OGL_PECAS
ID OGL_PECAS Reviewed; 388 AA.
AC Q59418; Q6D4G4;
DT 01-NOV-1997, integrated into UniProtKB/Swiss-Prot.
DT 18-APR-2006, sequence version 2.
DT 25-MAY-2022, entry version 105.
DE RecName: Full=Oligogalacturonide lyase;
DE EC=4.2.2.6;
GN Name=ogl; OrderedLocusNames=ECA2426;
OS Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) (Erwinia
OS carotovora subsp. atroseptica).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Pectobacteriaceae; Pectobacterium.
OX NCBI_TaxID=218491;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=C17;
RA Weber J., Olsen O.;
RL Submitted (FEB-1994) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SCRI 1043 / ATCC BAA-672;
RX PubMed=15263089; DOI=10.1073/pnas.0402424101;
RA Bell K.S., Sebaihia M., Pritchard L., Holden M.T.G., Hyman L.J.,
RA Holeva M.C., Thomson N.R., Bentley S.D., Churcher L.J.C., Mungall K.,
RA Atkin R., Bason N., Brooks K., Chillingworth T., Clark K., Doggett J.,
RA Fraser A., Hance Z., Hauser H., Jagels K., Moule S., Norbertczak H.,
RA Ormond D., Price C., Quail M.A., Sanders M., Walker D., Whitehead S.,
RA Salmond G.P.C., Birch P.R.J., Parkhill J., Toth I.K.;
RT "Genome sequence of the enterobacterial phytopathogen Erwinia carotovora
RT subsp. atroseptica and characterization of virulence factors.";
RL Proc. Natl. Acad. Sci. U.S.A. 101:11105-11110(2004).
CC -!- FUNCTION: Involved in degradation of pectin, which causes soft-rod
CC disease in plants.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=4-(4-deoxy-alpha-D-galact-4-enuronosyl)-D-galacturonate = 2 5-
CC dehydro-4-deoxy-D-glucuronate; Xref=Rhea:RHEA:20269,
CC ChEBI:CHEBI:17117, ChEBI:CHEBI:60189; EC=4.2.2.6;
CC -!- PATHWAY: Glycan metabolism; pectin degradation; 2-dehydro-3-deoxy-D-
CC gluconate from pectin: step 3/5.
CC -!- SUBCELLULAR LOCATION: Periplasm {ECO:0000305}.
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DR EMBL; X77391; CAA54566.1; -; Genomic_DNA.
DR EMBL; BX950851; CAG75329.1; -; Genomic_DNA.
DR PIR; S41940; S41940.
DR RefSeq; WP_011093978.1; NC_004547.2.
DR AlphaFoldDB; Q59418; -.
DR SMR; Q59418; -.
DR STRING; 218491.ECA2426; -.
DR CAZy; PL22; Polysaccharide Lyase Family 22.
DR DNASU; 2883542; -.
DR EnsemblBacteria; CAG75329; CAG75329; ECA2426.
DR GeneID; 57208858; -.
DR KEGG; eca:ECA2426; -.
DR PATRIC; fig|218491.5.peg.2457; -.
DR eggNOG; COG0823; Bacteria.
DR HOGENOM; CLU_057268_0_0_6; -.
DR OMA; WLVNEDG; -.
DR OrthoDB; 821953at2; -.
DR UniPathway; UPA00545; UER00825.
DR Proteomes; UP000007966; Chromosome.
DR GO; GO:0042597; C:periplasmic space; IEA:UniProtKB-SubCell.
DR GO; GO:0047487; F:oligogalacturonide lyase activity; IEA:UniProtKB-EC.
DR GO; GO:0045490; P:pectin catabolic process; IEA:UniProtKB-UniPathway.
DR Gene3D; 2.130.10.10; -; 1.
DR InterPro; IPR027946; Ogl_dom.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR Pfam; PF14583; Pectate_lyase22; 1.
PE 4: Predicted;
KW Lyase; Periplasm; Reference proteome.
FT CHAIN 1..388
FT /note="Oligogalacturonide lyase"
FT /id="PRO_0000058033"
FT CONFLICT 17
FT /note="A -> S (in Ref. 1; CAA54566)"
FT /evidence="ECO:0000305"
FT CONFLICT 71
FT /note="N -> S (in Ref. 1; CAA54566)"
FT /evidence="ECO:0000305"
FT CONFLICT 110
FT /note="T -> A (in Ref. 1; CAA54566)"
FT /evidence="ECO:0000305"
FT CONFLICT 141
FT /note="G -> S (in Ref. 1; CAA54566)"
FT /evidence="ECO:0000305"
FT CONFLICT 176
FT /note="V -> I (in Ref. 1; CAA54566)"
FT /evidence="ECO:0000305"
FT CONFLICT 304
FT /note="A -> V (in Ref. 1; CAA54566)"
FT /evidence="ECO:0000305"
FT CONFLICT 343
FT /note="E -> D (in Ref. 1; CAA54566)"
FT /evidence="ECO:0000305"
FT CONFLICT 388
FT /note="N -> H (in Ref. 1; CAA54566)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 388 AA; 44457 MW; 8325C4278EA7AAA4 CRC64;
MAKGNKIPLT FHTYQDAATG TEVVRLTPPD VICHRNYFYQ KCFFNDGSKL LFGAAFDGPW
NYYLLDLKEQ NATQLTEGKG DNTFGGFLSP NDDALYYVKN TRNLMRVDLT TLEEKTIYQV
PDDWVGYGTW VANSDCTKMV GIEIKKEDWK PLTDWKKFQE FYFTNPCCRL IRVDLVTGEA
ETILQENQWL GHPIYRPGDD NTVAFCHEGP HDLVDARMWF INEDGTNMRK VKEHAEGESC
THEFWVPDGS AMIYVSYLKD DTNRYIRSID PVTLEDRQLR VMPPCSHLMS NYDGTLLVGD
GSDAPVDVQD DGGYKIENDP FLYVFNLKTG KEHRIAQHNT SWEVLEGDRQ VTHPHPSFTP
DNKQVLFTSD VDGKPALYLA KVPDSVWN