ART1_ORYSJ
ID ART1_ORYSJ Reviewed; 465 AA.
AC Q2QX40; A0A0P0Y7G4;
DT 08-MAR-2011, integrated into UniProtKB/Swiss-Prot.
DT 24-JAN-2006, sequence version 1.
DT 03-AUG-2022, entry version 103.
DE RecName: Full=Zinc finger protein STAR3;
DE AltName: Full=Protein ALUMINUM RESISTANCE TRANSCRIPTION FACTOR 1;
DE Short=Protein ART1;
DE AltName: Full=Protein SENSITIVE TO ALUMINUM RHIZOTOXICITY 3;
GN Name=STAR3; OrderedLocusNames=Os12g0170400, LOC_Os12g07280;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, SUBCELLULAR LOCATION, TISSUE
RP SPECIFICITY, AND DISRUPTION PHENOTYPE.
RC STRAIN=cv. Koshihikari;
RX PubMed=19880795; DOI=10.1105/tpc.109.070771;
RA Yamaji N., Huang C.F., Nagao S., Yano M., Sato Y., Nagamura Y., Ma J.F.;
RT "A zinc finger transcription factor ART1 regulates multiple genes
RT implicated in aluminum tolerance in rice.";
RL Plant Cell 21:3339-3349(2009).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16188032; DOI=10.1186/1741-7007-3-20;
RG The rice chromosomes 11 and 12 sequencing consortia;
RT "The sequence of rice chromosomes 11 and 12, rich in disease resistance
RT genes and recent gene duplications.";
RL BMC Biol. 3:20-20(2005).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [5]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
CC -!- FUNCTION: Transcriptional activator that regulates the expression of
CC genes involved in aluminum (Al) tolerance. Binds to the promoter of
CC STAR1 and regulates transcript expression of STAR1 STAR2 and ART1
CC required for Al tolerance. {ECO:0000269|PubMed:19880795}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:19880795}.
CC -!- TISSUE SPECIFICITY: Expressed in roots. {ECO:0000269|PubMed:19880795}.
CC -!- DISRUPTION PHENOTYPE: No visible phenotype under normal growth
CC condition, but strong inhibition of root elongation when grown in the
CC presence of Al or on acidic soil. {ECO:0000269|PubMed:19880795}.
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DR EMBL; AB379846; BAI52855.1; -; mRNA.
DR EMBL; DP000011; ABA96557.1; -; Genomic_DNA.
DR EMBL; AP008218; BAF29290.1; -; Genomic_DNA.
DR EMBL; AP014968; BAT16068.1; -; Genomic_DNA.
DR RefSeq; XP_015620753.1; XM_015765267.1.
DR AlphaFoldDB; Q2QX40; -.
DR STRING; 4530.OS12T0170400-01; -.
DR PaxDb; Q2QX40; -.
DR PRIDE; Q2QX40; -.
DR EnsemblPlants; Os12t0170400-01; Os12t0170400-01; Os12g0170400.
DR GeneID; 4351624; -.
DR Gramene; Os12t0170400-01; Os12t0170400-01; Os12g0170400.
DR KEGG; osa:4351624; -.
DR eggNOG; KOG1721; Eukaryota.
DR HOGENOM; CLU_029078_0_0_1; -.
DR InParanoid; Q2QX40; -.
DR OrthoDB; 1318335at2759; -.
DR Proteomes; UP000000763; Chromosome 12.
DR Proteomes; UP000059680; Chromosome 12.
DR Genevisible; Q2QX40; OS.
DR GO; GO:0005634; C:nucleus; IDA:UniProtKB.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0045893; P:positive regulation of transcription, DNA-templated; IDA:UniProtKB.
DR GO; GO:0043620; P:regulation of DNA-templated transcription in response to stress; IMP:UniProtKB.
DR GO; GO:0010447; P:response to acidic pH; IEA:InterPro.
DR GO; GO:0010044; P:response to aluminum ion; IMP:UniProtKB.
DR InterPro; IPR044300; STOP1/2.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR InterPro; IPR013087; Znf_C2H2_type.
DR PANTHER; PTHR46352; PTHR46352; 1.
DR Pfam; PF00096; zf-C2H2; 1.
DR SMART; SM00355; ZnF_C2H2; 3.
DR SUPFAM; SSF57667; SSF57667; 1.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 1.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 1.
PE 2: Evidence at transcript level;
KW Activator; Metal-binding; Nucleus; Reference proteome; Repeat;
KW Transcription; Transcription regulation; Zinc; Zinc-finger.
FT CHAIN 1..465
FT /note="Zinc finger protein STAR3"
FT /id="PRO_0000405573"
FT ZN_FING 229..251
FT /note="C2H2-type 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT ZN_FING 281..314
FT /note="C2H2-type 2; atypical"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT ZN_FING 319..342
FT /note="C2H2-type 3; atypical"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT ZN_FING 347..371
FT /note="C2H2-type 4; atypical"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT REGION 130..173
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 254..284
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 372..400
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 386..390
FT /note="Nuclear localization signal"
FT /evidence="ECO:0000255"
SQ SEQUENCE 465 AA; 50598 MW; 6D181ED0D4D3BD0D CRC64;
MDRDQMTNTM RDQAANLTSM NPLFYPFMAD DALLGMAPPP PQQLLPSVSI QHMDWSPDTM
LDNLTFIEEK IRQVKDVIRS MAGRRASSSS AATPEQQLVN ADLTCLIVQL ISTAGSLLPS
LKNSSFLSRT TPPPAAAAGA AQAVSLAAGE SSSSARNNET NREDEEEQMG SPDYDELFKV
WTNGGAMDEC VGAAGDEQDA RENPAAAAEE EKYEVLQLEE DEILAPHTHF CGICGKGFKR
DANLRMHMRG HGDEYKSAAA LAKPPPPPEG EEQPPQPERR YSCPHAGCKR NRMHASFQPL
KTILCVKNHY KRSHCEKRHV CGRCGAKRFS VMADLKTHEK HCGRDRWLCS CGTSFSRKDK
LFAHVALFQG HAPALPPPPP PPTSGRRRHK QEEPEFTWGG GGGNEFLDVK GIAGVGSGSG
GGDEFFSAGS FGAMDFGFGQ LDASLAMLLP SEQFAGDHQE ENGDK
