OML5_ORYSJ
ID OML5_ORYSJ Reviewed; 811 AA.
AC Q6EQX3; A0A0P0VI75;
DT 31-MAY-2011, integrated into UniProtKB/Swiss-Prot.
DT 16-AUG-2004, sequence version 1.
DT 03-AUG-2022, entry version 112.
DE RecName: Full=Protein MEI2-like 5;
DE Short=OML5;
DE AltName: Full=MEI2-like protein 5;
GN Name=ML5; OrderedLocusNames=Os02g0319100, LOC_Os02g21430;
GN ORFNames=OSJNBa0086N11.15;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16461585; DOI=10.1105/tpc.105.037622;
RA Kawakatsu T., Itoh J., Miyoshi K., Kurata N., Alvarez N., Veit B.,
RA Nagato Y.;
RT "PLASTOCHRON2 regulates leaf initiation and maturation in rice.";
RL Plant Cell 18:612-625(2006).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP GENE FAMILY.
RX PubMed=15356386; DOI=10.1023/b:plan.0000040819.33383.b6;
RA Anderson G.H., Alvarez N.D., Gilman C., Jeffares D.C., Trainor V.C.,
RA Hanson M.R., Veit B.;
RT "Diversification of genes encoding mei2 -like RNA binding proteins in
RT plants.";
RL Plant Mol. Biol. 54:653-670(2004).
CC -!- FUNCTION: Probable RNA-binding protein that may play a role in growth
CC regulation. {ECO:0000250}.
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DR EMBL; AB244280; BAE79767.1; -; mRNA.
DR EMBL; AP005651; BAD28947.1; -; Genomic_DNA.
DR EMBL; AP008208; BAF08593.1; -; Genomic_DNA.
DR EMBL; AP014958; BAS78366.1; -; Genomic_DNA.
DR RefSeq; XP_015625467.1; XM_015769981.1.
DR AlphaFoldDB; Q6EQX3; -.
DR SMR; Q6EQX3; -.
DR STRING; 4530.OS02T0319100-01; -.
DR PaxDb; Q6EQX3; -.
DR PRIDE; Q6EQX3; -.
DR EnsemblPlants; Os02t0319100-01; Os02t0319100-01; Os02g0319100.
DR GeneID; 4329159; -.
DR Gramene; Os02t0319100-01; Os02t0319100-01; Os02g0319100.
DR KEGG; osa:4329159; -.
DR eggNOG; KOG4660; Eukaryota.
DR HOGENOM; CLU_012447_0_0_1; -.
DR InParanoid; Q6EQX3; -.
DR OMA; NNRADNI; -.
DR OrthoDB; 1464915at2759; -.
DR Proteomes; UP000000763; Chromosome 2.
DR Proteomes; UP000059680; Chromosome 2.
DR Genevisible; Q6EQX3; OS.
DR GO; GO:0016607; C:nuclear speck; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0000398; P:mRNA splicing, via spliceosome; IBA:GO_Central.
DR CDD; cd12524; RRM1_MEI2_like; 1.
DR CDD; cd12531; RRM3_MEI2_like; 1.
DR Gene3D; 3.30.70.330; -; 2.
DR InterPro; IPR034453; MEI2-like_RRM1.
DR InterPro; IPR034454; MEI2-like_RRM3.
DR InterPro; IPR007201; Mei2-like_Rrm_C.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR Pfam; PF00076; RRM_1; 2.
DR Pfam; PF04059; RRM_2; 1.
DR SMART; SM00360; RRM; 3.
DR SUPFAM; SSF54928; SSF54928; 2.
DR PROSITE; PS50102; RRM; 2.
PE 2: Evidence at transcript level;
KW Reference proteome; Repeat; RNA-binding.
FT CHAIN 1..811
FT /note="Protein MEI2-like 5"
FT /id="PRO_0000409349"
FT DOMAIN 193..266
FT /note="RRM 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00176"
FT DOMAIN 278..351
FT /note="RRM 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00176"
FT REGION 371..397
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 373..397
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 811 AA; 90295 MW; 0F6FD98D4BE6D6CD CRC64;
MEQREDHTKS SEPAFIPSKR THQMRNIWAW GGPSSTTVNG SSDAVLFSSS LPSVLQFGKL
PGKEREYNAQ PKDDMFPMMK QPGTNARVAD PMDDVAQHLI GNLLPDDEEL LAGVIEDFDH
VKLRTQVEES EEYDVFRNSG GMELDIDPLE SITFGTAKAS LVNGTGSSTN QYSIQNGAGT
VTGEHPYGEH PSRTLFVRNI NSNVEDSELR SLFEPFGDIR SMYTATKHRG FVMISYYDIR
HARNAKTALQ SKPLRRRKLD IHYSIPKENP SDKDMNQGTL VIFNLEPAVS NEELLQIFGA
FGEVREIRET PHKRHHRFIE FYDVRAAESA LRSLNKSDIA GKRVKLEPSR PGGARRSFIQ
HFNHEFEQDE TKHNSFQIGS PSANSPPSLW SQLGSPTDEN KLNALNETAF NGGMSPLGSN
HLSGFSSGYP PMKSPVGKSS YWNNRADNIF HGSPTLHNSH SFPEHHGGII SASPLVSSAA
SSASTASGFT ALTGTSFLWG NNNNLRDHGQ PSSIQSQALS NSLFPNNQPQ RQSNLYQNLR
GSFGASEHFS QFNVGSAPSV FPFESNFGYF SDSPDTSYMR QGKFGGTGPT RVSGSLMTNF
GAYPRINVAS MQNGSVGFEG LLDRGRNQTV GNSGCQEDSR VQYQLDLEKI IAGKDTRTTL
MIKNIPNKYT SNMLLEVIDE THEGTYDFFY LPIDFKNKCN VGYAFINMAS PGYIVSFFKA
FAGRKWEKFN SEKVVSLAYA RIQGKAALVN HFQNSSLMNE DKRCRPMLFD PKHTENNNQI
LLNGIFISMA QQDATQERHD LPENPREDNF S