006096; P:glycolytic process; IEA:UniProtKB-KW.
DR Gene3D; 3.40.50.920; -; 1.
DR InterPro; IPR027110; PDHB.
DR InterPro; IPR029061; THDP-binding.
DR InterPro; IPR009014; Transketo_C/PFOR_II.
DR InterPro; IPR005475; Transketolase-like_Pyr-bd.
DR InterPro; IPR033248; Transketolase_C.
DR PANTHER; PTHR11624; PTHR11624; 1.
DR Pfam; PF02779; Transket_pyr; 1.
DR Pfam; PF02780; Transketolase_C; 1.
DR SMART; SM00861; Transket_pyr; 1.
DR SUPFAM; SSF52518; SSF52518; 1.
DR SUPFAM; SSF52922; SSF52922; 1.
PE 3: Inferred from homology;
KW Glycolysis; Oxidoreductase; Pyruvate; Thiamine pyrophosphate.
FT CHAIN 1..325
FT /note="Pyruvate dehydrogenase E1 component subunit beta"
FT /id="PRO_0000288760"
FT BINDING 59
FT /ligand="thiamine diphosphate"
FT /ligand_id="ChEBI:CHEBI:58937"
FT /evidence="ECO:0000250"
SQ SEQUENCE 325 AA; 35708 MW; 89AC46026246C64B CRC64;
MQITVREALR DAMQEEMIRD DKVFVMGEEV AEYQGAYKVT QGLLEQFGPK RVIDTPITEY
GFAGLAVGAA FAGLRPIVEF MTFNFAMQAM DHIVNSAAKT HYMSGGQVRC PIVFRGPNGA
ASRVAAQHSQ NYAACYSYIP GLKVVAPYSA EDHKGLMITA IRDDNPVIFL ENEILYGHSF
DISENVEPIP FGKAKVLKEG DSVTIVTFSI QVKLALDAAN ILQSDNINCE VIDLRTIKPL
DIDTIIESVK KTGRLVVIEE GWFFAGIGAT IAAIVMKEAF DYLDAPVEIV SGKDVPLPYA
VNLEKLALPS EYDVINAVKK VCYIK