OLIG1_RAT
ID OLIG1_RAT Reviewed; 261 AA.
AC Q9WUQ3;
DT 30-AUG-2002, integrated into UniProtKB/Swiss-Prot.
DT 30-AUG-2002, sequence version 2.
DT 03-AUG-2022, entry version 122.
DE RecName: Full=Oligodendrocyte transcription factor 1;
DE Short=Oligo1;
DE AltName: Full=Olg-1 bHLH protein;
GN Name=Olig1;
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Rattus.
OX NCBI_TaxID=10116;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], TISSUE SPECIFICITY, DEVELOPMENTAL STAGE, AND
RP INDUCTION BY SHH.
RC STRAIN=Sprague-Dawley; TISSUE=Brain cortex;
RX PubMed=10719888; DOI=10.1016/s0896-6273(00)80897-1;
RA Lu Q.R., Yuk D.-I., Alberta J.A., Zhu Z., Pawlitzky I., Chan J.A.,
RA McMahon A.P., Stiles C.D., Rowitch D.H.;
RT "Sonic hedgehog-regulated oligodendrocyte lineage genes encoding bHLH
RT proteins in the mammalian central nervous system.";
RL Neuron 25:317-329(2000).
CC -!- FUNCTION: Promotes formation and maturation of oligodendrocytes,
CC especially within the brain. Cooperates with OLIG2 to establish the pMN
CC domain of the embryonic neural tube (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00981}.
CC -!- TISSUE SPECIFICITY: Expressed specifically in the brain, including the
CC corpus callosum, hippocampal and cerebral white matter. Also detected
CC in cells scattered in gray matter, most probably in oligodendrocytes.
CC {ECO:0000269|PubMed:10719888}.
CC -!- DEVELOPMENTAL STAGE: Expressed in oligodendrocytes of the postnatal
CC optical nerve up to day 30, then the number of expressing cells
CC decreases. {ECO:0000269|PubMed:10719888}.
CC -!- INDUCTION: By SHH. {ECO:0000269|PubMed:10719888}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAD34029.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR EMBL; AF151367; AAD34029.1; ALT_INIT; mRNA.
DR RefSeq; NP_068538.2; NM_021770.4.
DR AlphaFoldDB; Q9WUQ3; -.
DR SMR; Q9WUQ3; -.
DR STRING; 10116.ENSRNOP00000002827; -.
DR jPOST; Q9WUQ3; -.
DR PaxDb; Q9WUQ3; -.
DR PRIDE; Q9WUQ3; -.
DR ABCD; Q9WUQ3; 1 sequenced antibody.
DR Ensembl; ENSRNOT00000002827; ENSRNOP00000002827; ENSRNOG00000028648.
DR GeneID; 60394; -.
DR KEGG; rno:60394; -.
DR UCSC; RGD:621129; rat.
DR CTD; 116448; -.
DR RGD; 621129; Olig1.
DR eggNOG; KOG3898; Eukaryota.
DR GeneTree; ENSGT00940000162722; -.
DR HOGENOM; CLU_060337_0_0_1; -.
DR InParanoid; Q9WUQ3; -.
DR OrthoDB; 1205889at2759; -.
DR PhylomeDB; Q9WUQ3; -.
DR TreeFam; TF322733; -.
DR PRO; PR:Q9WUQ3; -.
DR Proteomes; UP000002494; Chromosome 11.
DR Genevisible; Q9WUQ3; RN.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IBA:GO_Central.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0030182; P:neuron differentiation; IBA:GO_Central.
DR GO; GO:0048663; P:neuron fate commitment; ISO:RGD.
DR GO; GO:0014003; P:oligodendrocyte development; ISO:RGD.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR Gene3D; 4.10.280.10; -; 1.
DR InterPro; IPR011598; bHLH_dom.
DR InterPro; IPR036638; HLH_DNA-bd_sf.
DR InterPro; IPR032657; Olig1.
DR PANTHER; PTHR19290:SF7; PTHR19290:SF7; 1.
DR Pfam; PF00010; HLH; 1.
DR SMART; SM00353; HLH; 1.
DR SUPFAM; SSF47459; SSF47459; 1.
DR PROSITE; PS50888; BHLH; 1.
PE 2: Evidence at transcript level;
KW Developmental protein; DNA-binding; Nucleus; Reference proteome;
KW Transcription; Transcription regulation.
FT CHAIN 1..261
FT /note="Oligodendrocyte transcription factor 1"
FT /id="PRO_0000127413"
FT DOMAIN 95..154
FT /note="bHLH"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00981"
FT REGION 41..105
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 41..58
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 83..105
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 261 AA; 27239 MW; C0CE520275550322 CRC64;
MYYAVSQARV NAAPATMLRP QRPGDVQLGA SLYELVGYRQ PPISSSSSTS SSSTASLLPK
PAREKPEAPL AEPRGPAPES GGARADAKEE QQQQQLRRKI NSRERKRMQD LNLAMDALRE
VILPYSAAHC QGAPGRKLSK IATLLLARNY ILLLGSSLQE LRRALGDGAG PAAPRLLLAG
LPLLAAAPGS VLLAPGAVGP PETLRPTKYL SLALDEPPCG QFALPAGGAG SPGLCSCAVC
KFPHLVPAGL GLAAVQAQFS K