OIAT_XANP2
ID OIAT_XANP2 Reviewed; 414 AA.
AC A7IJG7;
DT 16-JAN-2019, integrated into UniProtKB/Swiss-Prot.
DT 11-SEP-2007, sequence version 1.
DT 03-AUG-2022, entry version 70.
DE RecName: Full=3-oxo-isoapionate-4-phosphate transcarboxylase/hydrolase {ECO:0000303|PubMed:29867142};
DE EC=3.7.1.- {ECO:0000269|PubMed:29867142};
GN Name=oiaT {ECO:0000303|PubMed:29867142};
GN OrderedLocusNames=Xaut_2924 {ECO:0000312|EMBL:ABS68160.1};
OS Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
OC Xanthobacteraceae; Xanthobacter.
OX NCBI_TaxID=78245;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-1158 / Py2;
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Hammon N.,
RA Israni S., Dalin E., Tice H., Pitluck S., Sims D., Brettin T., Bruce D.,
RA Detter J.C., Han C., Tapia R., Brainard J., Schmutz J., Larimer F.,
RA Land M., Hauser L., Kyrpides N., Kim E., Ensigns S.A., Richardson P.;
RT "Complete sequence of chromosome of Xanthobacter autotrophicus Py2.";
RL Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP FUNCTION, CATALYTIC ACTIVITY, AND PATHWAY.
RX PubMed=29867142; DOI=10.1038/s41589-018-0067-7;
RA Carter M.S., Zhang X., Huang H., Bouvier J.T., Francisco B.S.,
RA Vetting M.W., Al-Obaidi N., Bonanno J.B., Ghosh A., Zallot R.G.,
RA Andersen H.M., Almo S.C., Gerlt J.A.;
RT "Functional assignment of multiple catabolic pathways for D-apiose.";
RL Nat. Chem. Biol. 14:696-705(2018).
CC -!- FUNCTION: Involved in catabolism of D-apiose. Catalyzes the conversion
CC of 3-oxo-isoapionate 4-phosphate to 3-phosphoglycerate and glycolate.
CC {ECO:0000269|PubMed:29867142}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=3-oxoisoapionate 4-phosphate + H2O = (2R)-3-phosphoglycerate +
CC glycolate + H(+); Xref=Rhea:RHEA:57076, ChEBI:CHEBI:15377,
CC ChEBI:CHEBI:15378, ChEBI:CHEBI:29805, ChEBI:CHEBI:58272,
CC ChEBI:CHEBI:141357; Evidence={ECO:0000269|PubMed:29867142};
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC Evidence={ECO:0000250|UniProtKB:O93627};
CC -!- PATHWAY: Carbohydrate metabolism. {ECO:0000269|PubMed:29867142}.
CC -!- SIMILARITY: Belongs to the RuBisCO large chain family. {ECO:0000305}.
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DR EMBL; CP000781; ABS68160.1; -; Genomic_DNA.
DR RefSeq; WP_012114910.1; NC_009720.1.
DR AlphaFoldDB; A7IJG7; -.
DR SMR; A7IJG7; -.
DR STRING; 78245.Xaut_2924; -.
DR EnsemblBacteria; ABS68160; ABS68160; Xaut_2924.
DR KEGG; xau:Xaut_2924; -.
DR eggNOG; COG1850; Bacteria.
DR HOGENOM; CLU_031450_3_0_5; -.
DR OMA; ATYWMET; -.
DR OrthoDB; 848380at2; -.
DR PhylomeDB; A7IJG7; -.
DR BioCyc; MetaCyc:MON-20969; -.
DR BRENDA; 3.7.1.28; 1641.
DR Proteomes; UP000002417; Chromosome.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0000287; F:magnesium ion binding; IEA:InterPro.
DR GO; GO:0016984; F:ribulose-bisphosphate carboxylase activity; IEA:InterPro.
DR GO; GO:0005975; P:carbohydrate metabolic process; IEA:UniProtKB-KW.
DR GO; GO:0015977; P:carbon fixation; IEA:InterPro.
DR Gene3D; 3.20.20.110; -; 1.
DR Gene3D; 3.30.70.150; -; 1.
DR InterPro; IPR033966; RuBisCO.
DR InterPro; IPR000685; RuBisCO_lsu_C.
DR InterPro; IPR036376; RuBisCO_lsu_C_sf.
DR InterPro; IPR017443; RuBisCO_lsu_fd_N.
DR InterPro; IPR036422; RuBisCO_lsu_N_sf.
DR PANTHER; PTHR42704; PTHR42704; 1.
DR Pfam; PF00016; RuBisCO_large; 1.
DR Pfam; PF02788; RuBisCO_large_N; 1.
DR SFLD; SFLDS00014; RuBisCO; 1.
DR SUPFAM; SSF51649; SSF51649; 1.
DR SUPFAM; SSF54966; SSF54966; 1.
PE 1: Evidence at protein level;
KW Carbohydrate metabolism; Hydrolase; Magnesium; Metal-binding;
KW Reference proteome.
FT CHAIN 1..414
FT /note="3-oxo-isoapionate-4-phosphate
FT transcarboxylase/hydrolase"
FT /id="PRO_0000446042"
FT BINDING 180
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /note="via carbamate group"
FT /evidence="ECO:0000250|UniProtKB:O93627"
FT BINDING 182
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /evidence="ECO:0000250|UniProtKB:O93627"
FT BINDING 183
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /evidence="ECO:0000250|UniProtKB:O93627"
FT MOD_RES 180
FT /note="N6-carboxylysine"
FT /evidence="ECO:0000250|UniProtKB:O93627"
SQ SEQUENCE 414 AA; 44329 MW; FB254C926BBD27C2 CRC64;
MSERVYATYW METGGDPART AEVIAGEQSS GTFVALATET AELKERSGAR VERLDILDTA
DIPSLPGGMA SDRYTRAILE LSWPVENFGP SLPNLMSTIA GNLFELHQVS GLRLIDLKLP
PSFTNAFAGP AFGIAGTRKL AGVAQGPIIG TIIKPSIGLT PEETAQQVRE LIAGDIDFIK
DDELQADGAR CPFEARVKAV MRVVNDAADR RGRKVMVAFN ITGDLDEMRR RHDLVLAEGG
TCVMVCLNSI GLVGVREIRR HTQLPIHGHR AGWGYLYRCP SLGWDYAPWQ QLWRLAGVDH
LHVNGLDNKF SEANASVIAA ARAVLSPLNH AAPMGAMPVF SSGQTGRQAA ETYAAIGCAD
LIHTAGGGIF GHPAGVPAGV EALRAAWRAA MAGASLEDEA TRSPALRSAL GFWR