OGFD3_RAT
ID OGFD3_RAT Reviewed; 315 AA.
AC Q5M843;
DT 18-MAR-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-2005, sequence version 1.
DT 03-AUG-2022, entry version 101.
DE RecName: Full=2-oxoglutarate and iron-dependent oxygenase domain-containing protein 3;
DE EC=1.14.11.-;
GN Name=Ogfod3;
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Rattus.
OX NCBI_TaxID=10116;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Liver;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
CC -!- COFACTOR:
CC Name=Fe(2+); Xref=ChEBI:CHEBI:29033;
CC Evidence={ECO:0000255|PROSITE-ProRule:PRU00805};
CC Note=Binds 1 Fe(2+) ion per subunit. {ECO:0000255|PROSITE-
CC ProRule:PRU00805};
CC -!- COFACTOR:
CC Name=L-ascorbate; Xref=ChEBI:CHEBI:38290; Evidence={ECO:0000250};
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Single-pass type II
CC membrane protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the OGFOD3 family. {ECO:0000305}.
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DR EMBL; BC088238; AAH88238.1; -; mRNA.
DR RefSeq; NP_001013998.1; NM_001013976.1.
DR AlphaFoldDB; Q5M843; -.
DR SMR; Q5M843; -.
DR IntAct; Q5M843; 1.
DR STRING; 10116.ENSRNOP00000051808; -.
DR GlyGen; Q5M843; 2 sites.
DR PhosphoSitePlus; Q5M843; -.
DR PaxDb; Q5M843; -.
DR PRIDE; Q5M843; -.
DR Ensembl; ENSRNOT00000054925; ENSRNOP00000051808; ENSRNOG00000036668.
DR GeneID; 303749; -.
DR KEGG; rno:303749; -.
DR CTD; 79701; -.
DR RGD; 1305007; Ogfod3.
DR eggNOG; ENOG502QR2P; Eukaryota.
DR GeneTree; ENSGT00390000005895; -.
DR HOGENOM; CLU_042482_0_0_1; -.
DR InParanoid; Q5M843; -.
DR OMA; RVEKVLW; -.
DR OrthoDB; 674380at2759; -.
DR PhylomeDB; Q5M843; -.
DR TreeFam; TF329031; -.
DR PRO; PR:Q5M843; -.
DR Proteomes; UP000002494; Chromosome 10.
DR Bgee; ENSRNOG00000036668; Expressed in ovary and 19 other tissues.
DR Genevisible; Q5M843; RN.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0051213; F:dioxygenase activity; IEA:UniProtKB-KW.
DR GO; GO:0005506; F:iron ion binding; IEA:InterPro.
DR GO; GO:0031418; F:L-ascorbic acid binding; IEA:UniProtKB-KW.
DR GO; GO:0016705; F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; IEA:InterPro.
DR InterPro; IPR039210; OGFOD3.
DR InterPro; IPR005123; Oxoglu/Fe-dep_dioxygenase.
DR InterPro; IPR006620; Pro_4_hyd_alph.
DR InterPro; IPR044862; Pro_4_hyd_alph_FE2OG_OXY.
DR PANTHER; PTHR14650; PTHR14650; 1.
DR Pfam; PF13640; 2OG-FeII_Oxy_3; 1.
DR SMART; SM00702; P4Hc; 1.
DR PROSITE; PS51471; FE2OG_OXY; 1.
PE 2: Evidence at transcript level;
KW Dioxygenase; Glycoprotein; Iron; Membrane; Metal-binding; Oxidoreductase;
KW Reference proteome; Signal-anchor; Transmembrane; Transmembrane helix;
KW Vitamin C.
FT CHAIN 1..315
FT /note="2-oxoglutarate and iron-dependent oxygenase domain-
FT containing protein 3"
FT /id="PRO_0000325887"
FT TOPO_DOM 1..41
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 42..62
FT /note="Helical; Signal-anchor for type II membrane protein"
FT /evidence="ECO:0000255"
FT TOPO_DOM 63..315
FT /note="Lumenal"
FT /evidence="ECO:0000255"
FT DOMAIN 203..305
FT /note="Fe2OG dioxygenase"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00805"
FT REGION 1..32
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 15..32
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT ACT_SITE 294
FT /evidence="ECO:0000255"
FT BINDING 226
FT /ligand="Fe cation"
FT /ligand_id="ChEBI:CHEBI:24875"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00805"
FT BINDING 228
FT /ligand="Fe cation"
FT /ligand_id="ChEBI:CHEBI:24875"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00805"
FT BINDING 284
FT /ligand="Fe cation"
FT /ligand_id="ChEBI:CHEBI:24875"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00805"
FT BINDING 294
FT /ligand="2-oxoglutarate"
FT /ligand_id="ChEBI:CHEBI:16810"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00805"
FT CARBOHYD 211
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 263
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 315 AA; 35385 MW; 7589FB5F286CD89D CRC64;
MAPQRRGPPR VPEGNSAAER RHANSTKKDR LPQEAQRTWL RIVALGVSLA LVTFLLWSSA
GIDDDVAEVV AHRGEVLEGR FIEVPCSEDY DGHRRFEGCT PRKCGRGVTD IVITREEAEQ
IRRIAEKGLS LGGSDGGASI LDLHSGALSV GKHFVNLYRY FGDKIQTIFS EEDFQLYRDI
RQKVQLTIAE AFGIRASLLY LTKPTFFSRI NSTEAQTAHD EYWHAHVDKV TYGSFDYTSL
LYLSDYLEDF GGGRFVFMEE GSNKTVEPRA GRVSFFTSGS ENLHRVEKVL WGTRYAITIA
FTCNPDHGIE DPVLT