OMPA_THEMA
ID OMPA_THEMA Reviewed; 400 AA.
AC Q01969;
DT 01-JUL-1993, integrated into UniProtKB/Swiss-Prot.
DT 30-MAY-2000, sequence version 2.
DT 25-MAY-2022, entry version 126.
DE RecName: Full=Outer membrane protein alpha;
DE Flags: Precursor;
GN Name=omp-alpha; OrderedLocusNames=TM_0477;
OS Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826
OS / MSB8).
OC Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.
OX NCBI_TaxID=243274;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND PARTIAL PROTEIN SEQUENCE.
RC STRAIN=ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8;
RX PubMed=1330536; DOI=10.1002/j.1460-2075.1992.tb05537.x;
RA Engel A.M., Cejka Z., Lupas A., Lottspeich F., Baumeister W.;
RT "Isolation and cloning of Omp alpha, a coiled-coil protein spanning the
RT periplasmic space of the ancestral eubacterium Thermotoga maritima.";
RL EMBO J. 11:4369-4378(1992).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8;
RX PubMed=10360571; DOI=10.1038/20601;
RA Nelson K.E., Clayton R.A., Gill S.R., Gwinn M.L., Dodson R.J., Haft D.H.,
RA Hickey E.K., Peterson J.D., Nelson W.C., Ketchum K.A., McDonald L.A.,
RA Utterback T.R., Malek J.A., Linher K.D., Garrett M.M., Stewart A.M.,
RA Cotton M.D., Pratt M.S., Phillips C.A., Richardson D.L., Heidelberg J.F.,
RA Sutton G.G., Fleischmann R.D., Eisen J.A., White O., Salzberg S.L.,
RA Smith H.O., Venter J.C., Fraser C.M.;
RT "Evidence for lateral gene transfer between Archaea and Bacteria from
RT genome sequence of Thermotoga maritima.";
RL Nature 399:323-329(1999).
CC -!- FUNCTION: Links the outer membrane to the inner membrane. Long fibrous
CC protein that could serve to separate the two membranes.
CC -!- SUBUNIT: Homotetramer.
CC -!- SUBCELLULAR LOCATION: Cell outer membrane.
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DR EMBL; X68276; CAA48337.1; -; Genomic_DNA.
DR EMBL; AE000512; AAD35562.1; -; Genomic_DNA.
DR PIR; E72372; E72372.
DR RefSeq; NP_228287.1; NC_000853.1.
DR RefSeq; WP_004081489.1; NZ_CP011107.1.
DR AlphaFoldDB; Q01969; -.
DR SMR; Q01969; -.
DR STRING; 243274.THEMA_02300; -.
DR PRIDE; Q01969; -.
DR EnsemblBacteria; AAD35562; AAD35562; TM_0477.
DR KEGG; tma:TM0477; -.
DR eggNOG; COG1196; Bacteria.
DR InParanoid; Q01969; -.
DR OMA; DHWAYEY; -.
DR OrthoDB; 554219at2; -.
DR Proteomes; UP000008183; Chromosome.
DR GO; GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR InterPro; IPR001119; SLH_dom.
DR Pfam; PF00395; SLH; 1.
DR PROSITE; PS51272; SLH; 1.
PE 1: Evidence at protein level;
KW Cell outer membrane; Coiled coil; Direct protein sequencing; Membrane;
KW Reference proteome; Repeat; Signal; Transmembrane; Transmembrane helix.
FT SIGNAL 1..20
FT CHAIN 21..400
FT /note="Outer membrane protein alpha"
FT /id="PRO_0000032645"
FT TRANSMEM 380..400
FT /note="Helical"
FT /evidence="ECO:0000255"
FT DOMAIN 21..81
FT /note="SLH"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00777"
FT REPEAT 208..232
FT /note="1"
FT REPEAT 251..275
FT /note="2"
FT REPEAT 326..350
FT /note="3"
FT REGION 208..350
FT /note="3 X 25 AA approximate repeat"
FT COILED 85..379
FT /evidence="ECO:0000255"
FT CONFLICT 179
FT /note="V -> A (in Ref. 1; CAA48337)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 400 AA; 45339 MW; F7C7EB0E80935583 CRC64;
MKRVLLTVAM LSVFFSAMFA FFPDVPKDHW AYEYVWKLWQ RGIFIGYPDG EFKGDRYITR
YEAATAVSRL LDFIEQKMLA GASGDLAQVV GNLSDKYMAL EEKVNGLTGI LDTLASQIGT
TQANLTETER ELLEKIDAVK EEIEMEFDKE ISLNREVVNN IGLKLGNLSR DYERYKENVD
AKISEVNEKL AALEKDLGNK IADLEGIVNL HEKDIINIYN KISSVNEELN NKIAATEEKL
SRKDEEISAM VELHEKDIIN LYNKVAALNE DLNKKILDTK AELSAKIESQ EKTLNMVYTK
LLDTESKLND EISALKEKDA EIQKTVDLHE QDIVNLYGKT SSLEEDLNMK YNETNEKIDQ
VKAELEDKIE SVKAYNRNLS ILTGAFFGIL GLILIAISGK