位置:首页 > 蛋白库 > OGL_DICD3
OGL_DICD3
ID   OGL_DICD3               Reviewed;         388 AA.
AC   P21258; E0SDE7;
DT   01-MAY-1991, integrated into UniProtKB/Swiss-Prot.
DT   30-NOV-2010, sequence version 2.
DT   03-AUG-2022, entry version 91.
DE   RecName: Full=Oligogalacturonate lyase;
DE            EC=4.2.2.6;
GN   Name=ogl; OrderedLocusNames=Dda3937_03686;
OS   Dickeya dadantii (strain 3937) (Erwinia chrysanthemi (strain 3937)).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC   Pectobacteriaceae; Dickeya.
OX   NCBI_TaxID=198628;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC   STRAIN=3937;
RX   PubMed=2695393; DOI=10.1016/0378-1119(89)90472-1;
RA   Reverchon S., Huang Y., Bourson C., Robert-Baudouy J.;
RT   "Nucleotide sequences of the Erwinia chrysanthemi ogl and pelE genes
RT   negatively regulated by the kdgR gene product.";
RL   Gene 85:125-134(1989).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=3937;
RX   PubMed=21217001; DOI=10.1128/jb.01513-10;
RA   Glasner J.D., Yang C.H., Reverchon S., Hugouvieux-Cotte-Pattat N.,
RA   Condemine G., Bohin J.P., Van Gijsegem F., Yang S., Franza T., Expert D.,
RA   Plunkett G. III, San Francisco M.J., Charkowski A.O., Py B., Bell K.,
RA   Rauscher L., Rodriguez-Palenzuela P., Toussaint A., Holeva M.C., He S.Y.,
RA   Douet V., Boccara M., Blanco C., Toth I., Anderson B.D., Biehl B.S.,
RA   Mau B., Flynn S.M., Barras F., Lindeberg M., Birch P.R., Tsuyumu S.,
RA   Shi X., Hibbing M., Yap M.N., Carpentier M., Dassa E., Umehara M.,
RA   Kim J.F., Rusch M., Soni P., Mayhew G.F., Fouts D.E., Gill S.R.,
RA   Blattner F.R., Keen N.T., Perna N.T.;
RT   "Genome sequence of the plant-pathogenic bacterium Dickeya dadantii 3937.";
RL   J. Bacteriol. 193:2076-2077(2011).
CC   -!- FUNCTION: Involved in degradation of pectin, which causes soft-rod
CC       disease in plants.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=4-(4-deoxy-alpha-D-galact-4-enuronosyl)-D-galacturonate = 2 5-
CC         dehydro-4-deoxy-D-glucuronate; Xref=Rhea:RHEA:20269,
CC         ChEBI:CHEBI:17117, ChEBI:CHEBI:60189; EC=4.2.2.6;
CC   -!- PATHWAY: Glycan metabolism; pectin degradation; 2-dehydro-3-deoxy-D-
CC       gluconate from pectin: step 3/5.
CC   -!- SUBCELLULAR LOCATION: Periplasm {ECO:0000305}.
CC   -!- INDUCTION: By galacturonate and polygalacturonate, and subjected to
CC       catabolite repression.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; M33583; AAA24825.1; -; Genomic_DNA.
DR   EMBL; CP002038; ADM98639.1; -; Genomic_DNA.
DR   PIR; JQ0189; JQ0189.
DR   RefSeq; WP_013318086.1; NC_014500.1.
DR   AlphaFoldDB; P21258; -.
DR   SMR; P21258; -.
DR   STRING; 198628.Dda3937_03686; -.
DR   CAZy; PL22; Polysaccharide Lyase Family 22.
DR   PRIDE; P21258; -.
DR   EnsemblBacteria; ADM98639; ADM98639; Dda3937_03686.
DR   GeneID; 9733874; -.
DR   KEGG; ddd:Dda3937_03686; -.
DR   PATRIC; fig|198628.6.peg.2418; -.
DR   eggNOG; COG0823; Bacteria.
DR   HOGENOM; CLU_057268_0_0_6; -.
DR   OMA; WLVNEDG; -.
DR   OrthoDB; 821953at2; -.
DR   BioCyc; DDAD198628:DDA3937_RS11450-MON; -.
DR   BioCyc; MetaCyc:MON-15657; -.
DR   UniPathway; UPA00545; UER00825.
DR   Proteomes; UP000006859; Chromosome.
DR   GO; GO:0042597; C:periplasmic space; IEA:UniProtKB-SubCell.
DR   GO; GO:0047487; F:oligogalacturonide lyase activity; IDA:ASAP.
DR   GO; GO:0045490; P:pectin catabolic process; IDA:ASAP.
DR   Gene3D; 2.130.10.10; -; 1.
DR   InterPro; IPR027946; Ogl_dom.
DR   InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR   Pfam; PF14583; Pectate_lyase22; 1.
PE   2: Evidence at transcript level;
KW   Lyase; Periplasm; Reference proteome.
FT   CHAIN           1..388
FT                   /note="Oligogalacturonate lyase"
FT                   /id="PRO_0000058034"
FT   CONFLICT        316
FT                   /note="I -> T (in Ref. 1; AAA24825)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   388 AA;  44186 MW;  6E0C73737E32A089 CRC64;
     MAKGKKLSFS FHTYQDSVTG TEVVRLTPPD VICHRNYFYQ KCFSNDGSKL LFGGAFDGPW
     NYYLLDLKTQ QATQLTEGTG DNTFGGFLSP DDDALYYVKN VRNLMRVDLN TLEETNIYQV
     PDDWVGYGTW VANSDCTKMV GIEIKKEDWK PLTDWKKFQE FYFTNPCCRL IRIDLKTGEA
     TTILKENQWL GHPIYRPGDD NTVAFCHEGP HDLVDARMWF INEDGSNMRK VKEHAPGESC
     THEFWVPNGS ALAYVSYLKG STNRFICSVD PVTLENRQLT EMPPCSHLMS NYDGTLMVGD
     GCNAPVDVKD DGGYKIENDP FLYVFNMKTG KHFQVAQHNT SWEVLEGDRQ VTHPHPSFTP
     DDKHILFTSD VDGKPALYLA KVPDSVWQ
 
 
维奥蛋白资源库 - 中文蛋白资源 CopyRight © 2010-2024